RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 TMC1Q8TDI8 760 aa10.54□□□□□ -0.72
SMCO2-206ENST00000543991 IFT43Q96FT9 208 aa10.54□□□□□ -0.72
SMCO2-206ENST00000543991 KLK14Q9P0G3 267 aa10.54□□□□□ -0.72
SMCO2-206ENST00000543991 CAPN5O15484 640 aaPredicted RBP10.53□□□□□ -0.72
SMCO2-206ENST00000543991 TREHO43280 583 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 UPP2O95045 317 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 TXLNAP40222 546 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 PLA2G4AP47712 749 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 C4orf17Q53FE4 359 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 ATCAYQ86WG3 371 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 ETFBKMTQ8IXQ9 262 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 DMRTB1Q96MA1 342 aa10.53□□□□□ -0.72
SMCO2-206ENST00000543991 TAGLNQ01995 201 aaKnown RBP10.52□□□□□ -0.73
SMCO2-206ENST00000543991 PDE3BQ13370 1112 aa10.52□□□□□ -0.73
SMCO2-206ENST00000543991 FAM129BQ96TA1 746 aa10.52□□□□□ -0.73
SMCO2-206ENST00000543991 POLMQ9NP87 494 aaPredicted RBP10.52□□□□□ -0.73
SMCO2-206ENST00000543991 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
SMCO2-206ENST00000543991 P4HBP07237 508 aaKnown RBP10.51□□□□□ -0.73
SMCO2-206ENST00000543991 MZF1P28698 734 aaPredicted RBP10.51□□□□□ -0.73
SMCO2-206ENST00000543991 FMR1Q06787 632 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMCO2-206ENST00000543991 IGHA2P01877 340 aa10.5□□□□□ -0.73
SMCO2-206ENST00000543991 CTSOP43234 321 aaPredicted RBP10.5□□□□□ -0.73
SMCO2-206ENST00000543991 ZAP70P43403 619 aa10.5□□□□□ -0.73
SMCO2-206ENST00000543991 USP5P45974 858 aa10.5□□□□□ -0.73
SMCO2-206ENST00000543991 PLCB3Q01970 1234 aa10.5□□□□□ -0.73
SMCO2-206ENST00000543991 DSC3Q14574 896 aa10.5□□□□□ -0.73
SMCO2-206ENST00000543991 NBPF1Q3BBV0 1214 aa10.5□□□□□ -0.73
SMCO2-206ENST00000543991 ZDHHC3Q9NYG2 299 aa10.5□□□□□ -0.73
SMCO2-206ENST00000543991 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
SMCO2-206ENST00000543991 VAMP1P23763 118 aa10.49□□□□□ -0.73
SMCO2-206ENST00000543991 HIF1AQ16665 826 aa10.49□□□□□ -0.73
SMCO2-206ENST00000543991 GJD3Q8N144 294 aa10.49□□□□□ -0.73
SMCO2-206ENST00000543991 RHPN1Q8TCX5 695 aa10.49□□□□□ -0.73
SMCO2-206ENST00000543991 C7orf43Q8WVR3 580 aa10.49□□□□□ -0.73
SMCO2-206ENST00000543991 AIDAQ96BJ3 306 aa10.49□□□□□ -0.73
SMCO2-206ENST00000543991 BCL11AQ9H165 835 aa10.49□□□□□ -0.73
SMCO2-206ENST00000543991 IGSF5Q9NSI5 407 aa10.49□□□□□ -0.73
SMCO2-206ENST00000543991 SMARCA2P51531 1590 aa10.48□□□□□ -0.73
SMCO2-206ENST00000543991 DNM1Q05193 864 aaKnown RBP10.48□□□□□ -0.73
SMCO2-206ENST00000543991 TREML1Q86YW5 311 aa10.48□□□□□ -0.73
SMCO2-206ENST00000543991 EDEM1Q92611 657 aa10.48□□□□□ -0.73
SMCO2-206ENST00000543991 ALKBH8Q96BT7 664 aaKnown RBP10.48□□□□□ -0.73
SMCO2-206ENST00000543991 GPC6Q9Y625 555 aaPredicted RBP10.48□□□□□ -0.73
SMCO2-206ENST00000543991 PDGFAP04085 211 aa10.47□□□□□ -0.73
SMCO2-206ENST00000543991 BMP2P12643 396 aa10.47□□□□□ -0.73
SMCO2-206ENST00000543991 PHKA2P46019 1235 aa10.47□□□□□ -0.73
SMCO2-206ENST00000543991 EHHADHQ08426 723 aa10.47□□□□□ -0.73
SMCO2-206ENST00000543991 WDR44Q5JSH3 913 aa10.47□□□□□ -0.73
SMCO2-206ENST00000543991 BCS1LQ9Y276 419 aa10.47□□□□□ -0.73
SMCO2-206ENST00000543991 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
SMCO2-206ENST00000543991 ATAD2BQ9ULI0 1458 aa10.47□□□□□ -0.73
SMCO2-206ENST00000543991 BAZ1AQ9NRL2 1556 aaPredicted RBP10.47□□□□□ -0.73
SMCO2-206ENST00000543991 GPR182O15218 404 aa10.46□□□□□ -0.73
SMCO2-206ENST00000543991 PCSK2P16519 638 aa10.46□□□□□ -0.73
SMCO2-206ENST00000543991 TATP17735 454 aaPredicted RBP10.46□□□□□ -0.73
SMCO2-206ENST00000543991 FGD1P98174 961 aa10.46□□□□□ -0.73
SMCO2-206ENST00000543991 POU4F2Q12837 409 aa10.46□□□□□ -0.73
SMCO2-206ENST00000543991 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.73
SMCO2-206ENST00000543991 RNF217Q8TC41 542 aa10.46□□□□□ -0.73
SMCO2-206ENST00000543991 FAM13BQ9NYF5 915 aa10.46□□□□□ -0.73
SMCO2-206ENST00000543991 LAMC3Q9Y6N6 1575 aa10.45□□□□□ -0.74
SMCO2-206ENST00000543991 HMGXB3Q12766 1538 aa10.45□□□□□ -0.74
SMCO2-206ENST00000543991 TGFBR3LH3BV60 316 aa10.45□□□□□ -0.74
SMCO2-206ENST00000543991 MICAL2O94851 1124 aa10.45□□□□□ -0.74
SMCO2-206ENST00000543991 C6orf118Q5T5N4 469 aa10.45□□□□□ -0.74
SMCO2-206ENST00000543991 MRPL14Q6P1L8 145 aaKnown RBP10.45□□□□□ -0.74
SMCO2-206ENST00000543991 LYSMD3Q7Z3D4 306 aa10.45□□□□□ -0.74
SMCO2-206ENST00000543991 PRICKLE2Q7Z3G6 844 aa10.45□□□□□ -0.74
SMCO2-206ENST00000543991 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
SMCO2-206ENST00000543991 MAPK8P45983 427 aa10.44□□□□□ -0.74
SMCO2-206ENST00000543991 GPR152Q8TDT2 470 aa10.44□□□□□ -0.74
SMCO2-206ENST00000543991 SUSD3Q96L08 255 aa10.44□□□□□ -0.74
SMCO2-206ENST00000543991 RGS20O76081 388 aa10.43□□□□□ -0.74
SMCO2-206ENST00000543991 LDHBP07195 334 aaKnown RBP10.43□□□□□ -0.74
SMCO2-206ENST00000543991 IER5Q5VY09 327 aa10.43□□□□□ -0.74
SMCO2-206ENST00000543991 NIF3L1Q9GZT8 377 aa10.43□□□□□ -0.74
SMCO2-206ENST00000543991 ANKIB1Q9P2G1 1089 aa10.43□□□□□ -0.74
SMCO2-206ENST00000543991 PRPF40AO75400 957 aaKnown RBP10.42□□□□□ -0.74
SMCO2-206ENST00000543991 RPLP1P05386 114 aaKnown RBP10.42□□□□□ -0.74
SMCO2-206ENST00000543991 BICDL1Q6ZP65 573 aa10.42□□□□□ -0.74
SMCO2-206ENST00000543991 NUDT16Q96DE0 195 aaKnown RBP10.42□□□□□ -0.74
SMCO2-206ENST00000543991 DMGDHQ9UI17 866 aaKnown RBP10.42□□□□□ -0.74
SMCO2-206ENST00000543991 AVPP01185 164 aa10.41□□□□□ -0.74
SMCO2-206ENST00000543991 ATP4AP20648 1035 aa10.41□□□□□ -0.74
SMCO2-206ENST00000543991 SCARF1Q14162 830 aa10.41□□□□□ -0.74
SMCO2-206ENST00000543991 ZNF280CQ8ND82 737 aa10.41□□□□□ -0.74
SMCO2-206ENST00000543991 TTC16Q8NEE8 873 aa10.41□□□□□ -0.74
SMCO2-206ENST00000543991 PIK3R5Q8WYR1 880 aa10.41□□□□□ -0.74
SMCO2-206ENST00000543991 A0A1B0GTH6 734 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 FAM187AA6NFU0 413 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 TTLL8A6PVC2 850 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 OPLAHO14841 1288 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 ATP2B2Q01814 1243 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 ENOX2Q16206 610 aaKnown RBP10.4□□□□□ -0.74
SMCO2-206ENST00000543991 KLRG1Q96E93 195 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 HSH2DQ96JZ2 352 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 ZIC5Q96T25 663 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 NEUROD4Q9HD90 331 aa10.4□□□□□ -0.74
SMCO2-206ENST00000543991 TIMMDC1Q9NPL8 285 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms