RNA–Protein interactions for RNA: ENST00000550751.1

CHCHD3P2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 2, humanhuman

BASIC

Gene CHCHD3P2, Length 639 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P2-201ENST00000550751 BCORQ6W2J9 1755 aa10.1□□□□□ -0.79
CHCHD3P2-201ENST00000550751 AFDNP55196 1824 aaKnown RBP10.1□□□□□ -0.79
CHCHD3P2-201ENST00000550751 CHL1O00533 1208 aa10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 ZBTB7AO95365 584 aa10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 SEC24BO95487 1268 aa10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 CALD1Q05682 793 aaKnown RBP10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 TRAPPC3LQ5T215 181 aa10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 IFNLR1Q8IU57 520 aaPredicted RBP10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 SCN7AQ01118 1682 aa10.09□□□□□ -0.79
CHCHD3P2-201ENST00000550751 PHF14O94880 888 aa10.08□□□□□ -0.8
CHCHD3P2-201ENST00000550751 PTGER2P43116 358 aa10.08□□□□□ -0.8
CHCHD3P2-201ENST00000550751 EIF4A1P60842 406 aaKnown RBP10.08□□□□□ -0.8
CHCHD3P2-201ENST00000550751 NGEFQ8N5V2 710 aa10.08□□□□□ -0.8
CHCHD3P2-201ENST00000550751 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
CHCHD3P2-201ENST00000550751 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
CHCHD3P2-201ENST00000550751 TSPYL4Q9UJ04 414 aa10.08□□□□□ -0.8
CHCHD3P2-201ENST00000550751 SOS1Q07889 1333 aaPredicted RBP10.07□□□□□ -0.8
CHCHD3P2-201ENST00000550751 GIGYF1O75420 1035 aaPredicted RBP10.07□□□□□ -0.8
CHCHD3P2-201ENST00000550751 ZNF853P0CG23 659 aa10.07□□□□□ -0.8
CHCHD3P2-201ENST00000550751 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
CHCHD3P2-201ENST00000550751 FAM9BQ8IZU0 186 aa10.07□□□□□ -0.8
CHCHD3P2-201ENST00000550751 USP16Q9Y5T5 823 aa10.07□□□□□ -0.8
CHCHD3P2-201ENST00000550751 RFC4P35249 363 aa10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 IL6STP40189 918 aaPredicted RBP10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 GNAI1P63096 354 aa10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 SMIM5Q71RC9 77 aa10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 WWC1Q8IX03 1113 aa10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 PCDHB8Q9UN66 801 aa10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 ZBTB1Q9Y2K1 713 aa10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 NRXN2Q9P2S2 1712 aa10.06□□□□□ -0.8
CHCHD3P2-201ENST00000550751 COL15A1P39059 1388 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 A0A087WZG4 1122 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 POTEFA5A3E0 1075 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 A1BGP04217 495 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 CANXP27824 592 aaKnown RBP10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 POLD1P28340 1107 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 IER5LQ5T953 404 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 ANKRD36CQ5JPF3 1778 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 IL16Q14005 1332 aa10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 USP42Q9H9J4 1324 aaKnown RBP10.05□□□□□ -0.8
CHCHD3P2-201ENST00000550751 BRCA1P38398 1863 aaKnown RBP10.04□□□□□ -0.8
CHCHD3P2-201ENST00000550751 GYS1P13807 737 aa10.04□□□□□ -0.8
CHCHD3P2-201ENST00000550751 WDR63Q8IWG1 891 aa10.04□□□□□ -0.8
CHCHD3P2-201ENST00000550751 ARXQ96QS3 562 aa10.04□□□□□ -0.8
CHCHD3P2-201ENST00000550751 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
CHCHD3P2-201ENST00000550751 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
CHCHD3P2-201ENST00000550751 NARFQ9UHQ1 456 aa10.04□□□□□ -0.8
CHCHD3P2-201ENST00000550751 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
CHCHD3P2-201ENST00000550751 CHD4Q14839 1912 aa10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 RGL2O15211 777 aa10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 ZPR1O75312 459 aa10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 HOXB7P09629 217 aa10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 ZNF467Q7Z7K2 595 aaPredicted RBP10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 KIAA1551Q9HCM1 1747 aa10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 MBIPQ9NS73 344 aa10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 LAS1LQ9Y4W2 734 aaKnown RBP10.03□□□□□ -0.8
CHCHD3P2-201ENST00000550751 N4BP2Q86UW6 1770 aaPredicted RBP10.02□□□□□ -0.81
CHCHD3P2-201ENST00000550751 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
CHCHD3P2-201ENST00000550751 MSL1Q68DK7 614 aa10.02□□□□□ -0.81
CHCHD3P2-201ENST00000550751 NBPF10Q6P3W6 841 aaKnown RBP10.02□□□□□ -0.81
CHCHD3P2-201ENST00000550751 NPM2Q86SE8 214 aaKnown RBP10.02□□□□□ -0.81
CHCHD3P2-201ENST00000550751 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
CHCHD3P2-201ENST00000550751 DLEC1Q9Y238 1755 aa10.01□□□□□ -0.81
CHCHD3P2-201ENST00000550751 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
CHCHD3P2-201ENST00000550751 USPL1Q5W0Q7 1092 aa10.01□□□□□ -0.81
CHCHD3P2-201ENST00000550751 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
CHCHD3P2-201ENST00000550751 SRP68Q9UHB9 627 aaKnown RBP10.01□□□□□ -0.81
CHCHD3P2-201ENST00000550751 ANKRD31Q8N7Z5 1873 aa10.01□□□□□ -0.81
CHCHD3P2-201ENST00000550751 TM4SF1P30408 202 aa10□□□□□ -0.81
CHCHD3P2-201ENST00000550751 SYT17Q9BSW7 474 aa10□□□□□ -0.81
CHCHD3P2-201ENST00000550751 CHMP4AQ9BY43 222 aa10□□□□□ -0.81
CHCHD3P2-201ENST00000550751 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
CHCHD3P2-201ENST00000550751 ARFGEF2Q9Y6D5 1785 aa10□□□□□ -0.81
CHCHD3P2-201ENST00000550751 ZNF521Q96K83 1311 aa10□□□□□ -0.81
CHCHD3P2-201ENST00000550751 ARFGEF1Q9Y6D6 1849 aa10□□□□□ -0.81
CHCHD3P2-201ENST00000550751 CAMTA2O94983 1202 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 MMP10P09238 476 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 PIP4K2AP48426 406 aaPredicted RBP9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 PDIA6Q15084 440 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 KRT24Q2M2I5 525 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 CLEC4GQ6UXB4 293 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 LRP10Q7Z4F1 713 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 DZIP3Q86Y13 1208 aaKnown RBP9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 DDX21Q9NR30 783 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 TBC1D2BQ9UPU7 963 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 ZNF330Q9Y3S2 320 aaPredicted RBP9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 CD2APQ9Y5K6 639 aa9.99□□□□□ -0.81
CHCHD3P2-201ENST00000550751 SENP3-EIF4A1A0A087X0R7 540 aa9.98□□□□□ -0.81
CHCHD3P2-201ENST00000550751 ERVV-1B6SEH8 477 aa9.98□□□□□ -0.81
CHCHD3P2-201ENST00000550751 EIF2S2P20042 333 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms