RNA–Protein interactions for RNA: ENST00000547273.1

PPFIA2-208, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 371 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-208ENST00000547273 SMARCC1Q92922 1105 aaPredicted RBP10.44□□□□□ -0.74
PPFIA2-208ENST00000547273 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
PPFIA2-208ENST00000547273 KCNQ2O43526 872 aa10.43□□□□□ -0.74
PPFIA2-208ENST00000547273 CENPBP07199 599 aaPredicted RBP10.43□□□□□ -0.74
PPFIA2-208ENST00000547273 HOXB7P09629 217 aa10.43□□□□□ -0.74
PPFIA2-208ENST00000547273 EIF4A1P60842 406 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-208ENST00000547273 FMNL2Q96PY5 1086 aa10.43□□□□□ -0.74
PPFIA2-208ENST00000547273 ATG3Q9NT62 314 aa10.43□□□□□ -0.74
PPFIA2-208ENST00000547273 ASAP1Q9ULH1 1129 aa10.43□□□□□ -0.74
PPFIA2-208ENST00000547273 N4BP2Q86UW6 1770 aaPredicted RBP10.42□□□□□ -0.74
PPFIA2-208ENST00000547273 NUP188Q5SRE5 1749 aa10.42□□□□□ -0.74
PPFIA2-208ENST00000547273 EP400Q96L91 3159 aa10.42□□□□□ -0.74
PPFIA2-208ENST00000547273 KCNQ3O43525 872 aa10.42□□□□□ -0.74
PPFIA2-208ENST00000547273 EXOSC9Q06265 439 aaKnown RBP10.42□□□□□ -0.74
PPFIA2-208ENST00000547273 ZNF496Q96IT1 587 aaPredicted RBP10.42□□□□□ -0.74
PPFIA2-208ENST00000547273 C4BP0C0L5 1744 aa10.41□□□□□ -0.74
PPFIA2-208ENST00000547273 TRIM37O94972 964 aa10.41□□□□□ -0.74
PPFIA2-208ENST00000547273 KRT24Q2M2I5 525 aa10.41□□□□□ -0.74
PPFIA2-208ENST00000547273 TWISTNBQ3B726 338 aaPredicted RBP10.41□□□□□ -0.74
PPFIA2-208ENST00000547273 PTF1AQ7RTS3 328 aa10.41□□□□□ -0.74
PPFIA2-208ENST00000547273 VSIG10Q8N0Z9 540 aa10.41□□□□□ -0.74
PPFIA2-208ENST00000547273 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
PPFIA2-208ENST00000547273 TUBGCP6Q96RT7 1819 aa10.4□□□□□ -0.74
PPFIA2-208ENST00000547273 MYH14Q7Z406 1995 aaKnown RBP10.4□□□□□ -0.74
PPFIA2-208ENST00000547273 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
PPFIA2-208ENST00000547273 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.74
PPFIA2-208ENST00000547273 BCORQ6W2J9 1755 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 C4AP0C0L4 1744 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 QSER1Q2KHR3 1735 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 UBR3Q6ZT12 1888 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 SCN7AQ01118 1682 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 LOC102724428A0A0B4J2F2 783 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 GIGYF1O75420 1035 aaPredicted RBP10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 SNRPA1P09661 255 aaKnown RBP10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 SIK1P57059 783 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 TSPYL6Q8N831 410 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 CHMP4AQ9BY43 222 aa10.39□□□□□ -0.75
PPFIA2-208ENST00000547273 ERBB4Q15303 1308 aa10.38□□□□□ -0.75
PPFIA2-208ENST00000547273 VAMP4O75379 141 aa10.38□□□□□ -0.75
PPFIA2-208ENST00000547273 HDGFL1Q5TGJ6 251 aa10.38□□□□□ -0.75
PPFIA2-208ENST00000547273 TEX13AQ9BXU3 409 aaPredicted RBP10.38□□□□□ -0.75
PPFIA2-208ENST00000547273 ARFGEF2Q9Y6D5 1785 aa10.38□□□□□ -0.75
PPFIA2-208ENST00000547273 ANKRD36CQ5JPF3 1778 aa10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 ELL2O00472 640 aaPredicted RBP10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 PPP1R37O75864 691 aa10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 SLC27A3Q5K4L6 730 aa10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 CCDC30Q5VVM6 783 aa10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 PAXIP1Q6ZW49 1069 aaPredicted RBP10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 SLC4A9Q96Q91 983 aa10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 CCNL1Q9UK58 526 aaPredicted RBP10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 RCAN3Q9UKA8 241 aa10.37□□□□□ -0.75
PPFIA2-208ENST00000547273 KIF16BQ96L93 1317 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 CNTNAP4Q9C0A0 1308 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 PRAMEF22A3QJZ6 481 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 PLSCR1O15162 318 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 APBA3O96018 575 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 ATP6V1AP38606 617 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 RARSP54136 660 aaKnown RBP10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 SF3B2Q13435 895 aaKnown RBP10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 DNAJC10Q8IXB1 793 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 SLAIN1Q8ND83 568 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 STK31Q9BXU1 1019 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 SMC4Q9NTJ3 1288 aa10.36□□□□□ -0.75
PPFIA2-208ENST00000547273 STARD3NLO95772 234 aa10.35□□□□□ -0.75
PPFIA2-208ENST00000547273 ITPK1Q13572 414 aa10.35□□□□□ -0.75
PPFIA2-208ENST00000547273 SSH1Q8WYL5 1049 aa10.35□□□□□ -0.75
PPFIA2-208ENST00000547273 PXDNLA1KZ92 1463 aa10.35□□□□□ -0.75
PPFIA2-208ENST00000547273 CYP19A1P11511 503 aaPredicted RBP10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 EIF2S2P20042 333 aaKnown RBP10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 HMGB2P26583 209 aaKnown RBP10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 BAG6P46379 1132 aa10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 BCL2L13Q9BXK5 485 aa10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 CHPF2Q9P2E5 772 aa10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 USP16Q9Y5T5 823 aa10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 AFDNP55196 1824 aaKnown RBP10.34□□□□□ -0.75
PPFIA2-208ENST00000547273 SNPHO15079 494 aa10.33□□□□□ -0.76
PPFIA2-208ENST00000547273 CRKLP46109 303 aaKnown RBP10.33□□□□□ -0.76
PPFIA2-208ENST00000547273 BRPF1P55201 1214 aaPredicted RBP10.33□□□□□ -0.76
PPFIA2-208ENST00000547273 TXNRD1Q16881 649 aa10.33□□□□□ -0.76
PPFIA2-208ENST00000547273 LINC00116Q8NCU8 138 aa10.33□□□□□ -0.76
PPFIA2-208ENST00000547273 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
PPFIA2-208ENST00000547273 DDX21Q9NR30 783 aaKnown RBP eCLIP10.33□□□□□ -0.76
PPFIA2-208ENST00000547273 CCDC87Q9NVE4 849 aa10.33□□□□□ -0.76
PPFIA2-208ENST00000547273 COL15A1P39059 1388 aa10.32□□□□□ -0.76
PPFIA2-208ENST00000547273 TCERG1O14776 1098 aaKnown RBP10.32□□□□□ -0.76
PPFIA2-208ENST00000547273 MRPL50Q8N5N7 158 aaKnown RBP10.32□□□□□ -0.76
PPFIA2-208ENST00000547273 LRRC4BQ9NT99 713 aa10.32□□□□□ -0.76
PPFIA2-208ENST00000547273 HYPKQ9NX55 129 aa10.32□□□□□ -0.76
PPFIA2-208ENST00000547273 ZBTB1Q9Y2K1 713 aa10.32□□□□□ -0.76
PPFIA2-208ENST00000547273 NUP98P52948 1817 aa10.32□□□□□ -0.76
PPFIA2-208ENST00000547273 PTPRCP08575 1304 aa10.32□□□□□ -0.76
PPFIA2-208ENST00000547273 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
PPFIA2-208ENST00000547273 BCAR3O75815 825 aa10.31□□□□□ -0.76
PPFIA2-208ENST00000547273 PDIA6Q15084 440 aa10.31□□□□□ -0.76
PPFIA2-208ENST00000547273 PROSER3Q2NL68 480 aa10.31□□□□□ -0.76
PPFIA2-208ENST00000547273 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms