RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 C9orf131Q5VYM1 1079 aa31.65■■■□□ 2.66
USP44-205ENST00000549639 NBPF5PQ86XG9 351 aaPredicted RBP31.65■■■□□ 2.66
USP44-205ENST00000549639 ANKRD31Q8N7Z5 1873 aa31.65■■■□□ 2.66
USP44-205ENST00000549639 ERVV-1B6SEH8 477 aa31.64■■■□□ 2.66
USP44-205ENST00000549639 TPTE2Q6XPS3 522 aa31.64■■■□□ 2.66
USP44-205ENST00000549639 NIP7Q9Y221 180 aaKnown RBP eCLIP31.64■■■□□ 2.66
USP44-205ENST00000549639 RRP7AQ9Y3A4 280 aaKnown RBP31.63■■■□□ 2.65
USP44-205ENST00000549639 NEUROD2Q15784 382 aa31.62■■■□□ 2.65
USP44-205ENST00000549639 ZNF622Q969S3 477 aaKnown RBP eCLIP31.62■■■□□ 2.65
USP44-205ENST00000549639 KIF6Q6ZMV9 814 aa31.61■■■□□ 2.65
USP44-205ENST00000549639 CCDC24Q8N4L8 307 aa31.6■■■□□ 2.65
USP44-205ENST00000549639 RNF181Q9P0P0 153 aa31.6■■■□□ 2.65
USP44-205ENST00000549639 MAP3K15Q6ZN16 1313 aa31.59■■■□□ 2.65
USP44-205ENST00000549639 HLFQ16534 295 aa31.59■■■□□ 2.65
USP44-205ENST00000549639 STYK1Q6J9G0 422 aa31.59■■■□□ 2.65
USP44-205ENST00000549639 CNKSR1Q969H4 720 aa31.59■■■□□ 2.65
USP44-205ENST00000549639 TRIM35Q9UPQ4 493 aa31.59■■■□□ 2.65
USP44-205ENST00000549639 ZC3H4Q9UPT8 1303 aaKnown RBP31.58■■■□□ 2.65
USP44-205ENST00000549639 SRGNP10124 158 aa31.58■■■□□ 2.65
USP44-205ENST00000549639 MYL6BP14649 208 aa31.58■■■□□ 2.65
USP44-205ENST00000549639 NGEFQ8N5V2 710 aa31.58■■■□□ 2.65
USP44-205ENST00000549639 MASTLQ96GX5 879 aa31.58■■■□□ 2.65
USP44-205ENST00000549639 CHL1O00533 1208 aa31.57■■■□□ 2.64
USP44-205ENST00000549639 LMNB1P20700 586 aa31.56■■■□□ 2.64
USP44-205ENST00000549639 SBF1O95248 1867 aa31.56■■■□□ 2.64
USP44-205ENST00000549639 COL11A2P13942 1736 aaPredicted RBP31.55■■■□□ 2.64
USP44-205ENST00000549639 SENP3-EIF4A1A0A087X0R7 540 aa31.55■■■□□ 2.64
USP44-205ENST00000549639 KLRG2A4D1S0 409 aaPredicted RBP31.55■■■□□ 2.64
USP44-205ENST00000549639 NYXQ9GZU5 481 aa31.55■■■□□ 2.64
USP44-205ENST00000549639 KIF3CO14782 793 aa31.54■■■□□ 2.64
USP44-205ENST00000549639 TTLL7Q6ZT98 887 aa31.54■■■□□ 2.64
USP44-205ENST00000549639 EIF2S2P20042 333 aaKnown RBP31.53■■■□□ 2.64
USP44-205ENST00000549639 GTF2E1P29083 439 aaPredicted RBP31.53■■■□□ 2.64
USP44-205ENST00000549639 SOGA3Q5TF21 947 aa31.53■■■□□ 2.64
USP44-205ENST00000549639 KDM2BQ8NHM5 1336 aa31.52■■■□□ 2.64
USP44-205ENST00000549639 RASSF7Q02833 373 aa31.52■■■□□ 2.64
USP44-205ENST00000549639 NUP98P52948 1817 aa31.52■■■□□ 2.64
USP44-205ENST00000549639 NPR1P16066 1061 aa31.51■■■□□ 2.63
USP44-205ENST00000549639 PDIA6Q15084 440 aa31.51■■■□□ 2.63
USP44-205ENST00000549639 C21orf2O43822 256 aa31.5■■■□□ 2.63
USP44-205ENST00000549639 GIGYF2Q6Y7W6 1299 aaKnown RBP31.5■■■□□ 2.63
USP44-205ENST00000549639 ZBTB3Q9H5J0 574 aa31.5■■■□□ 2.63
USP44-205ENST00000549639 IBTKQ9P2D0 1353 aaPredicted RBP31.5■■■□□ 2.63
USP44-205ENST00000549639 NFKBIEO00221 500 aa31.49■■■□□ 2.63
USP44-205ENST00000549639 PRPF40BQ6NWY9 871 aaKnown RBP31.49■■■□□ 2.63
USP44-205ENST00000549639 LRP10Q7Z4F1 713 aa31.49■■■□□ 2.63
USP44-205ENST00000549639 CFAP44Q96MT7 982 aa31.49■■■□□ 2.63
USP44-205ENST00000549639 LAS1LQ9Y4W2 734 aaKnown RBP31.49■■■□□ 2.63
USP44-205ENST00000549639 FAM177BA6PVY3 158 aa31.48■■■□□ 2.63
USP44-205ENST00000549639 HOXB7P09629 217 aa31.48■■■□□ 2.63
USP44-205ENST00000549639 CALD1Q05682 793 aaKnown RBP31.48■■■□□ 2.63
USP44-205ENST00000549639 ARFGEF2Q9Y6D5 1785 aa31.48■■■□□ 2.63
USP44-205ENST00000549639 LTBP3Q9NS15 1303 aa31.47■■■□□ 2.63
USP44-205ENST00000549639 ZNF316A6NFI3 1004 aaPredicted RBP31.46■■■□□ 2.63
USP44-205ENST00000549639 TOMM70O94826 608 aa31.46■■■□□ 2.63
USP44-205ENST00000549639 ZNF34Q8IZ26 560 aa31.46■■■□□ 2.63
USP44-205ENST00000549639 APAF1O14727 1248 aa31.45■■■□□ 2.63
USP44-205ENST00000549639 PARP10Q53GL7 1025 aa31.45■■■□□ 2.63
USP44-205ENST00000549639 NMRK2Q9NPI5 230 aa31.45■■■□□ 2.63
USP44-205ENST00000549639 DDX21Q9NR30 783 aaKnown RBP eCLIP31.45■■■□□ 2.63
USP44-205ENST00000549639 ZNF219Q9P2Y4 722 aaPredicted RBP31.45■■■□□ 2.63
USP44-205ENST00000549639 RIC1Q4ADV7 1423 aa31.44■■■□□ 2.62
USP44-205ENST00000549639 ALDH1B1P30837 517 aa31.44■■■□□ 2.62
USP44-205ENST00000549639 SLX4Q8IY92 1834 aa31.44■■■□□ 2.62
USP44-205ENST00000549639 FER1L6Q2WGJ9 1857 aa31.44■■■□□ 2.62
USP44-205ENST00000549639 GPTP24298 496 aa31.43■■■□□ 2.62
USP44-205ENST00000549639 PRELPP51888 382 aa31.43■■■□□ 2.62
USP44-205ENST00000549639 PPP1R42Q7Z4L9 355 aa31.43■■■□□ 2.62
USP44-205ENST00000549639 TAOK3Q9H2K8 898 aa31.43■■■□□ 2.62
USP44-205ENST00000549639 PROSER3Q2NL68 480 aa31.42■■■□□ 2.62
USP44-205ENST00000549639 HSP90AB3PQ58FF7 597 aa31.42■■■□□ 2.62
USP44-205ENST00000549639 UBN2Q6ZU65 1347 aa31.42■■■□□ 2.62
USP44-205ENST00000549639 CRY2Q49AN0 593 aa31.41■■■□□ 2.62
USP44-205ENST00000549639 C7orf43Q8WVR3 580 aa31.41■■■□□ 2.62
USP44-205ENST00000549639 IFT57Q9NWB7 429 aa31.41■■■□□ 2.62
USP44-205ENST00000549639 ZNF853P0CG23 659 aa31.4■■■□□ 2.62
USP44-205ENST00000549639 GNAI1P63096 354 aa31.4■■■□□ 2.62
USP44-205ENST00000549639 ERFEQ4G0M1 354 aa31.4■■■□□ 2.62
USP44-205ENST00000549639 CCDC93Q567U6 631 aa31.4■■■□□ 2.62
USP44-205ENST00000549639 SUSD4Q5VX71 490 aa31.4■■■□□ 2.62
USP44-205ENST00000549639 COPS6Q7L5N1 327 aa31.4■■■□□ 2.62
USP44-205ENST00000549639 NUTM1Q86Y26 1132 aa31.4■■■□□ 2.62
USP44-205ENST00000549639 C16orf71Q8IYS4 520 aaPredicted RBP31.4■■■□□ 2.62
USP44-205ENST00000549639 GLTPD2A6NH11 291 aa31.39■■■□□ 2.62
USP44-205ENST00000549639 ANXA1P04083 346 aa31.39■■■□□ 2.62
USP44-205ENST00000549639 HSPA6P17066 643 aa31.39■■■□□ 2.62
USP44-205ENST00000549639 KRT24Q2M2I5 525 aa31.39■■■□□ 2.62
USP44-205ENST00000549639 HDGFL1Q5TGJ6 251 aa31.39■■■□□ 2.62
USP44-205ENST00000549639 NECTIN2Q92692 538 aa31.39■■■□□ 2.62
USP44-205ENST00000549639 TNRC6CQ9HCJ0 1690 aaKnown RBP31.38■■■□□ 2.61
USP44-205ENST00000549639 CACNA1SQ13698 1873 aa31.38■■■□□ 2.61
USP44-205ENST00000549639 CCDC88AQ3V6T2 1871 aa31.38■■■□□ 2.61
USP44-205ENST00000549639 NTSR2O95665 410 aa31.38■■■□□ 2.61
USP44-205ENST00000549639 XAGE3Q8WTP9 111 aa31.38■■■□□ 2.61
USP44-205ENST00000549639 MBIPQ9NS73 344 aa31.38■■■□□ 2.61
USP44-205ENST00000549639 DBF4Q9UBU7 674 aaPredicted RBP31.38■■■□□ 2.61
USP44-205ENST00000549639 RNF123Q5XPI4 1314 aa31.38■■■□□ 2.61
USP44-205ENST00000549639 ABCC12Q96J65 1359 aa31.38■■■□□ 2.61
USP44-205ENST00000549639 RBM46Q8TBY0 533 aaKnown RBP31.37■■■□□ 2.61
USP44-205ENST00000549639 TIAM2Q8IVF5 1701 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms