RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 NGLY1Q96IV0 654 aa10.73□□□□□ -0.69
NPAS3-208ENST00000550662 LRFN2Q9ULH4 789 aa10.73□□□□□ -0.69
NPAS3-208ENST00000550662 HCN4Q9Y3Q4 1203 aa10.73□□□□□ -0.69
NPAS3-208ENST00000550662 INSM1Q01101 510 aaPredicted RBP10.72□□□□□ -0.69
NPAS3-208ENST00000550662 LINC00528Q8N1L1 170 aa10.72□□□□□ -0.69
NPAS3-208ENST00000550662 PHACTR1Q9C0D0 580 aa10.72□□□□□ -0.69
NPAS3-208ENST00000550662 AAMPQ13685 434 aa10.71□□□□□ -0.69
NPAS3-208ENST00000550662 SH3PXD2AQ5TCZ1 1133 aa10.71□□□□□ -0.69
NPAS3-208ENST00000550662 INSM2Q96T92 566 aaPredicted RBP10.71□□□□□ -0.69
NPAS3-208ENST00000550662 SPATA31C2B4DYI2 1134 aa10.7□□□□□ -0.7
NPAS3-208ENST00000550662 HIF1AQ16665 826 aa10.7□□□□□ -0.7
NPAS3-208ENST00000550662 NBPF1Q3BBV0 1214 aa10.7□□□□□ -0.7
NPAS3-208ENST00000550662 ZNF326Q5BKZ1 582 aaKnown RBP10.7□□□□□ -0.7
NPAS3-208ENST00000550662 MRPL14Q6P1L8 145 aaKnown RBP10.7□□□□□ -0.7
NPAS3-208ENST00000550662 POLMQ9NP87 494 aaPredicted RBP10.7□□□□□ -0.7
NPAS3-208ENST00000550662 STK17AQ9UEE5 414 aa10.7□□□□□ -0.7
NPAS3-208ENST00000550662 PARP3Q9Y6F1 533 aa10.7□□□□□ -0.7
NPAS3-208ENST00000550662 ZNF16P17020 682 aaPredicted RBP10.69□□□□□ -0.7
NPAS3-208ENST00000550662 DGKZQ13574 1117 aa10.69□□□□□ -0.7
NPAS3-208ENST00000550662 NPAS3Q8IXF0 933 aa10.69□□□□□ -0.7
NPAS3-208ENST00000550662 SLC16A10Q8TF71 515 aa10.69□□□□□ -0.7
NPAS3-208ENST00000550662 ZDHHC3Q9NYG2 299 aa10.69□□□□□ -0.7
NPAS3-208ENST00000550662 GPC6Q9Y625 555 aaPredicted RBP10.69□□□□□ -0.7
NPAS3-208ENST00000550662 FZD6O60353 706 aa10.68□□□□□ -0.7
NPAS3-208ENST00000550662 PDE3BQ13370 1112 aa10.68□□□□□ -0.7
NPAS3-208ENST00000550662 C4orf17Q53FE4 359 aa10.68□□□□□ -0.7
NPAS3-208ENST00000550662 WDR44Q5JSH3 913 aa10.68□□□□□ -0.7
NPAS3-208ENST00000550662 GIPC2Q8TF65 315 aa10.68□□□□□ -0.7
NPAS3-208ENST00000550662 PLA2G4AP47712 749 aa10.67□□□□□ -0.7
NPAS3-208ENST00000550662 IFT43Q96FT9 208 aa10.67□□□□□ -0.7
NPAS3-208ENST00000550662 DMRTB1Q96MA1 342 aa10.67□□□□□ -0.7
NPAS3-208ENST00000550662 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
NPAS3-208ENST00000550662 BMP2P12643 396 aa10.66□□□□□ -0.7
NPAS3-208ENST00000550662 USP5P45974 858 aa10.66□□□□□ -0.7
NPAS3-208ENST00000550662 VEGFBP49765 207 aa10.66□□□□□ -0.7
NPAS3-208ENST00000550662 TMC7Q7Z402 723 aa10.66□□□□□ -0.7
NPAS3-208ENST00000550662 H3BM21 787 aa10.65□□□□□ -0.7
NPAS3-208ENST00000550662 TATP17735 454 aaPredicted RBP10.65□□□□□ -0.7
NPAS3-208ENST00000550662 TXLNAP40222 546 aa10.65□□□□□ -0.7
NPAS3-208ENST00000550662 CTSOP43234 321 aaPredicted RBP10.65□□□□□ -0.7
NPAS3-208ENST00000550662 FBXO33Q7Z6M2 555 aa10.65□□□□□ -0.7
NPAS3-208ENST00000550662 RHPN1Q8TCX5 695 aa10.65□□□□□ -0.7
NPAS3-208ENST00000550662 TMC1Q8TDI8 760 aa10.65□□□□□ -0.7
NPAS3-208ENST00000550662 CCDC87Q9NVE4 849 aa10.65□□□□□ -0.7
NPAS3-208ENST00000550662 FAM13BQ9NYF5 915 aa10.65□□□□□ -0.7
NPAS3-208ENST00000550662 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
NPAS3-208ENST00000550662 UNCXA6NJT0 531 aa10.64□□□□□ -0.71
NPAS3-208ENST00000550662 TREHO43280 583 aa10.64□□□□□ -0.71
NPAS3-208ENST00000550662 MZF1P28698 734 aaPredicted RBP10.64□□□□□ -0.71
NPAS3-208ENST00000550662 GMPRP36959 345 aa10.64□□□□□ -0.71
NPAS3-208ENST00000550662 FGD1P98174 961 aa10.64□□□□□ -0.71
NPAS3-208ENST00000550662 SCARF1Q14162 830 aa10.64□□□□□ -0.71
NPAS3-208ENST00000550662 EAPPQ56P03 285 aaPredicted RBP10.64□□□□□ -0.71
NPAS3-208ENST00000550662 ETFBKMTQ8IXQ9 262 aa10.64□□□□□ -0.71
NPAS3-208ENST00000550662 AIDAQ96BJ3 306 aa10.64□□□□□ -0.71
NPAS3-208ENST00000550662 ZBTB39O15060 712 aa10.63□□□□□ -0.71
NPAS3-208ENST00000550662 PCSK2P16519 638 aa10.63□□□□□ -0.71
NPAS3-208ENST00000550662 ZAP70P43403 619 aa10.63□□□□□ -0.71
NPAS3-208ENST00000550662 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
NPAS3-208ENST00000550662 LYSMD3Q7Z3D4 306 aa10.63□□□□□ -0.71
NPAS3-208ENST00000550662 RNF217Q8TC41 542 aa10.63□□□□□ -0.71
NPAS3-208ENST00000550662 IRF7Q92985 503 aa10.63□□□□□ -0.71
NPAS3-208ENST00000550662 FAM129BQ96TA1 746 aa10.63□□□□□ -0.71
NPAS3-208ENST00000550662 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
NPAS3-208ENST00000550662 RPLP1P05386 114 aaKnown RBP10.62□□□□□ -0.71
NPAS3-208ENST00000550662 LORP23490 312 aaPredicted RBP10.62□□□□□ -0.71
NPAS3-208ENST00000550662 C6orf118Q5T5N4 469 aa10.62□□□□□ -0.71
NPAS3-208ENST00000550662 IER5Q5VY09 327 aa10.62□□□□□ -0.71
NPAS3-208ENST00000550662 ANKIB1Q9P2G1 1089 aa10.62□□□□□ -0.71
NPAS3-208ENST00000550662 ERBB4Q15303 1308 aa10.61□□□□□ -0.71
NPAS3-208ENST00000550662 TGFBR3LH3BV60 316 aa10.61□□□□□ -0.71
NPAS3-208ENST00000550662 PLCB3Q01970 1234 aa10.61□□□□□ -0.71
NPAS3-208ENST00000550662 FMR1Q06787 632 aaKnown RBP eCLIP10.61□□□□□ -0.71
NPAS3-208ENST00000550662 POU4F2Q12837 409 aa10.61□□□□□ -0.71
NPAS3-208ENST00000550662 FAM26DQ5JW98 314 aa10.61□□□□□ -0.71
NPAS3-208ENST00000550662 TREML1Q86YW5 311 aa10.61□□□□□ -0.71
NPAS3-208ENST00000550662 C7orf43Q8WVR3 580 aa10.61□□□□□ -0.71
NPAS3-208ENST00000550662 ALKBH8Q96BT7 664 aaKnown RBP10.61□□□□□ -0.71
NPAS3-208ENST00000550662 MRRFQ96E11 262 aaKnown RBP10.61□□□□□ -0.71
NPAS3-208ENST00000550662 PHKA2P46019 1235 aa10.6□□□□□ -0.71
NPAS3-208ENST00000550662 PRICKLE2Q7Z3G6 844 aa10.6□□□□□ -0.71
NPAS3-208ENST00000550662 ATCAYQ86WG3 371 aa10.6□□□□□ -0.71
NPAS3-208ENST00000550662 GJD3Q8N144 294 aa10.6□□□□□ -0.71
NPAS3-208ENST00000550662 EDEM1Q92611 657 aa10.6□□□□□ -0.71
NPAS3-208ENST00000550662 POLIQ9UNA4 740 aa10.6□□□□□ -0.71
NPAS3-208ENST00000550662 A0A1B0GTH6 734 aa10.59□□□□□ -0.71
NPAS3-208ENST00000550662 TTLL8A6PVC2 850 aa10.59□□□□□ -0.71
NPAS3-208ENST00000550662 PDGFAP04085 211 aa10.59□□□□□ -0.71
NPAS3-208ENST00000550662 DNM1Q05193 864 aaKnown RBP10.59□□□□□ -0.71
NPAS3-208ENST00000550662 EHHADHQ08426 723 aa10.59□□□□□ -0.71
NPAS3-208ENST00000550662 DSC3Q14574 896 aa10.59□□□□□ -0.71
NPAS3-208ENST00000550662 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
NPAS3-208ENST00000550662 MICAL2O94851 1124 aa10.58□□□□□ -0.72
NPAS3-208ENST00000550662 IGHA2P01877 340 aa10.58□□□□□ -0.72
NPAS3-208ENST00000550662 P4HBP07237 508 aaKnown RBP10.58□□□□□ -0.72
NPAS3-208ENST00000550662 VAMP1P23763 118 aa10.58□□□□□ -0.72
NPAS3-208ENST00000550662 TTC16Q8NEE8 873 aa10.58□□□□□ -0.72
NPAS3-208ENST00000550662 SUSD3Q96L08 255 aa10.58□□□□□ -0.72
NPAS3-208ENST00000550662 NEUROD4Q9HD90 331 aa10.58□□□□□ -0.72
NPAS3-208ENST00000550662 TIMMDC1Q9NPL8 285 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms