RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 MICAL1Q8TDZ2 1067 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 ARHGEF1Q92888 912 aaKnown RBP6.14□□□□□ -1.43
PFDN5-219ENST00000553171 COL25A1Q9BXS0 654 aaPredicted RBP6.14□□□□□ -1.43
PFDN5-219ENST00000553171 IGSF5Q9NSI5 407 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 GOLGA6AQ9NYA3 693 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 CEP126Q9P2H0 1117 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 COLQQ9Y215 455 aaPredicted RBP6.14□□□□□ -1.43
PFDN5-219ENST00000553171 FRMD4BQ9Y2L6 1034 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 SSH2Q76I76 1423 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 COL6A3P12111 3177 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 TRIOBPQ9H2D6 2365 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 NUTM2FA1L443 756 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 IRF6O14896 467 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 ZNF500O60304 480 aaPredicted RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 ECM2O94769 699 aaPredicted RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 KIF20AO95235 890 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 SSFA2P28290 1259 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 PLA2G5P39877 138 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 EVA1CP58658 441 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 ZRSR2Q15696 482 aaKnown RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 DNTTIP2Q5QJE6 756 aaKnown RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 ZFYVE27Q5T4F4 411 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 CCDC181Q5TID7 509 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 LARP1Q6PKG0 1096 aaKnown RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 ARHGAP27Q6ZUM4 889 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 DDX46Q7L014 1031 aaKnown RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 IFNLR1Q8IU57 520 aaPredicted RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 MARCH10Q8NA82 808 aaPredicted RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 CCDC85AQ96PX6 553 aaPredicted RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 SLC24A3Q9HC58 644 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 JADE2Q9NQC1 790 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 BMP2KQ9NSY1 1161 aaPredicted RBP6.13□□□□□ -1.43
PFDN5-219ENST00000553171 TRPC6Q9Y210 931 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 WASHC2AQ641Q2 1341 aa6.13□□□□□ -1.43
PFDN5-219ENST00000553171 RGL2O15211 777 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 DHX16O60231 1041 aaKnown RBP6.12□□□□□ -1.43
PFDN5-219ENST00000553171 PPFIA4O75335 1185 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 SCP2P22307 547 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 KIF1AQ12756 1690 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 MKRN3Q13064 507 aaKnown RBP6.12□□□□□ -1.43
PFDN5-219ENST00000553171 DDB1Q16531 1140 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 PPP4R3BQ5MIZ7 849 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 SMC5Q8IY18 1101 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 DRC1Q96MC2 740 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 TFCP2L1Q9NZI6 479 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 PHF8Q9UPP1 1060 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 MRVI1Q9Y6F6 885 aa6.12□□□□□ -1.43
PFDN5-219ENST00000553171 SH3BP5O60239 455 aa6.11□□□□□ -1.43
PFDN5-219ENST00000553171 COL9A1P20849 921 aa6.11□□□□□ -1.43
PFDN5-219ENST00000553171 IRF5Q13568 498 aa6.11□□□□□ -1.43
PFDN5-219ENST00000553171 CHRNA2Q15822 529 aa6.11□□□□□ -1.43
PFDN5-219ENST00000553171 RETREG2Q8NC44 543 aa6.11□□□□□ -1.43
PFDN5-219ENST00000553171 METTL14Q9HCE5 456 aaKnown RBP6.11□□□□□ -1.43
PFDN5-219ENST00000553171 NAIPQ13075 1403 aa6.1□□□□□ -1.43
PFDN5-219ENST00000553171 ERBINQ96RT1 1412 aa6.1□□□□□ -1.43
PFDN5-219ENST00000553171 KIAA0232Q92628 1395 aa6.1□□□□□ -1.43
PFDN5-219ENST00000553171 RASSF10A6NK89 507 aa6.1□□□□□ -1.43
PFDN5-219ENST00000553171 EPB41L2O43491 1005 aaKnown RBP6.1□□□□□ -1.43
PFDN5-219ENST00000553171 TPM2P07951 284 aa6.1□□□□□ -1.43
PFDN5-219ENST00000553171 CLEC4GQ6UXB4 293 aa6.1□□□□□ -1.43
PFDN5-219ENST00000553171 ZNF513Q8N8E2 541 aaPredicted RBP6.1□□□□□ -1.43
PFDN5-219ENST00000553171 BEGAINQ9BUH8 593 aa6.1□□□□□ -1.43
PFDN5-219ENST00000553171 PASKQ96RG2 1323 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 WDR33Q9C0J8 1336 aaKnown RBP6.09□□□□□ -1.43
PFDN5-219ENST00000553171 TMEM88BA6NKF7 163 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 POTECB2RU33 542 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 CREB3O43889 395 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 TRAK2O60296 914 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 PEX14O75381 377 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 EIF3JO75822 258 aaKnown RBP6.09□□□□□ -1.43
PFDN5-219ENST00000553171 COPB2P35606 906 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 FLIIQ13045 1269 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 DEFB115Q30KQ5 88 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 SLC27A3Q5K4L6 730 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 ZKSCAN2Q63HK3 967 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 MSL1Q68DK7 614 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 COL23A1Q86Y22 540 aaPredicted RBP6.09□□□□□ -1.43
PFDN5-219ENST00000553171 BANK1Q8NDB2 785 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 EVI5LQ96CN4 794 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 SIRT1Q96EB6 747 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 FAM210AQ96ND0 272 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 PAIP2Q9BPZ3 127 aaKnown RBP6.09□□□□□ -1.43
PFDN5-219ENST00000553171 ZBTB47Q9UFB7 747 aaPredicted RBP6.09□□□□□ -1.43
PFDN5-219ENST00000553171 PNMA2Q9UL42 364 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 CASP8AP2Q9UKL3 1982 aa6.09□□□□□ -1.43
PFDN5-219ENST00000553171 PKD1L2Q7Z442 2459 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 FMN2Q9NZ56 1722 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 GLTPD2A6NH11 291 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 VGLL3A8MV65 326 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 RHBDL3P58872 404 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 KCNA1Q09470 495 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 GET4Q7L5D6 327 aaPredicted RBP6.08□□□□□ -1.44
PFDN5-219ENST00000553171 MTERF4Q7Z6M4 381 aaKnown RBP6.08□□□□□ -1.44
PFDN5-219ENST00000553171 ZCRB1Q8TBF4 217 aaKnown RBP6.08□□□□□ -1.44
PFDN5-219ENST00000553171 ZC3H15Q8WU90 426 aaKnown RBP6.08□□□□□ -1.44
PFDN5-219ENST00000553171 FAM122AQ96E09 287 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 MAF1Q9H063 256 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 ABCF2Q9UG63 623 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 SYNPO2Q9UMS6 1093 aa6.08□□□□□ -1.44
PFDN5-219ENST00000553171 NRXN1Q9ULB1 1477 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms