RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 NFKBIEO00221 500 aa17.74■□□□□ 0.43
GCN1-206ENST00000549815 HLFQ16534 295 aa17.74■□□□□ 0.43
GCN1-206ENST00000549815 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
GCN1-206ENST00000549815 SLX4Q8IY92 1834 aa17.73■□□□□ 0.43
GCN1-206ENST00000549815 SRGNP10124 158 aa17.73■□□□□ 0.43
GCN1-206ENST00000549815 HSPA6P17066 643 aa17.73■□□□□ 0.43
GCN1-206ENST00000549815 RIPK4P57078 832 aa17.73■□□□□ 0.43
GCN1-206ENST00000549815 ST5P78524 1137 aa17.73■□□□□ 0.43
GCN1-206ENST00000549815 ZNF622Q969S3 477 aaKnown RBP eCLIP17.73■□□□□ 0.43
GCN1-206ENST00000549815 CACNA1SQ13698 1873 aa17.72■□□□□ 0.43
GCN1-206ENST00000549815 LMNB1P20700 586 aa17.72■□□□□ 0.43
GCN1-206ENST00000549815 TMPOP42166 694 aaKnown RBP17.72■□□□□ 0.43
GCN1-206ENST00000549815 NUP98P52948 1817 aa17.72■□□□□ 0.43
GCN1-206ENST00000549815 TIAM2Q8IVF5 1701 aa17.72■□□□□ 0.43
GCN1-206ENST00000549815 ZC3H4Q9UPT8 1303 aaKnown RBP17.72■□□□□ 0.43
GCN1-206ENST00000549815 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.43
GCN1-206ENST00000549815 KLRG2A4D1S0 409 aaPredicted RBP17.71■□□□□ 0.43
GCN1-206ENST00000549815 TOMM70O94826 608 aa17.71■□□□□ 0.43
GCN1-206ENST00000549815 STYK1Q6J9G0 422 aa17.71■□□□□ 0.43
GCN1-206ENST00000549815 NBPF5PQ86XG9 351 aaPredicted RBP17.71■□□□□ 0.43
GCN1-206ENST00000549815 NIP7Q9Y221 180 aaKnown RBP eCLIP17.71■□□□□ 0.43
GCN1-206ENST00000549815 C21orf2O43822 256 aa17.7■□□□□ 0.42
GCN1-206ENST00000549815 MASTLQ96GX5 879 aa17.7■□□□□ 0.42
GCN1-206ENST00000549815 BABAM1Q9NWV8 329 aa17.7■□□□□ 0.42
GCN1-206ENST00000549815 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
GCN1-206ENST00000549815 DICER1Q9UPY3 1922 aaKnown RBP17.69■□□□□ 0.42
GCN1-206ENST00000549815 ERVV-1B6SEH8 477 aa17.69■□□□□ 0.42
GCN1-206ENST00000549815 TPTE2Q6XPS3 522 aa17.69■□□□□ 0.42
GCN1-206ENST00000549815 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
GCN1-206ENST00000549815 LRP10Q7Z4F1 713 aa17.69■□□□□ 0.42
GCN1-206ENST00000549815 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
GCN1-206ENST00000549815 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
GCN1-206ENST00000549815 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
GCN1-206ENST00000549815 NPHP1O15259 732 aa17.68■□□□□ 0.42
GCN1-206ENST00000549815 NGEFQ8N5V2 710 aa17.68■□□□□ 0.42
GCN1-206ENST00000549815 RRP7AQ9Y3A4 280 aaKnown RBP17.68■□□□□ 0.42
GCN1-206ENST00000549815 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
GCN1-206ENST00000549815 LTBP3Q9NS15 1303 aa17.68■□□□□ 0.42
GCN1-206ENST00000549815 MYL6BP14649 208 aa17.67■□□□□ 0.42
GCN1-206ENST00000549815 LMOD3Q0VAK6 560 aa17.67■□□□□ 0.42
GCN1-206ENST00000549815 PDIA6Q15084 440 aa17.67■□□□□ 0.42
GCN1-206ENST00000549815 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
GCN1-206ENST00000549815 CCDC146Q8IYE0 955 aa17.67■□□□□ 0.42
GCN1-206ENST00000549815 C7orf43Q8WVR3 580 aa17.67■□□□□ 0.42
GCN1-206ENST00000549815 PRKRIP1Q9H875 184 aaPredicted RBP17.67■□□□□ 0.42
GCN1-206ENST00000549815 RRAGCQ9HB90 399 aa17.67■□□□□ 0.42
GCN1-206ENST00000549815 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
GCN1-206ENST00000549815 GLTPD2A6NH11 291 aa17.66■□□□□ 0.42
GCN1-206ENST00000549815 RBM46Q8TBY0 533 aaKnown RBP17.66■□□□□ 0.42
GCN1-206ENST00000549815 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
GCN1-206ENST00000549815 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
GCN1-206ENST00000549815 TRIM35Q9UPQ4 493 aa17.66■□□□□ 0.42
GCN1-206ENST00000549815 FAM177BA6PVY3 158 aa17.65■□□□□ 0.42
GCN1-206ENST00000549815 NPR1P16066 1061 aa17.65■□□□□ 0.42
GCN1-206ENST00000549815 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
GCN1-206ENST00000549815 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
GCN1-206ENST00000549815 CHL1O00533 1208 aa17.64■□□□□ 0.41
GCN1-206ENST00000549815 KIF6Q6ZMV9 814 aa17.64■□□□□ 0.41
GCN1-206ENST00000549815 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
GCN1-206ENST00000549815 IBTKQ9P2D0 1353 aaPredicted RBP17.64■□□□□ 0.41
GCN1-206ENST00000549815 WDR43Q15061 677 aaKnown RBP eCLIP17.63■□□□□ 0.41
GCN1-206ENST00000549815 NEUROD2Q15784 382 aa17.63■□□□□ 0.41
GCN1-206ENST00000549815 PROSER3Q2NL68 480 aa17.63■□□□□ 0.41
GCN1-206ENST00000549815 SOGA3Q5TF21 947 aa17.63■□□□□ 0.41
GCN1-206ENST00000549815 ZNF34Q8IZ26 560 aa17.63■□□□□ 0.41
GCN1-206ENST00000549815 ZBTB3Q9H5J0 574 aa17.63■□□□□ 0.41
GCN1-206ENST00000549815 WDR90Q96KV7 1748 aa17.63■□□□□ 0.41
GCN1-206ENST00000549815 RIC1Q4ADV7 1423 aa17.63■□□□□ 0.41
GCN1-206ENST00000549815 EIF2S2P20042 333 aaKnown RBP17.62■□□□□ 0.41
GCN1-206ENST00000549815 CRY2Q49AN0 593 aa17.62■□□□□ 0.41
GCN1-206ENST00000549815 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
GCN1-206ENST00000549815 GIGYF2Q6Y7W6 1299 aaKnown RBP17.62■□□□□ 0.41
GCN1-206ENST00000549815 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
GCN1-206ENST00000549815 NYXQ9GZU5 481 aa17.62■□□□□ 0.41
GCN1-206ENST00000549815 POTECB2RU33 542 aa17.61■□□□□ 0.41
GCN1-206ENST00000549815 APLP1P51693 650 aa17.61■□□□□ 0.41
GCN1-206ENST00000549815 FSTL1Q12841 308 aa17.61■□□□□ 0.41
GCN1-206ENST00000549815 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
GCN1-206ENST00000549815 C16orf71Q8IYS4 520 aaPredicted RBP17.61■□□□□ 0.41
GCN1-206ENST00000549815 SNED1Q8TER0 1413 aa17.61■□□□□ 0.41
GCN1-206ENST00000549815 NTSR2O95665 410 aa17.6■□□□□ 0.41
GCN1-206ENST00000549815 ANXA1P04083 346 aa17.6■□□□□ 0.41
GCN1-206ENST00000549815 GPTP24298 496 aa17.6■□□□□ 0.41
GCN1-206ENST00000549815 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
GCN1-206ENST00000549815 CCDC93Q567U6 631 aa17.6■□□□□ 0.41
GCN1-206ENST00000549815 ANKRD36CQ5JPF3 1778 aa17.59■□□□□ 0.41
GCN1-206ENST00000549815 VEGFAP15692 232 aaPredicted RBP17.59■□□□□ 0.41
GCN1-206ENST00000549815 GTF2E1P29083 439 aaPredicted RBP17.59■□□□□ 0.41
GCN1-206ENST00000549815 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
GCN1-206ENST00000549815 OLFM4Q6UX06 510 aa17.59■□□□□ 0.41
GCN1-206ENST00000549815 FKBP4Q02790 459 aaKnown RBP eCLIP17.58■□□□□ 0.4
GCN1-206ENST00000549815 DNAJC5GQ8N7S2 189 aa17.58■□□□□ 0.4
GCN1-206ENST00000549815 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
GCN1-206ENST00000549815 PARP10Q53GL7 1025 aa17.57■□□□□ 0.4
GCN1-206ENST00000549815 DPY19L2Q6NUT2 758 aa17.57■□□□□ 0.4
GCN1-206ENST00000549815 COPS6Q7L5N1 327 aa17.57■□□□□ 0.4
GCN1-206ENST00000549815 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
GCN1-206ENST00000549815 SMC1BQ8NDV3 1235 aa17.56■□□□□ 0.4
GCN1-206ENST00000549815 CFAP44Q96MT7 982 aa17.56■□□□□ 0.4
GCN1-206ENST00000549815 DDX21Q9NR30 783 aaKnown RBP eCLIP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms