RNA–Protein interactions for RNA: ENST00000547606.1

C12orf49-202, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 3

Gene C12orf49, Length 492 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-202ENST00000547606 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
C12orf49-202ENST00000547606 GYS1P13807 737 aa17.21■□□□□ 0.35
C12orf49-202ENST00000547606 USPL1Q5W0Q7 1092 aa17.21■□□□□ 0.35
C12orf49-202ENST00000547606 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
C12orf49-202ENST00000547606 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.34
C12orf49-202ENST00000547606 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
C12orf49-202ENST00000547606 ARFGEF1Q9Y6D6 1849 aa17.2■□□□□ 0.34
C12orf49-202ENST00000547606 C8orf58Q8NAV2 365 aa17.2■□□□□ 0.34
C12orf49-202ENST00000547606 RBM46Q8TBY0 533 aaKnown RBP17.2■□□□□ 0.34
C12orf49-202ENST00000547606 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
C12orf49-202ENST00000547606 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
C12orf49-202ENST00000547606 ANXA1P04083 346 aa17.19■□□□□ 0.34
C12orf49-202ENST00000547606 FKBP8Q14318 412 aa17.19■□□□□ 0.34
C12orf49-202ENST00000547606 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
C12orf49-202ENST00000547606 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
C12orf49-202ENST00000547606 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
C12orf49-202ENST00000547606 PXDNLA1KZ92 1463 aa17.18■□□□□ 0.34
C12orf49-202ENST00000547606 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
C12orf49-202ENST00000547606 NLGN1Q8N2Q7 840 aa17.18■□□□□ 0.34
C12orf49-202ENST00000547606 MYH16Q9H6N6 1097 aa17.18■□□□□ 0.34
C12orf49-202ENST00000547606 MMP10P09238 476 aa17.17■□□□□ 0.34
C12orf49-202ENST00000547606 HOXB7P09629 217 aa17.17■□□□□ 0.34
C12orf49-202ENST00000547606 HNRNPUQ00839 825 aaKnown RBP eCLIP17.17■□□□□ 0.34
C12orf49-202ENST00000547606 GOLGA2Q08379 1002 aa17.17■□□□□ 0.34
C12orf49-202ENST00000547606 PROSER3Q2NL68 480 aa17.17■□□□□ 0.34
C12orf49-202ENST00000547606 TSPYL6Q8N831 410 aa17.17■□□□□ 0.34
C12orf49-202ENST00000547606 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
C12orf49-202ENST00000547606 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
C12orf49-202ENST00000547606 SBF1O95248 1867 aa17.16■□□□□ 0.34
C12orf49-202ENST00000547606 PDIA6Q15084 440 aa17.16■□□□□ 0.34
C12orf49-202ENST00000547606 BCL2L12Q9HB09 334 aa17.16■□□□□ 0.34
C12orf49-202ENST00000547606 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
C12orf49-202ENST00000547606 SLC34A2O95436 690 aa17.15■□□□□ 0.34
C12orf49-202ENST00000547606 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
C12orf49-202ENST00000547606 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
C12orf49-202ENST00000547606 BICDL1Q6ZP65 573 aa17.15■□□□□ 0.34
C12orf49-202ENST00000547606 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
C12orf49-202ENST00000547606 SCN7AQ01118 1682 aa17.15■□□□□ 0.34
C12orf49-202ENST00000547606 FSTL1Q12841 308 aa17.14■□□□□ 0.33
C12orf49-202ENST00000547606 KIF6Q6ZMV9 814 aa17.14■□□□□ 0.33
C12orf49-202ENST00000547606 TTLL7Q6ZT98 887 aa17.14■□□□□ 0.33
C12orf49-202ENST00000547606 ARHGAP27Q6ZUM4 889 aa17.14■□□□□ 0.33
C12orf49-202ENST00000547606 PARP3Q9Y6F1 533 aa17.14■□□□□ 0.33
C12orf49-202ENST00000547606 E9PSI1 815 aa17.13■□□□□ 0.33
C12orf49-202ENST00000547606 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
C12orf49-202ENST00000547606 HSPA1AP0DMV8 641 aaKnown RBP17.13■□□□□ 0.33
C12orf49-202ENST00000547606 HSPA1BP0DMV9 641 aaKnown RBP17.13■□□□□ 0.33
C12orf49-202ENST00000547606 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
C12orf49-202ENST00000547606 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
C12orf49-202ENST00000547606 ZBTB3Q9H5J0 574 aa17.13■□□□□ 0.33
C12orf49-202ENST00000547606 DDX21Q9NR30 783 aaKnown RBP eCLIP17.13■□□□□ 0.33
C12orf49-202ENST00000547606 BCORQ6W2J9 1755 aa17.12■□□□□ 0.33
C12orf49-202ENST00000547606 DDR1Q08345 913 aa17.12■□□□□ 0.33
C12orf49-202ENST00000547606 NFIXQ14938 502 aa17.12■□□□□ 0.33
C12orf49-202ENST00000547606 CCDC30Q5VVM6 783 aa17.12■□□□□ 0.33
C12orf49-202ENST00000547606 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
C12orf49-202ENST00000547606 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
C12orf49-202ENST00000547606 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
C12orf49-202ENST00000547606 SLFN5Q08AF3 891 aa17.11■□□□□ 0.33
C12orf49-202ENST00000547606 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
C12orf49-202ENST00000547606 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
C12orf49-202ENST00000547606 ZNF652Q9Y2D9 606 aa17.11■□□□□ 0.33
C12orf49-202ENST00000547606 MAP3K15Q6ZN16 1313 aa17.11■□□□□ 0.33
C12orf49-202ENST00000547606 A0A0G2JLW4 131 aa17.1■□□□□ 0.33
C12orf49-202ENST00000547606 TM4SF1P30408 202 aa17.1■□□□□ 0.33
C12orf49-202ENST00000547606 HLFQ16534 295 aa17.1■□□□□ 0.33
C12orf49-202ENST00000547606 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
C12orf49-202ENST00000547606 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
C12orf49-202ENST00000547606 C9orf131Q5VYM1 1079 aa17.09■□□□□ 0.33
C12orf49-202ENST00000547606 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
C12orf49-202ENST00000547606 CHMP4AQ9BY43 222 aa17.09■□□□□ 0.33
C12orf49-202ENST00000547606 CCDC88AQ3V6T2 1871 aa17.08■□□□□ 0.33
C12orf49-202ENST00000547606 SETDB2Q96T68 719 aa17.08■□□□□ 0.32
C12orf49-202ENST00000547606 PHAXQ9H814 394 aaKnown RBP17.08■□□□□ 0.32
C12orf49-202ENST00000547606 C10orf71Q711Q0 1435 aa17.07■□□□□ 0.32
C12orf49-202ENST00000547606 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
C12orf49-202ENST00000547606 VAMP4O75379 141 aa17.07■□□□□ 0.32
C12orf49-202ENST00000547606 SERPINB2P05120 415 aa17.07■□□□□ 0.32
C12orf49-202ENST00000547606 CLEC4GQ6UXB4 293 aa17.07■□□□□ 0.32
C12orf49-202ENST00000547606 RRAGCQ9HB90 399 aa17.07■□□□□ 0.32
C12orf49-202ENST00000547606 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
C12orf49-202ENST00000547606 CARMIL3Q8ND23 1372 aa17.06■□□□□ 0.32
C12orf49-202ENST00000547606 KDM2BQ8NHM5 1336 aa17.06■□□□□ 0.32
C12orf49-202ENST00000547606 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
C12orf49-202ENST00000547606 NPHP1O15259 732 aa17.06■□□□□ 0.32
C12orf49-202ENST00000547606 GPTP24298 496 aa17.06■□□□□ 0.32
C12orf49-202ENST00000547606 TGFB2P61812 414 aa17.06■□□□□ 0.32
C12orf49-202ENST00000547606 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
C12orf49-202ENST00000547606 RGL2O15211 777 aa17.04■□□□□ 0.32
C12orf49-202ENST00000547606 DPEP1P16444 411 aa17.04■□□□□ 0.32
C12orf49-202ENST00000547606 GIGYF2Q6Y7W6 1299 aaKnown RBP17.04■□□□□ 0.32
C12orf49-202ENST00000547606 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
C12orf49-202ENST00000547606 CCDC24Q8N4L8 307 aa17.04■□□□□ 0.32
C12orf49-202ENST00000547606 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
C12orf49-202ENST00000547606 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
C12orf49-202ENST00000547606 G2E3Q7L622 706 aa17.03■□□□□ 0.32
C12orf49-202ENST00000547606 NBPF5PQ86XG9 351 aaPredicted RBP17.03■□□□□ 0.32
C12orf49-202ENST00000547606 TRMT2AQ8IZ69 625 aaKnown RBP17.03■□□□□ 0.32
C12orf49-202ENST00000547606 CNBD1Q8NA66 436 aa17.03■□□□□ 0.32
C12orf49-202ENST00000547606 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms