RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 H3BM21 787 aa10.65□□□□□ -0.7
NPAS3-204ENST00000546849 FAM13AO94988 1023 aa10.65□□□□□ -0.7
NPAS3-204ENST00000546849 TXLNAP40222 546 aa10.65□□□□□ -0.7
NPAS3-204ENST00000546849 ARSJQ5FYB0 599 aaPredicted RBP10.65□□□□□ -0.7
NPAS3-204ENST00000546849 ABTB2Q8N961 1025 aa10.65□□□□□ -0.7
NPAS3-204ENST00000546849 QTRT2Q9H974 415 aaKnown RBP10.65□□□□□ -0.7
NPAS3-204ENST00000546849 GJA3Q9Y6H8 435 aa10.65□□□□□ -0.7
NPAS3-204ENST00000546849 GMPRP36959 345 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 DGKZQ13574 1117 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 COX20Q5RI15 118 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 ZNF295-AS1Q8N0V1 137 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 PGBD3Q8N328 593 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 MYO19Q96H55 970 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 SAP130Q9H0E3 1048 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 STIM2Q9P246 746 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
NPAS3-204ENST00000546849 BRD2P25440 801 aaKnown RBP10.63□□□□□ -0.71
NPAS3-204ENST00000546849 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
NPAS3-204ENST00000546849 POTEAQ6S8J7 498 aa10.63□□□□□ -0.71
NPAS3-204ENST00000546849 IRF7Q92985 503 aa10.63□□□□□ -0.71
NPAS3-204ENST00000546849 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
NPAS3-204ENST00000546849 LORP23490 312 aaPredicted RBP10.62□□□□□ -0.71
NPAS3-204ENST00000546849 MPSTP25325 297 aa10.62□□□□□ -0.71
NPAS3-204ENST00000546849 C11orf91Q3C1V1 193 aa10.62□□□□□ -0.71
NPAS3-204ENST00000546849 ALKBH2Q6NS38 261 aa10.62□□□□□ -0.71
NPAS3-204ENST00000546849 GAS2L1Q99501 681 aaPredicted RBP10.62□□□□□ -0.71
NPAS3-204ENST00000546849 GPAMQ9HCL2 828 aa10.62□□□□□ -0.71
NPAS3-204ENST00000546849 ERBB4Q15303 1308 aa10.61□□□□□ -0.71
NPAS3-204ENST00000546849 KLK14Q9P0G3 267 aa10.61□□□□□ -0.71
NPAS3-204ENST00000546849 ANKIB1Q9P2G1 1089 aa10.61□□□□□ -0.71
NPAS3-204ENST00000546849 GPC6Q9Y625 555 aaPredicted RBP10.61□□□□□ -0.71
NPAS3-204ENST00000546849 MSX1P28360 303 aa10.6□□□□□ -0.71
NPAS3-204ENST00000546849 NOM1Q5C9Z4 860 aaKnown RBP10.6□□□□□ -0.71
NPAS3-204ENST00000546849 MARSP56192 900 aaKnown RBP10.59□□□□□ -0.71
NPAS3-204ENST00000546849 RIPOR1Q6ZS17 1223 aa10.59□□□□□ -0.71
NPAS3-204ENST00000546849 IFT43Q96FT9 208 aa10.59□□□□□ -0.71
NPAS3-204ENST00000546849 LRFN2Q9ULH4 789 aa10.59□□□□□ -0.71
NPAS3-204ENST00000546849 DYRK1BQ9Y463 629 aa10.59□□□□□ -0.71
NPAS3-204ENST00000546849 NDUFB5O43674 189 aa10.58□□□□□ -0.72
NPAS3-204ENST00000546849 F11P03951 625 aa10.57□□□□□ -0.72
NPAS3-204ENST00000546849 MAPK1P28482 360 aa10.57□□□□□ -0.72
NPAS3-204ENST00000546849 EFHC2Q5JST6 749 aa10.57□□□□□ -0.72
NPAS3-204ENST00000546849 TTC16Q8NEE8 873 aa10.57□□□□□ -0.72
NPAS3-204ENST00000546849 BRPF3Q9ULD4 1205 aa10.57□□□□□ -0.72
NPAS3-204ENST00000546849 TNFRSF10BO14763 440 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 PCSK2P16519 638 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 ATP4AP20648 1035 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 EIF1AXP47813 144 aaKnown RBP10.56□□□□□ -0.72
NPAS3-204ENST00000546849 LRRC69Q6ZNQ3 347 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 TMC1Q8TDI8 760 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 HSH2DQ96JZ2 352 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 SUSD3Q96L08 255 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 RUBCNLQ9H714 662 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 FAM13BQ9NYF5 915 aa10.56□□□□□ -0.72
NPAS3-204ENST00000546849 TGFBR3LH3BV60 316 aa10.55□□□□□ -0.72
NPAS3-204ENST00000546849 A0A1W2PNR3 127 aa10.54□□□□□ -0.72
NPAS3-204ENST00000546849 PTSQ03393 145 aa10.54□□□□□ -0.72
NPAS3-204ENST00000546849 TREML1Q86YW5 311 aa10.54□□□□□ -0.72
NPAS3-204ENST00000546849 ZIC5Q96T25 663 aa10.54□□□□□ -0.72
NPAS3-204ENST00000546849 DCTN4Q9UJW0 460 aa10.54□□□□□ -0.72
NPAS3-204ENST00000546849 H7C1W4 665 aa10.53□□□□□ -0.72
NPAS3-204ENST00000546849 NPR3P17342 541 aa10.53□□□□□ -0.72
NPAS3-204ENST00000546849 ZAP70P43403 619 aa10.53□□□□□ -0.72
NPAS3-204ENST00000546849 ZSCAN29Q8IWY8 852 aaPredicted RBP10.53□□□□□ -0.72
NPAS3-204ENST00000546849 ZSCAN1Q8NBB4 408 aa10.53□□□□□ -0.72
NPAS3-204ENST00000546849 VSIG8P0DPA2 414 aa10.52□□□□□ -0.73
NPAS3-204ENST00000546849 EPB42P16452 691 aa10.52□□□□□ -0.73
NPAS3-204ENST00000546849 ETFBKMTQ8IXQ9 262 aa10.52□□□□□ -0.73
NPAS3-204ENST00000546849 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
NPAS3-204ENST00000546849 MICAL2O94851 1124 aa10.51□□□□□ -0.73
NPAS3-204ENST00000546849 ARHGAP4P98171 946 aa10.51□□□□□ -0.73
NPAS3-204ENST00000546849 DNM1Q05193 864 aaKnown RBP10.51□□□□□ -0.73
NPAS3-204ENST00000546849 IER5Q5VY09 327 aa10.51□□□□□ -0.73
NPAS3-204ENST00000546849 FIGNL1Q6PIW4 674 aa10.51□□□□□ -0.73
NPAS3-204ENST00000546849 CEP63Q96MT8 703 aa10.51□□□□□ -0.73
NPAS3-204ENST00000546849 IDH3AP50213 366 aa10.5□□□□□ -0.73
NPAS3-204ENST00000546849 ARSDP51689 593 aa10.5□□□□□ -0.73
NPAS3-204ENST00000546849 LBRQ14739 615 aaKnown RBP10.5□□□□□ -0.73
NPAS3-204ENST00000546849 NLRP8Q86W28 1048 aa10.5□□□□□ -0.73
NPAS3-204ENST00000546849 ATCAYQ86WG3 371 aa10.5□□□□□ -0.73
NPAS3-204ENST00000546849 CCDC155Q8N6L0 562 aa10.5□□□□□ -0.73
NPAS3-204ENST00000546849 ZNF280CQ8ND82 737 aa10.5□□□□□ -0.73
NPAS3-204ENST00000546849 PIK3R5Q8WYR1 880 aa10.5□□□□□ -0.73
NPAS3-204ENST00000546849 EDEM1Q92611 657 aa10.5□□□□□ -0.73
NPAS3-204ENST00000546849 NUCKS1Q9H1E3 243 aaKnown RBP10.5□□□□□ -0.73
NPAS3-204ENST00000546849 BTLAQ7Z6A9 289 aa10.49□□□□□ -0.73
NPAS3-204ENST00000546849 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
NPAS3-204ENST00000546849 SLC35F4A4IF30 521 aa10.48□□□□□ -0.73
NPAS3-204ENST00000546849 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
NPAS3-204ENST00000546849 RPLP1P05386 114 aaKnown RBP10.48□□□□□ -0.73
NPAS3-204ENST00000546849 ERCC3P19447 782 aa10.48□□□□□ -0.73
NPAS3-204ENST00000546849 USP5P45974 858 aa10.48□□□□□ -0.73
NPAS3-204ENST00000546849 GPR152Q8TDT2 470 aa10.48□□□□□ -0.73
NPAS3-204ENST00000546849 ZBTB39O15060 712 aa10.47□□□□□ -0.73
NPAS3-204ENST00000546849 PPFIA3O75145 1194 aa10.47□□□□□ -0.73
NPAS3-204ENST00000546849 MZF1P28698 734 aaPredicted RBP10.47□□□□□ -0.73
NPAS3-204ENST00000546849 PDE3BQ13370 1112 aa10.47□□□□□ -0.73
NPAS3-204ENST00000546849 RGL4Q8IZJ4 473 aa10.47□□□□□ -0.73
NPAS3-204ENST00000546849 BCS1LQ9Y276 419 aa10.47□□□□□ -0.73
NPAS3-204ENST00000546849 FOXR1Q6PIV2 292 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms