RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	HDGFL1	Q5TGJ6	251 aa		13.14	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	CLEC4G	Q6UXB4	293 aa		13.14	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	NLGN2	Q8NFZ4	835 aa		13.14	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	CHPF2	Q9P2E5	772 aa		13.14	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	SALL2	Q9Y467	1007 aa	Predicted RBP	13.14	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	CARMIL3	Q8ND23	1372 aa		13.14	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	MAP3K15	Q6ZN16	1313 aa		13.13	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	EIF2S2	P20042	333 aa	Known RBP	13.13	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	HLF	Q16534	295 aa		13.13	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	TRMT2A	Q8IZ69	625 aa	Known RBP	13.13	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	MYL6B	P14649	208 aa		13.12	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	DBF4	Q9UBU7	674 aa	Predicted RBP	13.12	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.12	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	AFDN	P55196	1824 aa	Known RBP	13.11	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.11	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	VAMP4	O75379	141 aa		13.11	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	XAGE3	Q8WTP9	111 aa		13.11	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	NECTIN2	Q92692	538 aa		13.11	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	UBN2	Q6ZU65	1347 aa		13.11	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	ELL2	O00472	640 aa	Predicted RBP	13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	SERPINB2	P05120	415 aa		13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	EXOSC9	Q06265	439 aa	Known RBP	13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	SLFN5	Q08AF3	891 aa		13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	TWISTNB	Q3B726	338 aa	Predicted RBP	13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	COPS6	Q7L5N1	327 aa		13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	ZNF34	Q8IZ26	560 aa		13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	MYH16	Q9H6N6	1097 aa		13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	PARP3	Q9Y6F1	533 aa		13.1	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	KCNA3	P22001	575 aa		13.09	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	GOLGA2	Q08379	1002 aa		13.09	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	RIC1	Q4ADV7	1423 aa		13.09	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	PRR5L	Q6MZQ0	368 aa		13.09	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	ANKRD31	Q8N7Z5	1873 aa		13.09	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	CDCA7L	Q96GN5	454 aa		13.09	□□□□□ -0.31
CALCOCO1-222	ENST00000553154	GOLGB1	Q14789	3259 aa	Known RBP	13.09	□□□□□ -0.31
CALCOCO1-222	ENST00000553154		E9PSI1	815 aa		13.08	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ZBTB3	Q9H5J0	574 aa		13.08	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	HYPK	Q9NX55	129 aa		13.08	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ZNF652	Q9Y2D9	606 aa		13.08	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	BRCA1	P38398	1863 aa	Known RBP	13.08	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ABCC12	Q96J65	1359 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ANKRD36C	Q5JPF3	1778 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	DLEC1	Q9Y238	1755 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	NUP98	P52948	1817 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	TGFB2	P61812	414 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	CCDC30	Q5VVM6	783 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	KIF6	Q6ZMV9	814 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	BICDL1	Q6ZP65	573 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	PLBD2	Q8NHP8	589 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	PHAX	Q9H814	394 aa	Known RBP	13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	COL11A2	P13942	1736 aa	Predicted RBP	13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ARFGEF2	Q9Y6D5	1785 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ADCY9	O60503	1353 aa		13.07	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	KLRG2	A4D1S0	409 aa	Predicted RBP	13.06	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	NTSR2	O95665	410 aa		13.06	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	SETDB2	Q96T68	719 aa		13.06	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	DPEP1	P16444	411 aa		13.05	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	YBX3	P16989	372 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	TCIRG1	Q13488	830 aa		13.05	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	G2E3	Q7L622	706 aa		13.05	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	NPM2	Q86SE8	214 aa	Known RBP	13.05	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ISCA1	Q9BUE6	129 aa		13.05	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	AIMP1	Q12904	312 aa	Known RBP	13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	TRIM28	Q13263	835 aa	Known RBP	13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	SUSD4	Q5VX71	490 aa		13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ANKRD13D	Q6ZTN6	518 aa		13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	KLHL34	Q8N239	644 aa		13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	CNBD1	Q8NA66	436 aa		13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	BRIP1	Q9BX63	1249 aa		13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	CHMP4A	Q9BY43	222 aa		13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.04	□□□□□ -0.32
CALCOCO1-222	ENST00000553154		A0A0G2JLW4	131 aa		13.03	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	TCERG1	O14776	1098 aa	Known RBP	13.03	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	CHRNA5	P30532	468 aa		13.03	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	PARP10	Q53GL7	1025 aa		13.03	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	NLRP10	Q86W26	655 aa		13.03	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	ZBED9	Q6R2W3	1325 aa		13.03	□□□□□ -0.32
CALCOCO1-222	ENST00000553154	GPT	P24298	496 aa		13.02	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	CRY2	Q49AN0	593 aa		13.02	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	HSP90AB3P	Q58FF7	597 aa		13.02	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.02	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	CCDC24	Q8N4L8	307 aa		13.02	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	RNF123	Q5XPI4	1314 aa		13.02	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	SLC4A2	P04920	1241 aa		13.01	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.01	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	FLII	Q13045	1269 aa		13.01	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	SLC10A5	Q5PT55	438 aa		13.01	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	STK31	Q9BXU1	1019 aa		13.01	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	CHD4	Q14839	1912 aa		13	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	SNED1	Q8TER0	1413 aa		13	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	IGKV5-2	P06315	115 aa		13	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	SRGN	P10124	158 aa		13	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	ERFE	Q4G0M1	354 aa		13	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	KSR2	Q6VAB6	950 aa		13	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	TPTE2	Q6XPS3	522 aa		13	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	C3orf67	Q6ZVT6	689 aa		13	□□□□□ -0.33
CALCOCO1-222	ENST00000553154	ZNF428	Q96B54	188 aa		13	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 158 ms