RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 ZPR1O75312 459 aa9.18□□□□□ -0.94
RNF41-204ENST00000548120 COL5A3P25940 1745 aaPredicted RBP9.18□□□□□ -0.94
RNF41-204ENST00000548120 PDE4DIPQ5VU43 2346 aa9.18□□□□□ -0.94
RNF41-204ENST00000548120 IFNL2Q8IZJ0 200 aa9.18□□□□□ -0.94
RNF41-204ENST00000548120 ZNF622Q969S3 477 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNF41-204ENST00000548120 HACL1Q9UJ83 578 aa9.18□□□□□ -0.94
RNF41-204ENST00000548120 RNF123Q5XPI4 1314 aa9.17□□□□□ -0.94
RNF41-204ENST00000548120 ZNF541Q9H0D2 1346 aa9.17□□□□□ -0.94
RNF41-204ENST00000548120 EPHX2P34913 555 aa9.17□□□□□ -0.94
RNF41-204ENST00000548120 NFIXQ14938 502 aa9.17□□□□□ -0.94
RNF41-204ENST00000548120 GGNBP2Q9H3C7 697 aa9.17□□□□□ -0.94
RNF41-204ENST00000548120 DDX21Q9NR30 783 aaKnown RBP eCLIP9.17□□□□□ -0.94
RNF41-204ENST00000548120 LTBP3Q9NS15 1303 aa9.16□□□□□ -0.94
RNF41-204ENST00000548120 POTEB2H3BUK9 544 aa9.16□□□□□ -0.94
RNF41-204ENST00000548120 SERPINB2P05120 415 aa9.16□□□□□ -0.94
RNF41-204ENST00000548120 FMR1Q06787 632 aaKnown RBP eCLIP9.16□□□□□ -0.94
RNF41-204ENST00000548120 CARD11Q9BXL7 1154 aa9.16□□□□□ -0.94
RNF41-204ENST00000548120 NCAPD2Q15021 1401 aa9.15□□□□□ -0.94
RNF41-204ENST00000548120 DLEC1Q9Y238 1755 aa9.15□□□□□ -0.94
RNF41-204ENST00000548120 CA12O43570 354 aa9.15□□□□□ -0.94
RNF41-204ENST00000548120 PNMA8AQ86V59 439 aaPredicted RBP9.15□□□□□ -0.94
RNF41-204ENST00000548120 ZNF831Q5JPB2 1677 aa9.15□□□□□ -0.94
RNF41-204ENST00000548120 ADAMTSL1Q8N6G6 1762 aa9.14□□□□□ -0.95
RNF41-204ENST00000548120 BICDL1Q6ZP65 573 aa9.14□□□□□ -0.95
RNF41-204ENST00000548120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.95
RNF41-204ENST00000548120 EMILIN1Q9Y6C2 1016 aa9.14□□□□□ -0.95
RNF41-204ENST00000548120 ERVV-2B6SEH9 535 aa9.13□□□□□ -0.95
RNF41-204ENST00000548120 PPM1GO15355 546 aaPredicted RBP9.13□□□□□ -0.95
RNF41-204ENST00000548120 MAP2K2P36507 400 aa9.13□□□□□ -0.95
RNF41-204ENST00000548120 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
RNF41-204ENST00000548120 CABP4P57796 275 aa9.13□□□□□ -0.95
RNF41-204ENST00000548120 INTS5Q6P9B9 1019 aaKnown RBP9.13□□□□□ -0.95
RNF41-204ENST00000548120 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
RNF41-204ENST00000548120 GCC1Q96CN9 775 aa9.13□□□□□ -0.95
RNF41-204ENST00000548120 GTF3C3Q9Y5Q9 886 aa9.13□□□□□ -0.95
RNF41-204ENST00000548120 COL15A1P39059 1388 aa9.12□□□□□ -0.95
RNF41-204ENST00000548120 KIF24Q5T7B8 1368 aa9.12□□□□□ -0.95
RNF41-204ENST00000548120 SOS1Q07889 1333 aaPredicted RBP9.12□□□□□ -0.95
RNF41-204ENST00000548120 TRAF5O00463 557 aa9.12□□□□□ -0.95
RNF41-204ENST00000548120 FYB1O15117 783 aa9.12□□□□□ -0.95
RNF41-204ENST00000548120 BRPF1P55201 1214 aaPredicted RBP9.12□□□□□ -0.95
RNF41-204ENST00000548120 HABP4Q5JVS0 413 aaKnown RBP9.12□□□□□ -0.95
RNF41-204ENST00000548120 PRPF40BQ6NWY9 871 aaKnown RBP9.12□□□□□ -0.95
RNF41-204ENST00000548120 TLL2Q9Y6L7 1015 aa9.12□□□□□ -0.95
RNF41-204ENST00000548120 NRXN2Q9P2S2 1712 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 ADAMTS7Q9UKP4 1686 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 SCN4AP35499 1836 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 ST20-MTHFSA0A0A6YYL1 179 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 PDE6BP35913 854 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 CIAPIN1Q6FI81 312 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 EYA1Q99502 592 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 BCL2L12Q9HB09 334 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 NARFQ9UHQ1 456 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 MYH14Q7Z406 1995 aaKnown RBP9.11□□□□□ -0.95
RNF41-204ENST00000548120 TJP1Q07157 1748 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 CCDC88AQ3V6T2 1871 aa9.11□□□□□ -0.95
RNF41-204ENST00000548120 POTEMA6NI47 508 aa9.1□□□□□ -0.95
RNF41-204ENST00000548120 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
RNF41-204ENST00000548120 CST9Q5W186 159 aa9.1□□□□□ -0.95
RNF41-204ENST00000548120 DNAJC10Q8IXB1 793 aa9.1□□□□□ -0.95
RNF41-204ENST00000548120 SLC39A7Q92504 469 aa9.1□□□□□ -0.95
RNF41-204ENST00000548120 MS4A3Q96HJ5 214 aa9.1□□□□□ -0.95
RNF41-204ENST00000548120 ZNF277Q9NRM2 450 aaPredicted RBP9.1□□□□□ -0.95
RNF41-204ENST00000548120 METRNQ9UJH8 293 aa9.1□□□□□ -0.95
RNF41-204ENST00000548120 COL11A2P13942 1736 aaPredicted RBP9.1□□□□□ -0.95
RNF41-204ENST00000548120 FER1L6Q2WGJ9 1857 aa9.09□□□□□ -0.95
RNF41-204ENST00000548120 NPHP1O15259 732 aa9.09□□□□□ -0.95
RNF41-204ENST00000548120 HSP90AB1P08238 724 aaKnown RBP9.09□□□□□ -0.95
RNF41-204ENST00000548120 CCDC93Q567U6 631 aa9.09□□□□□ -0.95
RNF41-204ENST00000548120 ASTLQ6HA08 431 aaPredicted RBP9.09□□□□□ -0.95
RNF41-204ENST00000548120 PRR5LQ6MZQ0 368 aa9.09□□□□□ -0.95
RNF41-204ENST00000548120 CNKSR1Q969H4 720 aa9.09□□□□□ -0.95
RNF41-204ENST00000548120 BRIP1Q9BX63 1249 aa9.09□□□□□ -0.95
RNF41-204ENST00000548120 PRKRIP1Q9H875 184 aaPredicted RBP9.09□□□□□ -0.95
RNF41-204ENST00000548120 ZBTB1Q9Y2K1 713 aa9.09□□□□□ -0.95
RNF41-204ENST00000548120 AFDNP55196 1824 aaKnown RBP9.09□□□□□ -0.95
RNF41-204ENST00000548120 DICER1Q9UPY3 1922 aaKnown RBP9.08□□□□□ -0.96
RNF41-204ENST00000548120 CELF2O95319 508 aaKnown RBP9.08□□□□□ -0.96
RNF41-204ENST00000548120 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
RNF41-204ENST00000548120 ZNF530Q6P9A1 599 aaPredicted RBP9.08□□□□□ -0.96
RNF41-204ENST00000548120 SAPCD2Q86UD0 394 aa9.08□□□□□ -0.96
RNF41-204ENST00000548120 GPC2Q8N158 579 aa9.08□□□□□ -0.96
RNF41-204ENST00000548120 ZNF408Q9H9D4 720 aa9.08□□□□□ -0.96
RNF41-204ENST00000548120 PDZRN3Q9UPQ7 1066 aa9.08□□□□□ -0.96
RNF41-204ENST00000548120 GJA3Q9Y6H8 435 aa9.08□□□□□ -0.96
RNF41-204ENST00000548120 ATMINO43313 823 aaPredicted RBP9.07□□□□□ -0.96
RNF41-204ENST00000548120 C7P10643 843 aa9.07□□□□□ -0.96
RNF41-204ENST00000548120 FKBP4Q02790 459 aaKnown RBP eCLIP9.07□□□□□ -0.96
RNF41-204ENST00000548120 TBC1D9BQ66K14 1250 aa9.07□□□□□ -0.96
RNF41-204ENST00000548120 NFATC2IPQ8NCF5 419 aa9.07□□□□□ -0.96
RNF41-204ENST00000548120 PUS7Q96PZ0 661 aaKnown RBP9.07□□□□□ -0.96
RNF41-204ENST00000548120 TESK2Q96S53 571 aa9.07□□□□□ -0.96
RNF41-204ENST00000548120 ZIC5Q96T25 663 aa9.07□□□□□ -0.96
RNF41-204ENST00000548120 DLL1O00548 723 aa9.06□□□□□ -0.96
RNF41-204ENST00000548120 MTHFSP49914 203 aa9.06□□□□□ -0.96
RNF41-204ENST00000548120 STYK1Q6J9G0 422 aa9.06□□□□□ -0.96
RNF41-204ENST00000548120 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
RNF41-204ENST00000548120 OLFM4Q6UX06 510 aa9.06□□□□□ -0.96
RNF41-204ENST00000548120 CNBD1Q8NA66 436 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms