RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PHKA2P46019 1235 aa7.1□□□□□ -1.27
PTCH1-216ENST00000548379 IER5Q5VY09 327 aa7.1□□□□□ -1.27
PTCH1-216ENST00000548379 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
PTCH1-216ENST00000548379 CITED4Q96RK1 184 aa7.1□□□□□ -1.27
PTCH1-216ENST00000548379 KLK14Q9P0G3 267 aa7.1□□□□□ -1.27
PTCH1-216ENST00000548379 DMGDHQ9UI17 866 aaKnown RBP7.1□□□□□ -1.27
PTCH1-216ENST00000548379 RGL4Q8IZJ4 473 aa7.09□□□□□ -1.27
PTCH1-216ENST00000548379 ZIC5Q96T25 663 aa7.09□□□□□ -1.27
PTCH1-216ENST00000548379 ATP13A2Q9NQ11 1180 aa7.09□□□□□ -1.27
PTCH1-216ENST00000548379 AAASQ9NRG9 546 aa7.09□□□□□ -1.27
PTCH1-216ENST00000548379 DNMT3LQ9UJW3 386 aa7.09□□□□□ -1.27
PTCH1-216ENST00000548379 A0A1B0GTH6 734 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 RBM47A0AV96 593 aaKnown RBP7.08□□□□□ -1.28
PTCH1-216ENST00000548379 ANKRD33BA6NCL7 494 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 FIGNL2A6NMB9 653 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 TGFBR3LH3BV60 316 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 TATP17735 454 aaPredicted RBP7.08□□□□□ -1.28
PTCH1-216ENST00000548379 MSX1P28360 303 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 MAPK1P28482 360 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 COL19A1Q14993 1142 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 HIF1AQ16665 826 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 NPM2Q86SE8 214 aaKnown RBP7.08□□□□□ -1.28
PTCH1-216ENST00000548379 RHPN1Q8TCX5 695 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 TIMMDC1Q9NPL8 285 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 CCDC87Q9NVE4 849 aa7.08□□□□□ -1.28
PTCH1-216ENST00000548379 SENP3-EIF4A1A0A087X0R7 540 aa7.07□□□□□ -1.28
PTCH1-216ENST00000548379 RHOQP17081 205 aa7.07□□□□□ -1.28
PTCH1-216ENST00000548379 ZNF280CQ8ND82 737 aa7.07□□□□□ -1.28
PTCH1-216ENST00000548379 SUSD3Q96L08 255 aa7.07□□□□□ -1.28
PTCH1-216ENST00000548379 FAM129BQ96TA1 746 aa7.07□□□□□ -1.28
PTCH1-216ENST00000548379 CRISPLD1Q9H336 500 aa7.07□□□□□ -1.28
PTCH1-216ENST00000548379 DYRK1BQ9Y463 629 aa7.07□□□□□ -1.28
PTCH1-216ENST00000548379 OPLAHO14841 1288 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 ST8SIA5O15466 376 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 NDUFB5O43674 189 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 MZF1P28698 734 aaPredicted RBP7.06□□□□□ -1.28
PTCH1-216ENST00000548379 ZAP70P43403 619 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 DSC3Q14574 896 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.06□□□□□ -1.28
PTCH1-216ENST00000548379 TMC7Q7Z402 723 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 ATCAYQ86WG3 371 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 TREML1Q86YW5 311 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 ZSCAN29Q8IWY8 852 aaPredicted RBP7.06□□□□□ -1.28
PTCH1-216ENST00000548379 GJD3Q8N144 294 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 DACH1Q9UI36 760 aa7.06□□□□□ -1.28
PTCH1-216ENST00000548379 MICAL2O94851 1124 aa7.05□□□□□ -1.28
PTCH1-216ENST00000548379 PDGFAP04085 211 aa7.05□□□□□ -1.28
PTCH1-216ENST00000548379 FBXO33Q7Z6M2 555 aa7.05□□□□□ -1.28
PTCH1-216ENST00000548379 HSH2DQ96JZ2 352 aa7.05□□□□□ -1.28
PTCH1-216ENST00000548379 ANKIB1Q9P2G1 1089 aa7.05□□□□□ -1.28
PTCH1-216ENST00000548379 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
PTCH1-216ENST00000548379 TREHO43280 583 aa7.04□□□□□ -1.28
PTCH1-216ENST00000548379 F11P03951 625 aa7.04□□□□□ -1.28
PTCH1-216ENST00000548379 ZNF428Q96B54 188 aa7.04□□□□□ -1.28
PTCH1-216ENST00000548379 ALKBH8Q96BT7 664 aaKnown RBP7.04□□□□□ -1.28
PTCH1-216ENST00000548379 POLIQ9UNA4 740 aa7.04□□□□□ -1.28
PTCH1-216ENST00000548379 A0A1W2PNR3 127 aa7.03□□□□□ -1.28
PTCH1-216ENST00000548379 INPP5BP32019 993 aa7.03□□□□□ -1.28
PTCH1-216ENST00000548379 FMR1Q06787 632 aaKnown RBP eCLIP7.03□□□□□ -1.282e-7■■■■■ 26.8
PTCH1-216ENST00000548379 SAMD5Q5TGI4 173 aa7.03□□□□□ -1.28
PTCH1-216ENST00000548379 BICDL1Q6ZP65 573 aa7.03□□□□□ -1.28
PTCH1-216ENST00000548379 NLRP8Q86W28 1048 aa7.03□□□□□ -1.28
PTCH1-216ENST00000548379 EDEM1Q92611 657 aa7.03□□□□□ -1.28
PTCH1-216ENST00000548379 DMRTB1Q96MA1 342 aa7.03□□□□□ -1.28
PTCH1-216ENST00000548379 SLC35F4A4IF30 521 aa7.02□□□□□ -1.29
PTCH1-216ENST00000548379 GPR182O15218 404 aa7.02□□□□□ -1.29
PTCH1-216ENST00000548379 THBS1P07996 1170 aa7.02□□□□□ -1.29
PTCH1-216ENST00000548379 GRNP28799 593 aaKnown RBP7.02□□□□□ -1.29
PTCH1-216ENST00000548379 USP5P45974 858 aa7.02□□□□□ -1.29
PTCH1-216ENST00000548379 IDH3AP50213 366 aa7.02□□□□□ -1.29
PTCH1-216ENST00000548379 LBRQ14739 615 aaKnown RBP7.02□□□□□ -1.29
PTCH1-216ENST00000548379 BTLAQ7Z6A9 289 aa7.02□□□□□ -1.29
PTCH1-216ENST00000548379 FAM13BQ9NYF5 915 aa7.02□□□□□ -1.29
PTCH1-216ENST00000548379 UNCXA6NJT0 531 aa7.01□□□□□ -1.29
PTCH1-216ENST00000548379 MAN1A2O60476 641 aa7.01□□□□□ -1.29
PTCH1-216ENST00000548379 ZNF16P17020 682 aaPredicted RBP7.01□□□□□ -1.29
PTCH1-216ENST00000548379 DNM1Q05193 864 aaKnown RBP7.01□□□□□ -1.29
PTCH1-216ENST00000548379 TYRO3Q06418 890 aa7.01□□□□□ -1.29
PTCH1-216ENST00000548379 PDE3BQ13370 1112 aa7.01□□□□□ -1.29
PTCH1-216ENST00000548379 AAMPQ13685 434 aa7.01□□□□□ -1.29
PTCH1-216ENST00000548379 UBAP2LQ14157 1087 aaKnown RBP7.01□□□□□ -1.29
PTCH1-216ENST00000548379 ARSJQ5FYB0 599 aaPredicted RBP7.01□□□□□ -1.29
PTCH1-216ENST00000548379 LRRC69Q6ZNQ3 347 aa7.01□□□□□ -1.29
PTCH1-216ENST00000548379 GPR152Q8TDT2 470 aa7.01□□□□□ -1.29
PTCH1-216ENST00000548379 TRIM47Q96LD4 638 aa7.01□□□□□ -1.29
PTCH1-216ENST00000548379 SOBPA7XYQ1 873 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 P4HBP07237 508 aaKnown RBP7□□□□□ -1.29
PTCH1-216ENST00000548379 ARSDP51689 593 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 PTSQ03393 145 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 KIFC2Q96AC6 838 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 NUDT16Q96DE0 195 aaKnown RBP7□□□□□ -1.29
PTCH1-216ENST00000548379 BCL2L13Q9BXK5 485 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 IRX2Q9BZI1 471 aaPredicted RBP7□□□□□ -1.29
PTCH1-216ENST00000548379 GGNBP2Q9H3C7 697 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 RUBCNLQ9H714 662 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 SENP2Q9HC62 589 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 GPAMQ9HCL2 828 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 C11orf16Q9NQ32 467 aa7□□□□□ -1.29
PTCH1-216ENST00000548379 LCE2BO14633 110 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms