RNA–Protein interactions for RNA: ENST00000547329.1

LRIG3-204, Transcript of leucine rich repeats and immunoglobulin like domains 3, human

TSL 3

Gene LRIG3, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRIG3-204	ENST00000547329	SLC39A6	Q13433	755 aa		10.92	□□□□□ -0.66
LRIG3-204	ENST00000547329	ZNF710	Q8N1W2	664 aa		10.92	□□□□□ -0.66
LRIG3-204	ENST00000547329	SYT17	Q9BSW7	474 aa		10.92	□□□□□ -0.66
LRIG3-204	ENST00000547329	STK32B	Q9NY57	414 aa		10.92	□□□□□ -0.66
LRIG3-204	ENST00000547329	HSP90AB1	P08238	724 aa	Known RBP	10.91	□□□□□ -0.66
LRIG3-204	ENST00000547329	DCTN1	Q14203	1278 aa		10.91	□□□□□ -0.66
LRIG3-204	ENST00000547329	DOK7	Q18PE1	504 aa		10.91	□□□□□ -0.66
LRIG3-204	ENST00000547329	AFDN	P55196	1824 aa	Known RBP	10.91	□□□□□ -0.66
LRIG3-204	ENST00000547329	KCNQ3	O43525	872 aa		10.9	□□□□□ -0.66
LRIG3-204	ENST00000547329	FCHSD2	O94868	740 aa		10.9	□□□□□ -0.66
LRIG3-204	ENST00000547329	CABP4	P57796	275 aa		10.9	□□□□□ -0.66
LRIG3-204	ENST00000547329	MCM10	Q7L590	875 aa		10.9	□□□□□ -0.66
LRIG3-204	ENST00000547329	COL23A1	Q86Y22	540 aa	Predicted RBP	10.9	□□□□□ -0.66
LRIG3-204	ENST00000547329	GAS2L2	Q8NHY3	880 aa		10.9	□□□□□ -0.66
LRIG3-204	ENST00000547329	SMARCC1	Q92922	1105 aa	Predicted RBP	10.9	□□□□□ -0.66
LRIG3-204	ENST00000547329	NRXN2	Q9P2S2	1712 aa		10.89	□□□□□ -0.67
LRIG3-204	ENST00000547329	BRCA1	P38398	1863 aa	Known RBP	10.89	□□□□□ -0.67
LRIG3-204	ENST00000547329	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.89	□□□□□ -0.67
LRIG3-204	ENST00000547329	GNAT3	A8MTJ3	354 aa		10.89	□□□□□ -0.67
LRIG3-204	ENST00000547329	ZFP91	Q96JP5	570 aa	Predicted RBP	10.89	□□□□□ -0.67
LRIG3-204	ENST00000547329	THUMPD2	Q9BTF0	503 aa	Known RBP	10.89	□□□□□ -0.67
LRIG3-204	ENST00000547329	CNTNAP4	Q9C0A0	1308 aa		10.88	□□□□□ -0.67
LRIG3-204	ENST00000547329	PTCD1	O75127	700 aa	Known RBP	10.88	□□□□□ -0.67
LRIG3-204	ENST00000547329	ATP6V1A	P38606	617 aa		10.88	□□□□□ -0.67
LRIG3-204	ENST00000547329	CCDC146	Q8IYE0	955 aa		10.88	□□□□□ -0.67
LRIG3-204	ENST00000547329	NUDC	Q9Y266	331 aa		10.88	□□□□□ -0.67
LRIG3-204	ENST00000547329	PRAMEF22	A3QJZ6	481 aa		10.87	□□□□□ -0.67
LRIG3-204	ENST00000547329	DNAJC10	Q8IXB1	793 aa		10.87	□□□□□ -0.67
LRIG3-204	ENST00000547329	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.87	□□□□□ -0.67
LRIG3-204	ENST00000547329	NFE2L2	Q16236	605 aa		10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	ZNF496	Q96IT1	587 aa	Predicted RBP	10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	MTFR1L	Q9H019	292 aa		10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	TFCP2L1	Q9NZI6	479 aa		10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	TAOK2	Q9UL54	1235 aa		10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	ADAMTS8	Q9UP79	889 aa		10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	ANKRD31	Q8N7Z5	1873 aa		10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	HEG1	Q9ULI3	1381 aa		10.86	□□□□□ -0.67
LRIG3-204	ENST00000547329	COL11A2	P13942	1736 aa	Predicted RBP	10.85	□□□□□ -0.67
LRIG3-204	ENST00000547329	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.85	□□□□□ -0.67
LRIG3-204	ENST00000547329	RIMBP2	O15034	1052 aa		10.85	□□□□□ -0.67
LRIG3-204	ENST00000547329	GNPAT	O15228	680 aa		10.85	□□□□□ -0.67
LRIG3-204	ENST00000547329	PHF14	O94880	888 aa		10.85	□□□□□ -0.67
LRIG3-204	ENST00000547329	MSL1	Q68DK7	614 aa		10.85	□□□□□ -0.67
LRIG3-204	ENST00000547329	INTS5	Q6P9B9	1019 aa	Known RBP	10.85	□□□□□ -0.67
LRIG3-204	ENST00000547329	DLEC1	Q9Y238	1755 aa		10.85	□□□□□ -0.67
LRIG3-204	ENST00000547329	CYP19A1	P11511	503 aa	Predicted RBP	10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	CRKL	P46109	303 aa	Known RBP	10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	ZNF790	Q6PG37	636 aa		10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	EFCAB3	Q8N7B9	438 aa		10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	DNAJC5G	Q8N7S2	189 aa		10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	AK7	Q96M32	723 aa		10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	ZBTB1	Q9Y2K1	713 aa		10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	RRP7A	Q9Y3A4	280 aa	Known RBP	10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	SOS1	Q07889	1333 aa	Predicted RBP	10.84	□□□□□ -0.67
LRIG3-204	ENST00000547329	RGL2	O15211	777 aa		10.83	□□□□□ -0.68
LRIG3-204	ENST00000547329	SSFA2	P28290	1259 aa		10.83	□□□□□ -0.68
LRIG3-204	ENST00000547329	TMPO	P42166	694 aa	Known RBP	10.83	□□□□□ -0.68
LRIG3-204	ENST00000547329	RNF166	Q96A37	237 aa	Predicted RBP	10.83	□□□□□ -0.68
LRIG3-204	ENST00000547329	MIS18A	Q9NYP9	233 aa		10.83	□□□□□ -0.68
LRIG3-204	ENST00000547329	NUP98	P52948	1817 aa		10.82	□□□□□ -0.68
LRIG3-204	ENST00000547329	COL15A1	P39059	1388 aa		10.82	□□□□□ -0.68
LRIG3-204	ENST00000547329	TEF	Q10587	303 aa		10.82	□□□□□ -0.68
LRIG3-204	ENST00000547329	SRP68	Q9UHB9	627 aa	Known RBP	10.82	□□□□□ -0.68
LRIG3-204	ENST00000547329	ANKRD36C	Q5JPF3	1778 aa		10.82	□□□□□ -0.68
LRIG3-204	ENST00000547329	PIP4K2A	P48426	406 aa	Predicted RBP	10.81	□□□□□ -0.68
LRIG3-204	ENST00000547329	VARS2	Q5ST30	1063 aa	Known RBP	10.81	□□□□□ -0.68
LRIG3-204	ENST00000547329	RC3H1	Q5TC82	1133 aa	Known RBP	10.81	□□□□□ -0.68
LRIG3-204	ENST00000547329	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.81	□□□□□ -0.68
LRIG3-204	ENST00000547329	C10orf71	Q711Q0	1435 aa		10.81	□□□□□ -0.68
LRIG3-204	ENST00000547329	USP42	Q9H9J4	1324 aa	Known RBP	10.81	□□□□□ -0.68
LRIG3-204	ENST00000547329	MAPK8IP3	Q9UPT6	1336 aa		10.81	□□□□□ -0.68
LRIG3-204	ENST00000547329	BTBD11	A6QL63	1104 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	HTATSF1	O43719	755 aa	Known RBP	10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	RPS6KA4	O75676	772 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	GYS1	P13807	737 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	TNS4	Q8IZW8	715 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	VSIG10	Q8N0Z9	540 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	NLGN2	Q8NFZ4	835 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	PNISR	Q8TF01	805 aa	Known RBP	10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	SLC16A10	Q8TF71	515 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	ARHGEF1	Q92888	912 aa	Known RBP	10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	BCL2L12	Q9HB09	334 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	CCDC87	Q9NVE4	849 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	CACNA1S	Q13698	1873 aa		10.8	□□□□□ -0.68
LRIG3-204	ENST00000547329	RIPK4	P57078	832 aa		10.79	□□□□□ -0.68
LRIG3-204	ENST00000547329	KRT24	Q2M2I5	525 aa		10.79	□□□□□ -0.68
LRIG3-204	ENST00000547329	RUNDC1	Q96C34	613 aa		10.79	□□□□□ -0.68
LRIG3-204	ENST00000547329	USP16	Q9Y5T5	823 aa		10.79	□□□□□ -0.68
LRIG3-204	ENST00000547329	PXDNL	A1KZ92	1463 aa		10.79	□□□□□ -0.68
LRIG3-204	ENST00000547329	PCNT	O95613	3336 aa		10.79	□□□□□ -0.68
LRIG3-204	ENST00000547329	ARFGEF2	Q9Y6D5	1785 aa		10.78	□□□□□ -0.68
LRIG3-204	ENST00000547329	NBPF26	B4DH59	902 aa		10.78	□□□□□ -0.68
LRIG3-204	ENST00000547329	APLP1	P51693	650 aa		10.78	□□□□□ -0.68
LRIG3-204	ENST00000547329	DDR1	Q08345	913 aa		10.78	□□□□□ -0.68
LRIG3-204	ENST00000547329	WDR43	Q15061	677 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
LRIG3-204	ENST00000547329	NBPF10	Q6P3W6	841 aa	Known RBP	10.78	□□□□□ -0.68
LRIG3-204	ENST00000547329	NBPF15	Q8N660	670 aa		10.78	□□□□□ -0.68
LRIG3-204	ENST00000547329	ARX	Q96QS3	562 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms