RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 FIGNL1Q6PIW4 674 aa5.94□□□□□ -1.46
NPAS3-212ENST00000552696 LRRC69Q6ZNQ3 347 aa5.94□□□□□ -1.46
NPAS3-212ENST00000552696 RETREG2Q8NC44 543 aa5.94□□□□□ -1.46
NPAS3-212ENST00000552696 ABHD17AQ96GS6 310 aa5.94□□□□□ -1.46
NPAS3-212ENST00000552696 CNTNAP3BQ96NU0 1288 aa5.94□□□□□ -1.46
NPAS3-212ENST00000552696 MKNK1Q9BUB5 465 aa5.94□□□□□ -1.46
NPAS3-212ENST00000552696 CNTNAP3Q9BZ76 1288 aa5.94□□□□□ -1.46
NPAS3-212ENST00000552696 ZCCHC2Q9C0B9 1178 aaKnown RBP5.94□□□□□ -1.46
NPAS3-212ENST00000552696 QTRT2Q9H974 415 aaKnown RBP5.94□□□□□ -1.46
NPAS3-212ENST00000552696 DCDC2BA2VCK2 349 aa5.93□□□□□ -1.46
NPAS3-212ENST00000552696 ATXN7O15265 892 aaPredicted RBP5.93□□□□□ -1.46
NPAS3-212ENST00000552696 BNIP3LO60238 219 aa5.93□□□□□ -1.46
NPAS3-212ENST00000552696 NDFIP2Q9NV92 336 aa5.93□□□□□ -1.46
NPAS3-212ENST00000552696 USTQ9Y2C2 406 aa5.93□□□□□ -1.46
NPAS3-212ENST00000552696 PCDHGC4Q9Y5F7 938 aa5.93□□□□□ -1.46
NPAS3-212ENST00000552696 FAM157BP0CG42 384 aa5.92□□□□□ -1.46
NPAS3-212ENST00000552696 SAMD5Q5TGI4 173 aa5.92□□□□□ -1.46
NPAS3-212ENST00000552696 CAPN12Q6ZSI9 719 aa5.92□□□□□ -1.46
NPAS3-212ENST00000552696 ZNF280CQ8ND82 737 aa5.92□□□□□ -1.46
NPAS3-212ENST00000552696 SUSD3Q96L08 255 aa5.92□□□□□ -1.46
NPAS3-212ENST00000552696 NEUROD4Q9HD90 331 aa5.92□□□□□ -1.46
NPAS3-212ENST00000552696 ATXN7L1Q9ULK2 861 aaPredicted RBP5.92□□□□□ -1.46
NPAS3-212ENST00000552696 PHF24Q9UPV7 400 aa5.92□□□□□ -1.46
NPAS3-212ENST00000552696 KHNYNO15037 678 aaKnown RBP5.91□□□□□ -1.46
NPAS3-212ENST00000552696 MX2P20592 715 aa5.91□□□□□ -1.46
NPAS3-212ENST00000552696 FGFR3P22607 806 aa5.91□□□□□ -1.46
NPAS3-212ENST00000552696 DGKZQ13574 1117 aa5.91□□□□□ -1.46
NPAS3-212ENST00000552696 MYO19Q96H55 970 aa5.91□□□□□ -1.46
NPAS3-212ENST00000552696 CFHR5Q9BXR6 569 aa5.91□□□□□ -1.46
NPAS3-212ENST00000552696 MBIPQ9NS73 344 aa5.91□□□□□ -1.46
NPAS3-212ENST00000552696 KLK14Q9P0G3 267 aa5.91□□□□□ -1.46
NPAS3-212ENST00000552696 HCN2Q9UL51 889 aa5.91□□□□□ -1.46
NPAS3-212ENST00000552696 EFSO43281 561 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 MAPTP10636 758 aaKnown RBP5.9□□□□□ -1.46
NPAS3-212ENST00000552696 SSFA2P28290 1259 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 SCNN1AP37088 669 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 TNP2Q05952 138 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 TYRO3Q06418 890 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 HIF1AQ16665 826 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 COL26A1Q96A83 441 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 SAP130Q9H0E3 1048 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 ANKIB1Q9P2G1 1089 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 BCS1LQ9Y276 419 aa5.9□□□□□ -1.46
NPAS3-212ENST00000552696 TGFBR3LH3BV60 316 aa5.89□□□□□ -1.47
NPAS3-212ENST00000552696 PTCD1O75127 700 aaKnown RBP5.89□□□□□ -1.47
NPAS3-212ENST00000552696 ADAMTS2O95450 1211 aa5.89□□□□□ -1.47
NPAS3-212ENST00000552696 CD33P20138 364 aa5.89□□□□□ -1.47
NPAS3-212ENST00000552696 NAA30Q147X3 362 aaPredicted RBP5.89□□□□□ -1.47
NPAS3-212ENST00000552696 COX20Q5RI15 118 aa5.89□□□□□ -1.47
NPAS3-212ENST00000552696 CEP63Q96MT8 703 aa5.89□□□□□ -1.47
NPAS3-212ENST00000552696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.89□□□□□ -1.47
NPAS3-212ENST00000552696 SEPT3Q9UH03 358 aa5.89□□□□□ -1.47
NPAS3-212ENST00000552696 LRFN2Q9ULH4 789 aa5.89□□□□□ -1.47
NPAS3-212ENST00000552696 IGF1RP08069 1367 aa5.89□□□□□ -1.47
NPAS3-212ENST00000552696 BMP4P12644 408 aa5.88□□□□□ -1.47
NPAS3-212ENST00000552696 INSM1Q01101 510 aaPredicted RBP5.88□□□□□ -1.47
NPAS3-212ENST00000552696 CTBSQ01459 385 aa5.88□□□□□ -1.47
NPAS3-212ENST00000552696 SRSF11Q05519 484 aaKnown RBP5.88□□□□□ -1.47
NPAS3-212ENST00000552696 IER5Q5VY09 327 aa5.88□□□□□ -1.47
NPAS3-212ENST00000552696 PHLDB3Q6NSJ2 640 aa5.88□□□□□ -1.47
NPAS3-212ENST00000552696 C16orf46Q6P387 395 aa5.88□□□□□ -1.47
NPAS3-212ENST00000552696 BTLAQ7Z6A9 289 aa5.88□□□□□ -1.47
NPAS3-212ENST00000552696 BRD7Q9NPI1 651 aa5.88□□□□□ -1.47
NPAS3-212ENST00000552696 STRN4Q9NRL3 753 aa5.88□□□□□ -1.47
NPAS3-212ENST00000552696 C2CD2LO14523 706 aa5.87□□□□□ -1.47
NPAS3-212ENST00000552696 TNFRSF10BO14763 440 aa5.87□□□□□ -1.47
NPAS3-212ENST00000552696 SLURP2P0DP57 97 aa5.87□□□□□ -1.47
NPAS3-212ENST00000552696 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
NPAS3-212ENST00000552696 SFSWAPQ12872 951 aaKnown RBP5.87□□□□□ -1.47
NPAS3-212ENST00000552696 GRIN2CQ14957 1233 aa5.87□□□□□ -1.47
NPAS3-212ENST00000552696 C11orf91Q3C1V1 193 aa5.87□□□□□ -1.47
NPAS3-212ENST00000552696 MARK1Q9P0L2 795 aa5.87□□□□□ -1.47
NPAS3-212ENST00000552696 NSFL1CQ9UNZ2 370 aaKnown RBP5.87□□□□□ -1.47
NPAS3-212ENST00000552696 MAP2K3P46734 347 aa5.86□□□□□ -1.47
NPAS3-212ENST00000552696 IDH3AP50213 366 aa5.86□□□□□ -1.47
NPAS3-212ENST00000552696 LAMC2Q13753 1193 aa5.86□□□□□ -1.47
NPAS3-212ENST00000552696 B4GALNT3Q6L9W6 998 aa5.86□□□□□ -1.47
NPAS3-212ENST00000552696 ZSCAN1Q8NBB4 408 aa5.86□□□□□ -1.47
NPAS3-212ENST00000552696 WHAMMQ8TF30 809 aa5.86□□□□□ -1.47
NPAS3-212ENST00000552696 IFT43Q96FT9 208 aa5.86□□□□□ -1.47
NPAS3-212ENST00000552696 DMGDHQ9UI17 866 aaKnown RBP5.86□□□□□ -1.47
NPAS3-212ENST00000552696 MICAL2O94851 1124 aa5.85□□□□□ -1.47
NPAS3-212ENST00000552696 FAM26DQ5JW98 314 aa5.85□□□□□ -1.47
NPAS3-212ENST00000552696 FAM182BQ5T319 152 aa5.85□□□□□ -1.47
NPAS3-212ENST00000552696 ZNF385CQ66K41 422 aaPredicted RBP5.85□□□□□ -1.47
NPAS3-212ENST00000552696 ETFBKMTQ8IXQ9 262 aa5.85□□□□□ -1.47
NPAS3-212ENST00000552696 ACDQ96AP0 544 aa5.85□□□□□ -1.47
NPAS3-212ENST00000552696 ARSDP51689 593 aa5.84□□□□□ -1.47
NPAS3-212ENST00000552696 KCNQ4P56696 695 aa5.84□□□□□ -1.47
NPAS3-212ENST00000552696 PDE4CQ08493 712 aa5.84□□□□□ -1.47
NPAS3-212ENST00000552696 TREML1Q86YW5 311 aa5.84□□□□□ -1.47
NPAS3-212ENST00000552696 SVOPQ8N4V2 548 aa5.84□□□□□ -1.47
NPAS3-212ENST00000552696 HELQQ8TDG4 1101 aa5.84□□□□□ -1.47
NPAS3-212ENST00000552696 OXCT2Q9BYC2 517 aaPredicted RBP5.84□□□□□ -1.47
NPAS3-212ENST00000552696 STK17AQ9UEE5 414 aa5.84□□□□□ -1.47
NPAS3-212ENST00000552696 KCNH4Q9UQ05 1017 aa5.84□□□□□ -1.47
NPAS3-212ENST00000552696 CELA2BP08218 269 aaPredicted RBP5.83□□□□□ -1.48
NPAS3-212ENST00000552696 BRD2P25440 801 aaKnown RBP5.83□□□□□ -1.48
NPAS3-212ENST00000552696 GRNP28799 593 aaKnown RBP5.83□□□□□ -1.48
NPAS3-212ENST00000552696 INPP5BP32019 993 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms