RNA–Protein interactions for RNA: ENST00000546687.1

RPH3A-205, Transcript of rabphilin 3A, humanhuman

TSL 3

Gene RPH3A, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-205ENST00000546687 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
RPH3A-205ENST00000546687 KDM3BQ7LBC6 1761 aa12.77□□□□□ -0.36
RPH3A-205ENST00000546687 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.37
RPH3A-205ENST00000546687 NARFQ9UHQ1 456 aa12.77□□□□□ -0.37
RPH3A-205ENST00000546687 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
RPH3A-205ENST00000546687 CARMIL3Q8ND23 1372 aa12.76□□□□□ -0.37
RPH3A-205ENST00000546687 A1BGP04217 495 aa12.75□□□□□ -0.37
RPH3A-205ENST00000546687 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
RPH3A-205ENST00000546687 CHRNA5P30532 468 aa12.75□□□□□ -0.37
RPH3A-205ENST00000546687 NFIXQ14938 502 aa12.75□□□□□ -0.37
RPH3A-205ENST00000546687 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
RPH3A-205ENST00000546687 PIM2Q9P1W9 311 aa12.75□□□□□ -0.37
RPH3A-205ENST00000546687 ZPR1O75312 459 aa12.74□□□□□ -0.37
RPH3A-205ENST00000546687 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
RPH3A-205ENST00000546687 EIF5P55010 431 aaKnown RBP12.74□□□□□ -0.37
RPH3A-205ENST00000546687 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
RPH3A-205ENST00000546687 HOXB7P09629 217 aa12.73□□□□□ -0.37
RPH3A-205ENST00000546687 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
RPH3A-205ENST00000546687 TSR2Q969E8 191 aaKnown RBP12.73□□□□□ -0.37
RPH3A-205ENST00000546687 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 FANCIQ9NVI1 1328 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 A0A087WZG4 1122 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
RPH3A-205ENST00000546687 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
RPH3A-205ENST00000546687 C9orf131Q5VYM1 1079 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 DUSP27Q5VZP5 1158 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
RPH3A-205ENST00000546687 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 NMRK2Q9NPI5 230 aa12.72□□□□□ -0.37
RPH3A-205ENST00000546687 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
RPH3A-205ENST00000546687 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
RPH3A-205ENST00000546687 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.37
RPH3A-205ENST00000546687 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.37
RPH3A-205ENST00000546687 C8orf58Q8NAV2 365 aa12.71□□□□□ -0.37
RPH3A-205ENST00000546687 ZNF330Q9Y3S2 320 aaPredicted RBP12.71□□□□□ -0.37
RPH3A-205ENST00000546687 NUP98P52948 1817 aa12.71□□□□□ -0.38
RPH3A-205ENST00000546687 SERPINB2P05120 415 aa12.7□□□□□ -0.38
RPH3A-205ENST00000546687 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
RPH3A-205ENST00000546687 E9PSI1 815 aa12.69□□□□□ -0.38
RPH3A-205ENST00000546687 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
RPH3A-205ENST00000546687 TOMM70O94826 608 aa12.69□□□□□ -0.38
RPH3A-205ENST00000546687 MYL6BP14649 208 aa12.69□□□□□ -0.38
RPH3A-205ENST00000546687 PRELPP51888 382 aa12.69□□□□□ -0.38
RPH3A-205ENST00000546687 HNRNPUQ00839 825 aaKnown RBP eCLIP12.69□□□□□ -0.38
RPH3A-205ENST00000546687 PDIA6Q15084 440 aa12.69□□□□□ -0.38
RPH3A-205ENST00000546687 DZIP3Q86Y13 1208 aaKnown RBP12.69□□□□□ -0.38
RPH3A-205ENST00000546687 TSPYL6Q8N831 410 aa12.69□□□□□ -0.38
RPH3A-205ENST00000546687 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
RPH3A-205ENST00000546687 ZC3H4Q9UPT8 1303 aaKnown RBP12.68□□□□□ -0.38
RPH3A-205ENST00000546687 RASSF7Q02833 373 aa12.68□□□□□ -0.38
RPH3A-205ENST00000546687 SLFN5Q08AF3 891 aa12.68□□□□□ -0.38
RPH3A-205ENST00000546687 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
RPH3A-205ENST00000546687 TBC1D9BQ66K14 1250 aa12.68□□□□□ -0.38
RPH3A-205ENST00000546687 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
RPH3A-205ENST00000546687 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
RPH3A-205ENST00000546687 DDX21Q9NR30 783 aaKnown RBP eCLIP12.68□□□□□ -0.38
RPH3A-205ENST00000546687 RNF181Q9P0P0 153 aa12.68□□□□□ -0.38
RPH3A-205ENST00000546687 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
RPH3A-205ENST00000546687 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
RPH3A-205ENST00000546687 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
RPH3A-205ENST00000546687 CHPF2Q9P2E5 772 aa12.67□□□□□ -0.38
RPH3A-205ENST00000546687 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
RPH3A-205ENST00000546687 NFKBIEO00221 500 aa12.66□□□□□ -0.38
RPH3A-205ENST00000546687 RGL2O15211 777 aa12.66□□□□□ -0.38
RPH3A-205ENST00000546687 APLP1P51693 650 aa12.66□□□□□ -0.38
RPH3A-205ENST00000546687 PROSER3Q2NL68 480 aa12.66□□□□□ -0.38
RPH3A-205ENST00000546687 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
RPH3A-205ENST00000546687 PRR5LQ6MZQ0 368 aa12.66□□□□□ -0.38
RPH3A-205ENST00000546687 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
RPH3A-205ENST00000546687 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
RPH3A-205ENST00000546687 KDM2BQ8NHM5 1336 aa12.65□□□□□ -0.38
RPH3A-205ENST00000546687 ANXA1P04083 346 aa12.65□□□□□ -0.38
RPH3A-205ENST00000546687 BICDL1Q6ZP65 573 aa12.65□□□□□ -0.38
RPH3A-205ENST00000546687 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.38
RPH3A-205ENST00000546687 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
RPH3A-205ENST00000546687 TTLL6Q8N841 843 aa12.65□□□□□ -0.38
RPH3A-205ENST00000546687 HYPKQ9NX55 129 aa12.65□□□□□ -0.38
RPH3A-205ENST00000546687 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 VAMP4O75379 141 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 CLEC4GQ6UXB4 293 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 BRIP1Q9BX63 1249 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 ZNF652Q9Y2D9 606 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 PCNTO95613 3336 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 ANKRD36CQ5JPF3 1778 aa12.64□□□□□ -0.39
RPH3A-205ENST00000546687 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
RPH3A-205ENST00000546687 MAP3K15Q6ZN16 1313 aa12.63□□□□□ -0.39
RPH3A-205ENST00000546687 H0YIN7 160 aa12.63□□□□□ -0.39
RPH3A-205ENST00000546687 LMNB1P20700 586 aa12.63□□□□□ -0.39
RPH3A-205ENST00000546687 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
RPH3A-205ENST00000546687 XAGE3Q8WTP9 111 aa12.63□□□□□ -0.39
RPH3A-205ENST00000546687 SCN4AP35499 1836 aa12.62□□□□□ -0.39
RPH3A-205ENST00000546687 FSTL1Q12841 308 aa12.62□□□□□ -0.39
RPH3A-205ENST00000546687 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
RPH3A-205ENST00000546687 HLFQ16534 295 aa12.62□□□□□ -0.39
RPH3A-205ENST00000546687 STK31Q9BXU1 1019 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms