RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 NIP7Q9Y221 180 aaKnown RBP eCLIP26.13■■□□□ 1.77
CHD4-213ENST00000545584 ANKRD31Q8N7Z5 1873 aa26.13■■□□□ 1.77
CHD4-213ENST00000545584 TPTE2Q6XPS3 522 aa26.11■■□□□ 1.77
CHD4-213ENST00000545584 NGEFQ8N5V2 710 aa26.11■■□□□ 1.77
CHD4-213ENST00000545584 RRP7AQ9Y3A4 280 aaKnown RBP26.11■■□□□ 1.77
CHD4-213ENST00000545584 RASSF7Q02833 373 aa26.1■■□□□ 1.77
CHD4-213ENST00000545584 CCDC146Q8IYE0 955 aa26.1■■□□□ 1.77
CHD4-213ENST00000545584 CNKSR1Q969H4 720 aa26.1■■□□□ 1.77
CHD4-213ENST00000545584 BABAM1Q9NWV8 329 aa26.1■■□□□ 1.77
CHD4-213ENST00000545584 KDM2BQ8NHM5 1336 aa26.1■■□□□ 1.77
CHD4-213ENST00000545584 LMNB1P20700 586 aa26.09■■□□□ 1.77
CHD4-213ENST00000545584 KIF6Q6ZMV9 814 aa26.09■■□□□ 1.77
CHD4-213ENST00000545584 RUNDC1Q96C34 613 aa26.09■■□□□ 1.77
CHD4-213ENST00000545584 NEUROD2Q15784 382 aa26.08■■□□□ 1.77
CHD4-213ENST00000545584 STYK1Q6J9G0 422 aa26.08■■□□□ 1.77
CHD4-213ENST00000545584 MASTLQ96GX5 879 aa26.08■■□□□ 1.77
CHD4-213ENST00000545584 PRKRIP1Q9H875 184 aaPredicted RBP26.08■■□□□ 1.77
CHD4-213ENST00000545584 SBF1O95248 1867 aa26.08■■□□□ 1.77
CHD4-213ENST00000545584 ERVV-1B6SEH8 477 aa26.07■■□□□ 1.76
CHD4-213ENST00000545584 SRGNP10124 158 aa26.07■■□□□ 1.76
CHD4-213ENST00000545584 MYL6BP14649 208 aa26.07■■□□□ 1.76
CHD4-213ENST00000545584 HLFQ16534 295 aa26.07■■□□□ 1.76
CHD4-213ENST00000545584 NMRK2Q9NPI5 230 aa26.07■■□□□ 1.76
CHD4-213ENST00000545584 ERBB4Q15303 1308 aa26.07■■□□□ 1.76
CHD4-213ENST00000545584 ZC3H4Q9UPT8 1303 aaKnown RBP26.07■■□□□ 1.76
CHD4-213ENST00000545584 C21orf2O43822 256 aa26.06■■□□□ 1.76
CHD4-213ENST00000545584 GTF2E1P29083 439 aaPredicted RBP26.06■■□□□ 1.76
CHD4-213ENST00000545584 ZNF219Q9P2Y4 722 aaPredicted RBP26.06■■□□□ 1.76
CHD4-213ENST00000545584 COL11A2P13942 1736 aaPredicted RBP26.05■■□□□ 1.76
CHD4-213ENST00000545584 FAM177BA6PVY3 158 aa26.05■■□□□ 1.76
CHD4-213ENST00000545584 TOMM70O94826 608 aa26.05■■□□□ 1.76
CHD4-213ENST00000545584 MAP3K15Q6ZN16 1313 aa26.05■■□□□ 1.76
CHD4-213ENST00000545584 HSPA6P17066 643 aa26.04■■□□□ 1.76
CHD4-213ENST00000545584 C16orf71Q8IYS4 520 aaPredicted RBP26.04■■□□□ 1.76
CHD4-213ENST00000545584 ADAMTS8Q9UP79 889 aa26.04■■□□□ 1.76
CHD4-213ENST00000545584 EIF2S2P20042 333 aaKnown RBP26.03■■□□□ 1.76
CHD4-213ENST00000545584 SOGA3Q5TF21 947 aa26.03■■□□□ 1.76
CHD4-213ENST00000545584 NYXQ9GZU5 481 aa26.03■■□□□ 1.76
CHD4-213ENST00000545584 NFKBIEO00221 500 aa26.02■■□□□ 1.76
CHD4-213ENST00000545584 ZEB1P37275 1124 aaPredicted RBP26.02■■□□□ 1.76
CHD4-213ENST00000545584 PRPF40BQ6NWY9 871 aaKnown RBP26.02■■□□□ 1.76
CHD4-213ENST00000545584 TTLL7Q6ZT98 887 aa26.02■■□□□ 1.76
CHD4-213ENST00000545584 NPR1P16066 1061 aa26.01■■□□□ 1.75
CHD4-213ENST00000545584 ZBTB3Q9H5J0 574 aa26.01■■□□□ 1.75
CHD4-213ENST00000545584 LAS1LQ9Y4W2 734 aaKnown RBP26■■□□□ 1.75
CHD4-213ENST00000545584 PRELPP51888 382 aa25.99■■□□□ 1.75
CHD4-213ENST00000545584 TAOK3Q9H2K8 898 aa25.99■■□□□ 1.75
CHD4-213ENST00000545584 KLRG2A4D1S0 409 aaPredicted RBP25.98■■□□□ 1.75
CHD4-213ENST00000545584 RRAGCQ9HB90 399 aa25.98■■□□□ 1.75
CHD4-213ENST00000545584 TRIM35Q9UPQ4 493 aa25.98■■□□□ 1.75
CHD4-213ENST00000545584 NUP98P52948 1817 aa25.98■■□□□ 1.75
CHD4-213ENST00000545584 CHL1O00533 1208 aa25.97■■□□□ 1.75
CHD4-213ENST00000545584 GPTP24298 496 aa25.97■■□□□ 1.75
CHD4-213ENST00000545584 CCDC88AQ3V6T2 1871 aa25.97■■□□□ 1.75
CHD4-213ENST00000545584 SLX4Q8IY92 1834 aa25.97■■□□□ 1.75
CHD4-213ENST00000545584 CACNA1SQ13698 1873 aa25.96■■□□□ 1.75
CHD4-213ENST00000545584 LTBP3Q9NS15 1303 aa25.96■■□□□ 1.75
CHD4-213ENST00000545584 GLTPD2A6NH11 291 aa25.96■■□□□ 1.75
CHD4-213ENST00000545584 ERFEQ4G0M1 354 aa25.96■■□□□ 1.75
CHD4-213ENST00000545584 GIGYF2Q6Y7W6 1299 aaKnown RBP25.96■■□□□ 1.75
CHD4-213ENST00000545584 RBM46Q8TBY0 533 aaKnown RBP25.96■■□□□ 1.75
CHD4-213ENST00000545584 ARFGEF2Q9Y6D5 1785 aa25.95■■□□□ 1.75
CHD4-213ENST00000545584 ALDH1B1P30837 517 aa25.95■■□□□ 1.74
CHD4-213ENST00000545584 DPY19L2Q6NUT2 758 aa25.95■■□□□ 1.74
CHD4-213ENST00000545584 NUTM1Q86Y26 1132 aa25.95■■□□□ 1.74
CHD4-213ENST00000545584 FER1L6Q2WGJ9 1857 aa25.95■■□□□ 1.74
CHD4-213ENST00000545584 TNRC6CQ9HCJ0 1690 aaKnown RBP25.94■■□□□ 1.74
CHD4-213ENST00000545584 PDIA6Q15084 440 aa25.94■■□□□ 1.74
CHD4-213ENST00000545584 CCDC93Q567U6 631 aa25.94■■□□□ 1.74
CHD4-213ENST00000545584 IBTKQ9P2D0 1353 aaPredicted RBP25.94■■□□□ 1.74
CHD4-213ENST00000545584 PPP1R42Q7Z4L9 355 aa25.93■■□□□ 1.74
CHD4-213ENST00000545584 ZNF34Q8IZ26 560 aa25.93■■□□□ 1.74
CHD4-213ENST00000545584 NECTIN2Q92692 538 aa25.93■■□□□ 1.74
CHD4-213ENST00000545584 TIAM2Q8IVF5 1701 aa25.92■■□□□ 1.74
CHD4-213ENST00000545584 ANXA1P04083 346 aa25.92■■□□□ 1.74
CHD4-213ENST00000545584 PARP10Q53GL7 1025 aa25.92■■□□□ 1.74
CHD4-213ENST00000545584 SUSD4Q5VX71 490 aa25.92■■□□□ 1.74
CHD4-213ENST00000545584 LRP10Q7Z4F1 713 aa25.92■■□□□ 1.74
CHD4-213ENST00000545584 UBN2Q6ZU65 1347 aa25.91■■□□□ 1.74
CHD4-213ENST00000545584 VEGFAP15692 232 aaPredicted RBP25.91■■□□□ 1.74
CHD4-213ENST00000545584 APLP1P51693 650 aa25.91■■□□□ 1.74
CHD4-213ENST00000545584 PROSER3Q2NL68 480 aa25.91■■□□□ 1.74
CHD4-213ENST00000545584 C7orf43Q8WVR3 580 aa25.91■■□□□ 1.74
CHD4-213ENST00000545584 ABCC12Q96J65 1359 aa25.91■■□□□ 1.74
CHD4-213ENST00000545584 FSTL1Q12841 308 aa25.9■■□□□ 1.74
CHD4-213ENST00000545584 RPGRQ92834 1020 aaKnown RBP25.9■■□□□ 1.74
CHD4-213ENST00000545584 CFAP44Q96MT7 982 aa25.9■■□□□ 1.74
CHD4-213ENST00000545584 DDX21Q9NR30 783 aaKnown RBP eCLIP25.9■■□□□ 1.74
CHD4-213ENST00000545584 AIMP1Q12904 312 aaKnown RBP25.89■■□□□ 1.74
CHD4-213ENST00000545584 KRT24Q2M2I5 525 aa25.89■■□□□ 1.74
CHD4-213ENST00000545584 CRY2Q49AN0 593 aa25.89■■□□□ 1.74
CHD4-213ENST00000545584 HSP90AB3PQ58FF7 597 aa25.89■■□□□ 1.74
CHD4-213ENST00000545584 COPS6Q7L5N1 327 aa25.89■■□□□ 1.74
CHD4-213ENST00000545584 RTKN2Q8IZC4 609 aa25.89■■□□□ 1.74
CHD4-213ENST00000545584 DICER1Q9UPY3 1922 aaKnown RBP25.88■■□□□ 1.73
CHD4-213ENST00000545584 APAF1O14727 1248 aa25.88■■□□□ 1.73
CHD4-213ENST00000545584 HOXB7P09629 217 aa25.88■■□□□ 1.73
CHD4-213ENST00000545584 CALD1Q05682 793 aaKnown RBP25.88■■□□□ 1.73
CHD4-213ENST00000545584 XAGE3Q8WTP9 111 aa25.88■■□□□ 1.73
CHD4-213ENST00000545584 NTSR2O95665 410 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms