RNA–Protein interactions for RNA: ENST00000546519.1

SLC38A1-203, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-203ENST00000546519 USP42Q9H9J4 1324 aaKnown RBP28.8■■■□□ 2.2
SLC38A1-203ENST00000546519 RBM46Q8TBY0 533 aaKnown RBP28.8■■■□□ 2.2
SLC38A1-203ENST00000546519 ZNF496Q96IT1 587 aaPredicted RBP28.8■■■□□ 2.2
SLC38A1-203ENST00000546519 CHMP4AQ9BY43 222 aa28.8■■■□□ 2.2
SLC38A1-203ENST00000546519 SBF1O95248 1867 aa28.79■■■□□ 2.2
SLC38A1-203ENST00000546519 DALRD3Q5D0E6 543 aaKnown RBP28.79■■■□□ 2.2
SLC38A1-203ENST00000546519 RNF181Q9P0P0 153 aa28.79■■■□□ 2.2
SLC38A1-203ENST00000546519 VAMP4O75379 141 aa28.78■■■□□ 2.2
SLC38A1-203ENST00000546519 C16orf71Q8IYS4 520 aaPredicted RBP28.78■■■□□ 2.2
SLC38A1-203ENST00000546519 TSPYL6Q8N831 410 aa28.78■■■□□ 2.2
SLC38A1-203ENST00000546519 KRT24Q2M2I5 525 aa28.77■■■□□ 2.2
SLC38A1-203ENST00000546519 VSIG10Q8N0Z9 540 aa28.77■■■□□ 2.2
SLC38A1-203ENST00000546519 LAMB4A4D0S4 1761 aa28.77■■■□□ 2.2
SLC38A1-203ENST00000546519 SNRPA1P09661 255 aaKnown RBP28.76■■■□□ 2.19
SLC38A1-203ENST00000546519 INTS5Q6P9B9 1019 aaKnown RBP28.75■■■□□ 2.19
SLC38A1-203ENST00000546519 RRAGCQ9HB90 399 aa28.75■■■□□ 2.19
SLC38A1-203ENST00000546519 RCAN3Q9UKA8 241 aa28.75■■■□□ 2.19
SLC38A1-203ENST00000546519 TNRC6CQ9HCJ0 1690 aaKnown RBP28.74■■■□□ 2.19
SLC38A1-203ENST00000546519 POLRMTO00411 1230 aaKnown RBP28.74■■■□□ 2.19
SLC38A1-203ENST00000546519 AFDNP55196 1824 aaKnown RBP28.73■■■□□ 2.19
SLC38A1-203ENST00000546519 ELL2O00472 640 aaPredicted RBP28.73■■■□□ 2.19
SLC38A1-203ENST00000546519 ALDH1L2Q3SY69 923 aa28.73■■■□□ 2.19
SLC38A1-203ENST00000546519 KDM2BQ8NHM5 1336 aa28.72■■■□□ 2.19
SLC38A1-203ENST00000546519 KLRG1Q96E93 195 aa28.72■■■□□ 2.19
SLC38A1-203ENST00000546519 TEX13AQ9BXU3 409 aaPredicted RBP28.72■■■□□ 2.19
SLC38A1-203ENST00000546519 CACNA1FO60840 1977 aa28.71■■■□□ 2.19
SLC38A1-203ENST00000546519 TM4SF1P30408 202 aa28.71■■■□□ 2.19
SLC38A1-203ENST00000546519 RARSP54136 660 aaKnown RBP28.71■■■□□ 2.19
SLC38A1-203ENST00000546519 USPL1Q5W0Q7 1092 aa28.71■■■□□ 2.19
SLC38A1-203ENST00000546519 DNAJC10Q8IXB1 793 aa28.71■■■□□ 2.19
SLC38A1-203ENST00000546519 RASSF7Q02833 373 aa28.7■■■□□ 2.18
SLC38A1-203ENST00000546519 FSTL1Q12841 308 aa28.69■■■□□ 2.18
SLC38A1-203ENST00000546519 CCDC30Q5VVM6 783 aa28.69■■■□□ 2.18
SLC38A1-203ENST00000546519 HDGFL1Q5TGJ6 251 aa28.68■■■□□ 2.18
SLC38A1-203ENST00000546519 BRPF1P55201 1214 aaPredicted RBP28.67■■■□□ 2.18
SLC38A1-203ENST00000546519 COL13A1Q5TAT6 717 aaPredicted RBP28.67■■■□□ 2.18
SLC38A1-203ENST00000546519 DLEC1Q9Y238 1755 aa28.66■■■□□ 2.18
SLC38A1-203ENST00000546519 ZPR1O75312 459 aa28.66■■■□□ 2.18
SLC38A1-203ENST00000546519 SSH1Q8WYL5 1049 aa28.66■■■□□ 2.18
SLC38A1-203ENST00000546519 ERBB4Q15303 1308 aa28.66■■■□□ 2.18
SLC38A1-203ENST00000546519 NRXN2Q9P2S2 1712 aa28.66■■■□□ 2.18
SLC38A1-203ENST00000546519 JMYQ8N9B5 988 aa28.65■■■□□ 2.18
SLC38A1-203ENST00000546519 PRAMEF22A3QJZ6 481 aa28.64■■■□□ 2.18
SLC38A1-203ENST00000546519 PRELPP51888 382 aa28.64■■■□□ 2.18
SLC38A1-203ENST00000546519 STK31Q9BXU1 1019 aa28.64■■■□□ 2.18
SLC38A1-203ENST00000546519 CCDC88AQ3V6T2 1871 aa28.63■■■□□ 2.17
SLC38A1-203ENST00000546519 NFIXQ14938 502 aa28.63■■■□□ 2.17
SLC38A1-203ENST00000546519 SMC4Q9NTJ3 1288 aa28.63■■■□□ 2.17
SLC38A1-203ENST00000546519 USP16Q9Y5T5 823 aa28.63■■■□□ 2.17
SLC38A1-203ENST00000546519 TIAM2Q8IVF5 1701 aa28.63■■■□□ 2.17
SLC38A1-203ENST00000546519 STARD3NLO95772 234 aa28.62■■■□□ 2.17
SLC38A1-203ENST00000546519 CYP19A1P11511 503 aaPredicted RBP28.62■■■□□ 2.17
SLC38A1-203ENST00000546519 EIF2S2P20042 333 aaKnown RBP28.62■■■□□ 2.17
SLC38A1-203ENST00000546519 COL15A1P39059 1388 aa28.62■■■□□ 2.17
SLC38A1-203ENST00000546519 DBF4Q9UBU7 674 aaPredicted RBP28.61■■■□□ 2.17
SLC38A1-203ENST00000546519 ZBTB1Q9Y2K1 713 aa28.61■■■□□ 2.17
SLC38A1-203ENST00000546519 MRPL50Q8N5N7 158 aaKnown RBP28.6■■■□□ 2.17
SLC38A1-203ENST00000546519 BCL2L12Q9HB09 334 aa28.6■■■□□ 2.17
SLC38A1-203ENST00000546519 RNF123Q5XPI4 1314 aa28.6■■■□□ 2.17
SLC38A1-203ENST00000546519 KIF16BQ96L93 1317 aa28.6■■■□□ 2.17
SLC38A1-203ENST00000546519 BCAR3O75815 825 aa28.59■■■□□ 2.17
SLC38A1-203ENST00000546519 SMC1BQ8NDV3 1235 aa28.59■■■□□ 2.17
SLC38A1-203ENST00000546519 NARFQ9UHQ1 456 aa28.59■■■□□ 2.17
SLC38A1-203ENST00000546519 CARMIL3Q8ND23 1372 aa28.59■■■□□ 2.17
SLC38A1-203ENST00000546519 CAPN15O75808 1086 aa28.58■■■□□ 2.17
SLC38A1-203ENST00000546519 DDX21Q9NR30 783 aaKnown RBP eCLIP28.58■■■□□ 2.17
SLC38A1-203ENST00000546519 SERPINB2P05120 415 aa28.57■■■□□ 2.16
SLC38A1-203ENST00000546519 BCL2L13Q9BXK5 485 aa28.57■■■□□ 2.16
SLC38A1-203ENST00000546519 CHPF2Q9P2E5 772 aa28.57■■■□□ 2.16
SLC38A1-203ENST00000546519 SLC4A2P04920 1241 aa28.56■■■□□ 2.16
SLC38A1-203ENST00000546519 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.56■■■□□ 2.16
SLC38A1-203ENST00000546519 NECTIN2Q92692 538 aa28.56■■■□□ 2.16
SLC38A1-203ENST00000546519 HYPKQ9NX55 129 aa28.56■■■□□ 2.16
SLC38A1-203ENST00000546519 LMNB1P20700 586 aa28.55■■■□□ 2.16
SLC38A1-203ENST00000546519 PDIA6Q15084 440 aa28.55■■■□□ 2.16
SLC38A1-203ENST00000546519 TCERG1O14776 1098 aaKnown RBP28.54■■■□□ 2.16
SLC38A1-203ENST00000546519 C2CD5Q86YS7 1000 aa28.54■■■□□ 2.16
SLC38A1-203ENST00000546519 SUPT16HQ9Y5B9 1047 aaKnown RBP28.54■■■□□ 2.16
SLC38A1-203ENST00000546519 ANKRD31Q8N7Z5 1873 aa28.53■■■□□ 2.16
SLC38A1-203ENST00000546519 GLTPD2A6NH11 291 aa28.53■■■□□ 2.16
SLC38A1-203ENST00000546519 CANXP27824 592 aaKnown RBP28.53■■■□□ 2.16
SLC38A1-203ENST00000546519 RRP1P56182 461 aaKnown RBP28.53■■■□□ 2.16
SLC38A1-203ENST00000546519 TTLL6Q8N841 843 aa28.53■■■□□ 2.16
SLC38A1-203ENST00000546519 ARHGAP45Q92619 1136 aa28.53■■■□□ 2.16
SLC38A1-203ENST00000546519 PTPRCP08575 1304 aa28.52■■■□□ 2.16
SLC38A1-203ENST00000546519 ZC3H4Q9UPT8 1303 aaKnown RBP28.52■■■□□ 2.16
SLC38A1-203ENST00000546519 NFKBIEO00221 500 aa28.52■■■□□ 2.16
SLC38A1-203ENST00000546519 IPO8O15397 1037 aaKnown RBP28.52■■■□□ 2.16
SLC38A1-203ENST00000546519 BICDL1Q6ZP65 573 aa28.52■■■□□ 2.16
SLC38A1-203ENST00000546519 COL11A2P13942 1736 aaPredicted RBP28.5■■■□□ 2.15
SLC38A1-203ENST00000546519 NBPF26B4DH59 902 aa28.5■■■□□ 2.15
SLC38A1-203ENST00000546519 A1BGP04217 495 aa28.5■■■□□ 2.15
SLC38A1-203ENST00000546519 VEGFAP15692 232 aaPredicted RBP28.5■■■□□ 2.15
SLC38A1-203ENST00000546519 NBPF10Q6P3W6 841 aaKnown RBP28.5■■■□□ 2.15
SLC38A1-203ENST00000546519 LRP10Q7Z4F1 713 aa28.5■■■□□ 2.15
SLC38A1-203ENST00000546519 NBPF15Q8N660 670 aa28.5■■■□□ 2.15
SLC38A1-203ENST00000546519 PCNTO95613 3336 aa28.49■■■□□ 2.15
SLC38A1-203ENST00000546519 FLIIQ13045 1269 aa28.49■■■□□ 2.15
SLC38A1-203ENST00000546519 PROSER3Q2NL68 480 aa28.49■■■□□ 2.15
SLC38A1-203ENST00000546519 ZKSCAN2Q63HK3 967 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms