RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 MAPK8IP3Q9UPT6 1336 aa15.2■□□□□ 0.02
CPNE8-207ENST00000550863 H0YIN7 160 aa15.2■□□□□ 0.02
CPNE8-207ENST00000550863 HTATSF1O43719 755 aaKnown RBP15.2■□□□□ 0.02
CPNE8-207ENST00000550863 HSPA6P17066 643 aa15.2■□□□□ 0.02
CPNE8-207ENST00000550863 SLC51AQ86UW1 340 aa15.2■□□□□ 0.02
CPNE8-207ENST00000550863 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
CPNE8-207ENST00000550863 SETDB2Q96T68 719 aa15.2■□□□□ 0.02
CPNE8-207ENST00000550863 RRP7AQ9Y3A4 280 aaKnown RBP15.2■□□□□ 0.02
CPNE8-207ENST00000550863 TAF1P21675 1872 aa15.19■□□□□ 0.02
CPNE8-207ENST00000550863 C21orf2O43822 256 aa15.19■□□□□ 0.02
CPNE8-207ENST00000550863 NPHP1O15259 732 aa15.18■□□□□ 0.02
CPNE8-207ENST00000550863 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
CPNE8-207ENST00000550863 HTRA3P83110 453 aa15.18■□□□□ 0.02
CPNE8-207ENST00000550863 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
CPNE8-207ENST00000550863 BRIP1Q9BX63 1249 aa15.18■□□□□ 0.02
CPNE8-207ENST00000550863 MYL6BP14649 208 aa15.17■□□□□ 0.02
CPNE8-207ENST00000550863 PDE6BP35913 854 aa15.17■□□□□ 0.02
CPNE8-207ENST00000550863 TTLL7Q6ZT98 887 aa15.17■□□□□ 0.02
CPNE8-207ENST00000550863 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
CPNE8-207ENST00000550863 NBPF5PQ86XG9 351 aaPredicted RBP15.17■□□□□ 0.02
CPNE8-207ENST00000550863 RRAGCQ9HB90 399 aa15.17■□□□□ 0.02
CPNE8-207ENST00000550863 NIP7Q9Y221 180 aaKnown RBP eCLIP15.17■□□□□ 0.02
CPNE8-207ENST00000550863 MYBBP1AQ9BQG0 1328 aaKnown RBP15.17■□□□□ 0.02
CPNE8-207ENST00000550863 ANXA1P04083 346 aa15.16■□□□□ 0.02
CPNE8-207ENST00000550863 NEFMP07197 916 aa15.16■□□□□ 0.02
CPNE8-207ENST00000550863 SRGNP10124 158 aa15.16■□□□□ 0.02
CPNE8-207ENST00000550863 ST5P78524 1137 aa15.16■□□□□ 0.02
CPNE8-207ENST00000550863 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
CPNE8-207ENST00000550863 UBN2Q6ZU65 1347 aa15.16■□□□□ 0.02
CPNE8-207ENST00000550863 LMNB1P20700 586 aa15.15■□□□□ 0.02
CPNE8-207ENST00000550863 RALBP1Q15311 655 aa15.15■□□□□ 0.02
CPNE8-207ENST00000550863 KRT24Q2M2I5 525 aa15.15■□□□□ 0.02
CPNE8-207ENST00000550863 PROSER3Q2NL68 480 aa15.15■□□□□ 0.02
CPNE8-207ENST00000550863 NUTM1Q86Y26 1132 aa15.15■□□□□ 0.02
CPNE8-207ENST00000550863 ZBTB3Q9H5J0 574 aa15.15■□□□□ 0.02
CPNE8-207ENST00000550863 COL4A5P29400 1685 aa15.15■□□□□ 0.02
CPNE8-207ENST00000550863 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
CPNE8-207ENST00000550863 TOMM70O94826 608 aa15.14■□□□□ 0.01
CPNE8-207ENST00000550863 GPTP24298 496 aa15.14■□□□□ 0.01
CPNE8-207ENST00000550863 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
CPNE8-207ENST00000550863 RIPK4P57078 832 aa15.14■□□□□ 0.01
CPNE8-207ENST00000550863 NEUROD2Q15784 382 aa15.14■□□□□ 0.01
CPNE8-207ENST00000550863 NECTIN2Q92692 538 aa15.14■□□□□ 0.01
CPNE8-207ENST00000550863 TSPYL4Q9UJ04 414 aa15.14■□□□□ 0.01
CPNE8-207ENST00000550863 ZNF652Q9Y2D9 606 aa15.13■□□□□ 0.01
CPNE8-207ENST00000550863 MAP3K15Q6ZN16 1313 aa15.13■□□□□ 0.01
CPNE8-207ENST00000550863 KDM2BQ8NHM5 1336 aa15.13■□□□□ 0.01
CPNE8-207ENST00000550863 COL4A1P02462 1669 aa15.12■□□□□ 0.01
CPNE8-207ENST00000550863 SNED1Q8TER0 1413 aa15.12■□□□□ 0.01
CPNE8-207ENST00000550863 STYK1Q6J9G0 422 aa15.12■□□□□ 0.01
CPNE8-207ENST00000550863 CLEC4GQ6UXB4 293 aa15.12■□□□□ 0.01
CPNE8-207ENST00000550863 PNISRQ8TF01 805 aaKnown RBP15.12■□□□□ 0.01
CPNE8-207ENST00000550863 ZNF428Q96B54 188 aa15.12■□□□□ 0.01
CPNE8-207ENST00000550863 EIF2S2P20042 333 aaKnown RBP15.11■□□□□ 0.01
CPNE8-207ENST00000550863 LRP10Q7Z4F1 713 aa15.11■□□□□ 0.01
CPNE8-207ENST00000550863 MASTLQ96GX5 879 aa15.11■□□□□ 0.01
CPNE8-207ENST00000550863 GLTPD2A6NH11 291 aa15.1■□□□□ 0.01
CPNE8-207ENST00000550863 POTECB2RU33 542 aa15.1■□□□□ 0.01
CPNE8-207ENST00000550863 PDIA6Q15084 440 aa15.1■□□□□ 0.01
CPNE8-207ENST00000550863 ERFEQ4G0M1 354 aa15.1■□□□□ 0.01
CPNE8-207ENST00000550863 C3orf67Q6ZVT6 689 aa15.1■□□□□ 0.01
CPNE8-207ENST00000550863 C16orf71Q8IYS4 520 aaPredicted RBP15.1■□□□□ 0.01
CPNE8-207ENST00000550863 RBM46Q8TBY0 533 aaKnown RBP15.1■□□□□ 0.01
CPNE8-207ENST00000550863 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
CPNE8-207ENST00000550863 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
CPNE8-207ENST00000550863 SCN4AP35499 1836 aa15.09■□□□□ 0.01
CPNE8-207ENST00000550863 KIF6Q6ZMV9 814 aa15.09■□□□□ 0.01
CPNE8-207ENST00000550863 C7orf43Q8WVR3 580 aa15.09■□□□□ 0.01
CPNE8-207ENST00000550863 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
CPNE8-207ENST00000550863 TRIM35Q9UPQ4 493 aa15.09■□□□□ 0.01
CPNE8-207ENST00000550863 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
CPNE8-207ENST00000550863 PCNTO95613 3336 aa15.09■□□□□ 0.01
CPNE8-207ENST00000550863 POTEIP0CG38 1075 aa15.08■□□□□ 0
CPNE8-207ENST00000550863 POTEJP0CG39 1038 aa15.08■□□□□ 0
CPNE8-207ENST00000550863 NPR1P16066 1061 aa15.08■□□□□ 0
CPNE8-207ENST00000550863 SUSD4Q5VX71 490 aa15.08■□□□□ 0
CPNE8-207ENST00000550863 ADAMTS8Q9UP79 889 aa15.08■□□□□ 0
CPNE8-207ENST00000550863 LAS1LQ9Y4W2 734 aaKnown RBP15.08■□□□□ 0
CPNE8-207ENST00000550863 LTBP3Q9NS15 1303 aa15.08■□□□□ 0
CPNE8-207ENST00000550863 ADAMTSL1Q8N6G6 1762 aa15.08■□□□□ 0
CPNE8-207ENST00000550863 KLRG2A4D1S0 409 aaPredicted RBP15.07■□□□□ 0
CPNE8-207ENST00000550863 NTSR2O95665 410 aa15.07■□□□□ 0
CPNE8-207ENST00000550863 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
CPNE8-207ENST00000550863 PNNQ9H307 717 aaKnown RBP15.07■□□□□ 0
CPNE8-207ENST00000550863 PRKRIP1Q9H875 184 aaPredicted RBP15.07■□□□□ 0
CPNE8-207ENST00000550863 ZNF277Q9NRM2 450 aaPredicted RBP15.07■□□□□ 0
CPNE8-207ENST00000550863 ZNF541Q9H0D2 1346 aa15.07■□□□□ 0
CPNE8-207ENST00000550863 RIC1Q4ADV7 1423 aa15.07■□□□□ 0
CPNE8-207ENST00000550863 DDNO94850 711 aaPredicted RBP15.06■□□□□ 0
CPNE8-207ENST00000550863 WDR43Q15061 677 aaKnown RBP eCLIP15.06■□□□□ 0
CPNE8-207ENST00000550863 PDZRN3Q9UPQ7 1066 aa15.06■□□□□ 0
CPNE8-207ENST00000550863 IBTKQ9P2D0 1353 aaPredicted RBP15.06■□□□□ 0
CPNE8-207ENST00000550863 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
CPNE8-207ENST00000550863 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
CPNE8-207ENST00000550863 TCERG1O14776 1098 aaKnown RBP15.05■□□□□ -0
CPNE8-207ENST00000550863 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ -0
CPNE8-207ENST00000550863 APLP1P51693 650 aa15.05■□□□□ -0
CPNE8-207ENST00000550863 AIMP1Q12904 312 aaKnown RBP15.05■□□□□ -0
CPNE8-207ENST00000550863 CRY2Q49AN0 593 aa15.05■□□□□ -0
CPNE8-207ENST00000550863 CCDC93Q567U6 631 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms