RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 BCS1LQ9Y276 419 aa19.91■□□□□ 0.78
SHMT2-204ENST00000553324 MAP3K15Q6ZN16 1313 aa19.91■□□□□ 0.78
SHMT2-204ENST00000553324 H0YIN7 160 aa19.9■□□□□ 0.78
SHMT2-204ENST00000553324 ST5P78524 1137 aa19.9■□□□□ 0.78
SHMT2-204ENST00000553324 PDIA6Q15084 440 aa19.9■□□□□ 0.78
SHMT2-204ENST00000553324 DALRD3Q5D0E6 543 aaKnown RBP19.9■□□□□ 0.78
SHMT2-204ENST00000553324 NBPF5PQ86XG9 351 aaPredicted RBP19.9■□□□□ 0.78
SHMT2-204ENST00000553324 FAM9BQ8IZU0 186 aa19.9■□□□□ 0.78
SHMT2-204ENST00000553324 DDX21Q9NR30 783 aaKnown RBP eCLIP19.9■□□□□ 0.78
SHMT2-204ENST00000553324 HLFQ16534 295 aa19.89■□□□□ 0.77
SHMT2-204ENST00000553324 HDGFL1Q5TGJ6 251 aa19.89■□□□□ 0.77
SHMT2-204ENST00000553324 DUSP27Q5VZP5 1158 aa19.89■□□□□ 0.77
SHMT2-204ENST00000553324 PRR5LQ6MZQ0 368 aa19.89■□□□□ 0.77
SHMT2-204ENST00000553324 WWC3Q9ULE0 1092 aa19.89■□□□□ 0.77
SHMT2-204ENST00000553324 IL16Q14005 1332 aa19.88■□□□□ 0.77
SHMT2-204ENST00000553324 KRT24Q2M2I5 525 aa19.88■□□□□ 0.77
SHMT2-204ENST00000553324 TTLL7Q6ZT98 887 aa19.88■□□□□ 0.77
SHMT2-204ENST00000553324 DBF4Q9UBU7 674 aaPredicted RBP19.88■□□□□ 0.77
SHMT2-204ENST00000553324 KIF13BQ9NQT8 1826 aa19.88■□□□□ 0.77
SHMT2-204ENST00000553324 CHRNA5P30532 468 aa19.87■□□□□ 0.77
SHMT2-204ENST00000553324 LRP10Q7Z4F1 713 aa19.87■□□□□ 0.77
SHMT2-204ENST00000553324 C2CD5Q86YS7 1000 aa19.87■□□□□ 0.77
SHMT2-204ENST00000553324 NECTIN2Q92692 538 aa19.87■□□□□ 0.77
SHMT2-204ENST00000553324 NYXQ9GZU5 481 aa19.87■□□□□ 0.77
SHMT2-204ENST00000553324 GTF2E1P29083 439 aaPredicted RBP19.86■□□□□ 0.77
SHMT2-204ENST00000553324 GIGYF2Q6Y7W6 1299 aaKnown RBP19.86■□□□□ 0.77
SHMT2-204ENST00000553324 WDR63Q8IWG1 891 aa19.86■□□□□ 0.77
SHMT2-204ENST00000553324 LAMB4A4D0S4 1761 aa19.85■□□□□ 0.77
SHMT2-204ENST00000553324 HSP90AB3PQ58FF7 597 aa19.85■□□□□ 0.77
SHMT2-204ENST00000553324 COPS6Q7L5N1 327 aa19.85■□□□□ 0.77
SHMT2-204ENST00000553324 TTLL6Q8N841 843 aa19.85■□□□□ 0.77
SHMT2-204ENST00000553324 ZBTB3Q9H5J0 574 aa19.85■□□□□ 0.77
SHMT2-204ENST00000553324 HYPKQ9NX55 129 aa19.85■□□□□ 0.77
SHMT2-204ENST00000553324 SCN7AQ01118 1682 aa19.84■□□□□ 0.77
SHMT2-204ENST00000553324 PROSER3Q2NL68 480 aa19.84■□□□□ 0.77
SHMT2-204ENST00000553324 ARHGAP27Q6ZUM4 889 aa19.84■□□□□ 0.77
SHMT2-204ENST00000553324 CHPF2Q9P2E5 772 aa19.84■□□□□ 0.77
SHMT2-204ENST00000553324 ANXA1P04083 346 aa19.83■□□□□ 0.77
SHMT2-204ENST00000553324 AIMP1Q12904 312 aaKnown RBP19.83■□□□□ 0.77
SHMT2-204ENST00000553324 PARP10Q53GL7 1025 aa19.83■□□□□ 0.77
SHMT2-204ENST00000553324 XAGE3Q8WTP9 111 aa19.83■□□□□ 0.77
SHMT2-204ENST00000553324 NRXN2Q9P2S2 1712 aa19.82■□□□□ 0.76
SHMT2-204ENST00000553324 CCDC30Q5VVM6 783 aa19.82■□□□□ 0.76
SHMT2-204ENST00000553324 PPP1R42Q7Z4L9 355 aa19.82■□□□□ 0.76
SHMT2-204ENST00000553324 ZNF34Q8IZ26 560 aa19.82■□□□□ 0.76
SHMT2-204ENST00000553324 ZNF622Q969S3 477 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHMT2-204ENST00000553324 ATP10DQ9P241 1426 aa19.82■□□□□ 0.76
SHMT2-204ENST00000553324 CCER2I3L3R5 266 aa19.81■□□□□ 0.76
SHMT2-204ENST00000553324 ELL2O00472 640 aaPredicted RBP19.81■□□□□ 0.76
SHMT2-204ENST00000553324 CCDC24Q8N4L8 307 aa19.81■□□□□ 0.76
SHMT2-204ENST00000553324 C8orf58Q8NAV2 365 aa19.81■□□□□ 0.76
SHMT2-204ENST00000553324 CNKSR1Q969H4 720 aa19.81■□□□□ 0.76
SHMT2-204ENST00000553324 SALL2Q9Y467 1007 aaPredicted RBP19.81■□□□□ 0.76
SHMT2-204ENST00000553324 KLRG2A4D1S0 409 aaPredicted RBP19.8■□□□□ 0.76
SHMT2-204ENST00000553324 FAM177BA6PVY3 158 aa19.8■□□□□ 0.76
SHMT2-204ENST00000553324 SRGNP10124 158 aa19.8■□□□□ 0.76
SHMT2-204ENST00000553324 STYK1Q6J9G0 422 aa19.8■□□□□ 0.76
SHMT2-204ENST00000553324 ANKRD13DQ6ZTN6 518 aa19.8■□□□□ 0.76
SHMT2-204ENST00000553324 ZNF784Q8NCA9 323 aaPredicted RBP19.8■□□□□ 0.76
SHMT2-204ENST00000553324 MASTLQ96GX5 879 aa19.8■□□□□ 0.76
SHMT2-204ENST00000553324 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
SHMT2-204ENST00000553324 GPTP24298 496 aa19.79■□□□□ 0.76
SHMT2-204ENST00000553324 TCIRG1Q13488 830 aa19.79■□□□□ 0.76
SHMT2-204ENST00000553324 PLBD2Q8NHP8 589 aa19.79■□□□□ 0.76
SHMT2-204ENST00000553324 BCORQ6W2J9 1755 aa19.79■□□□□ 0.76
SHMT2-204ENST00000553324 AFDNP55196 1824 aaKnown RBP19.79■□□□□ 0.76
SHMT2-204ENST00000553324 N4BP2Q86UW6 1770 aaPredicted RBP19.78■□□□□ 0.76
SHMT2-204ENST00000553324 SUSD4Q5VX71 490 aa19.78■□□□□ 0.76
SHMT2-204ENST00000553324 TSR2Q969E8 191 aaKnown RBP19.78■□□□□ 0.76
SHMT2-204ENST00000553324 IBTKQ9P2D0 1353 aaPredicted RBP19.78■□□□□ 0.76
SHMT2-204ENST00000553324 CHD4Q14839 1912 aa19.78■□□□□ 0.76
SHMT2-204ENST00000553324 KIAA1551Q9HCM1 1747 aa19.77■□□□□ 0.76
SHMT2-204ENST00000553324 NPR1P16066 1061 aa19.77■□□□□ 0.76
SHMT2-204ENST00000553324 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
SHMT2-204ENST00000553324 UTP14AQ9BVJ6 771 aaKnown RBP19.77■□□□□ 0.76
SHMT2-204ENST00000553324 RNF123Q5XPI4 1314 aa19.76■□□□□ 0.75
SHMT2-204ENST00000553324 UBN2Q6ZU65 1347 aa19.76■□□□□ 0.75
SHMT2-204ENST00000553324 ALDH1B1P30837 517 aa19.76■□□□□ 0.75
SHMT2-204ENST00000553324 TWISTNBQ3B726 338 aaPredicted RBP19.76■□□□□ 0.75
SHMT2-204ENST00000553324 MYH16Q9H6N6 1097 aa19.76■□□□□ 0.75
SHMT2-204ENST00000553324 DDX58O95786 925 aaKnown RBP19.75■□□□□ 0.75
SHMT2-204ENST00000553324 SOGA3Q5TF21 947 aa19.75■□□□□ 0.75
SHMT2-204ENST00000553324 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
SHMT2-204ENST00000553324 STK31Q9BXU1 1019 aa19.75■□□□□ 0.75
SHMT2-204ENST00000553324 ERFEQ4G0M1 354 aa19.74■□□□□ 0.75
SHMT2-204ENST00000553324 RIC3Q7Z5B4 369 aa19.74■□□□□ 0.75
SHMT2-204ENST00000553324 NUTM1Q86Y26 1132 aa19.74■□□□□ 0.75
SHMT2-204ENST00000553324 NTSR2O95665 410 aa19.73■□□□□ 0.75
SHMT2-204ENST00000553324 SLC10A5Q5PT55 438 aa19.73■□□□□ 0.75
SHMT2-204ENST00000553324 NLRP10Q86W26 655 aa19.73■□□□□ 0.75
SHMT2-204ENST00000553324 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
SHMT2-204ENST00000553324 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
SHMT2-204ENST00000553324 TRIM28Q13263 835 aaKnown RBP19.72■□□□□ 0.75
SHMT2-204ENST00000553324 CRY2Q49AN0 593 aa19.72■□□□□ 0.75
SHMT2-204ENST00000553324 DIEXFQ68CQ4 756 aaKnown RBP19.72■□□□□ 0.75
SHMT2-204ENST00000553324 C21orf2O43822 256 aa19.71■□□□□ 0.75
SHMT2-204ENST00000553324 PRPF40BQ6NWY9 871 aaKnown RBP19.71■□□□□ 0.75
SHMT2-204ENST00000553324 PHAXQ9H814 394 aaKnown RBP19.71■□□□□ 0.75
SHMT2-204ENST00000553324 TRMT112Q9UI30 125 aaKnown RBP19.71■□□□□ 0.75
SHMT2-204ENST00000553324 C9orf131Q5VYM1 1079 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms