RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 RRP7AQ9Y3A4 280 aaKnown RBP28.19■■■□□ 2.1
PSME3-204ENST00000543428 ANKRD31Q8N7Z5 1873 aa28.19■■■□□ 2.1
PSME3-204ENST00000543428 PRKRIP1Q9H875 184 aaPredicted RBP28.18■■■□□ 2.1
PSME3-204ENST00000543428 RNF181Q9P0P0 153 aa28.18■■■□□ 2.1
PSME3-204ENST00000543428 ZEB1P37275 1124 aaPredicted RBP28.17■■■□□ 2.1
PSME3-204ENST00000543428 RUNDC1Q96C34 613 aa28.17■■■□□ 2.1
PSME3-204ENST00000543428 RGL2O15211 777 aa28.16■■■□□ 2.1
PSME3-204ENST00000543428 NIP7Q9Y221 180 aaKnown RBP eCLIP28.16■■■□□ 2.1
PSME3-204ENST00000543428 MYL6BP14649 208 aa28.14■■■□□ 2.1
PSME3-204ENST00000543428 KIF6Q6ZMV9 814 aa28.14■■■□□ 2.1
PSME3-204ENST00000543428 BABAM1Q9NWV8 329 aa28.14■■■□□ 2.1
PSME3-204ENST00000543428 ADAMTS8Q9UP79 889 aa28.14■■■□□ 2.1
PSME3-204ENST00000543428 TPTE2Q6XPS3 522 aa28.13■■■□□ 2.09
PSME3-204ENST00000543428 FAM177BA6PVY3 158 aa28.12■■■□□ 2.09
PSME3-204ENST00000543428 RASSF7Q02833 373 aa28.12■■■□□ 2.09
PSME3-204ENST00000543428 HLFQ16534 295 aa28.12■■■□□ 2.09
PSME3-204ENST00000543428 COL11A2P13942 1736 aaPredicted RBP28.12■■■□□ 2.09
PSME3-204ENST00000543428 SBF1O95248 1867 aa28.11■■■□□ 2.09
PSME3-204ENST00000543428 ZNF219Q9P2Y4 722 aaPredicted RBP28.11■■■□□ 2.09
PSME3-204ENST00000543428 EIF2S2P20042 333 aaKnown RBP28.1■■■□□ 2.09
PSME3-204ENST00000543428 GTF2E1P29083 439 aaPredicted RBP28.1■■■□□ 2.09
PSME3-204ENST00000543428 CNKSR1Q969H4 720 aa28.1■■■□□ 2.09
PSME3-204ENST00000543428 ERVV-1B6SEH8 477 aa28.09■■■□□ 2.09
PSME3-204ENST00000543428 KIF3CO14782 793 aa28.09■■■□□ 2.09
PSME3-204ENST00000543428 C21orf2O43822 256 aa28.09■■■□□ 2.09
PSME3-204ENST00000543428 LMNB1P20700 586 aa28.09■■■□□ 2.09
PSME3-204ENST00000543428 STYK1Q6J9G0 422 aa28.09■■■□□ 2.09
PSME3-204ENST00000543428 LAS1LQ9Y4W2 734 aaKnown RBP28.09■■■□□ 2.09
PSME3-204ENST00000543428 ERBB4Q15303 1308 aa28.09■■■□□ 2.09
PSME3-204ENST00000543428 MAP3K15Q6ZN16 1313 aa28.09■■■□□ 2.09
PSME3-204ENST00000543428 SRGNP10124 158 aa28.08■■■□□ 2.09
PSME3-204ENST00000543428 TTLL7Q6ZT98 887 aa28.08■■■□□ 2.09
PSME3-204ENST00000543428 MASTLQ96GX5 879 aa28.08■■■□□ 2.09
PSME3-204ENST00000543428 KDM2BQ8NHM5 1336 aa28.08■■■□□ 2.09
PSME3-204ENST00000543428 ZBTB3Q9H5J0 574 aa28.07■■■□□ 2.08
PSME3-204ENST00000543428 NMRK2Q9NPI5 230 aa28.07■■■□□ 2.08
PSME3-204ENST00000543428 TRIM35Q9UPQ4 493 aa28.06■■■□□ 2.08
PSME3-204ENST00000543428 NUP98P52948 1817 aa28.05■■■□□ 2.08
PSME3-204ENST00000543428 CACNA1SQ13698 1873 aa28.05■■■□□ 2.08
PSME3-204ENST00000543428 NYXQ9GZU5 481 aa28.05■■■□□ 2.08
PSME3-204ENST00000543428 PRPF40BQ6NWY9 871 aaKnown RBP28.04■■■□□ 2.08
PSME3-204ENST00000543428 NFKBIEO00221 500 aa28.03■■■□□ 2.08
PSME3-204ENST00000543428 CHL1O00533 1208 aa28.03■■■□□ 2.08
PSME3-204ENST00000543428 CCDC88AQ3V6T2 1871 aa28.02■■■□□ 2.08
PSME3-204ENST00000543428 ZC3H4Q9UPT8 1303 aaKnown RBP28.02■■■□□ 2.08
PSME3-204ENST00000543428 NPR1P16066 1061 aa28.02■■■□□ 2.08
PSME3-204ENST00000543428 SOGA3Q5TF21 947 aa28.02■■■□□ 2.08
PSME3-204ENST00000543428 C16orf71Q8IYS4 520 aaPredicted RBP28.02■■■□□ 2.08
PSME3-204ENST00000543428 NECTIN2Q92692 538 aa28.02■■■□□ 2.08
PSME3-204ENST00000543428 SLX4Q8IY92 1834 aa28.02■■■□□ 2.08
PSME3-204ENST00000543428 GPTP24298 496 aa28.01■■■□□ 2.07
PSME3-204ENST00000543428 TOMM70O94826 608 aa28■■■□□ 2.07
PSME3-204ENST00000543428 PRELPP51888 382 aa28■■■□□ 2.07
PSME3-204ENST00000543428 PDIA6Q15084 440 aa27.99■■■□□ 2.07
PSME3-204ENST00000543428 ARFGEF2Q9Y6D5 1785 aa27.99■■■□□ 2.07
PSME3-204ENST00000543428 KLRG2A4D1S0 409 aaPredicted RBP27.98■■■□□ 2.07
PSME3-204ENST00000543428 ANXA1P04083 346 aa27.98■■■□□ 2.07
PSME3-204ENST00000543428 HSPA6P17066 643 aa27.98■■■□□ 2.07
PSME3-204ENST00000543428 PROSER3Q2NL68 480 aa27.98■■■□□ 2.07
PSME3-204ENST00000543428 GIGYF2Q6Y7W6 1299 aaKnown RBP27.98■■■□□ 2.07
PSME3-204ENST00000543428 NUTM1Q86Y26 1132 aa27.98■■■□□ 2.07
PSME3-204ENST00000543428 TAOK3Q9H2K8 898 aa27.98■■■□□ 2.07
PSME3-204ENST00000543428 FER1L6Q2WGJ9 1857 aa27.98■■■□□ 2.07
PSME3-204ENST00000543428 APAF1O14727 1248 aa27.97■■■□□ 2.07
PSME3-204ENST00000543428 KRT24Q2M2I5 525 aa27.97■■■□□ 2.07
PSME3-204ENST00000543428 RRAGCQ9HB90 399 aa27.97■■■□□ 2.07
PSME3-204ENST00000543428 TIAM2Q8IVF5 1701 aa27.96■■■□□ 2.07
PSME3-204ENST00000543428 ERFEQ4G0M1 354 aa27.96■■■□□ 2.07
PSME3-204ENST00000543428 UBN2Q6ZU65 1347 aa27.95■■■□□ 2.07
PSME3-204ENST00000543428 ALDH1B1P30837 517 aa27.95■■■□□ 2.06
PSME3-204ENST00000543428 AIMP1Q12904 312 aaKnown RBP27.95■■■□□ 2.06
PSME3-204ENST00000543428 SUSD4Q5VX71 490 aa27.95■■■□□ 2.06
PSME3-204ENST00000543428 LRP10Q7Z4F1 713 aa27.95■■■□□ 2.06
PSME3-204ENST00000543428 ZNF34Q8IZ26 560 aa27.95■■■□□ 2.06
PSME3-204ENST00000543428 CFAP44Q96MT7 982 aa27.95■■■□□ 2.06
PSME3-204ENST00000543428 LTBP3Q9NS15 1303 aa27.94■■■□□ 2.06
PSME3-204ENST00000543428 TNRC6CQ9HCJ0 1690 aaKnown RBP27.94■■■□□ 2.06
PSME3-204ENST00000543428 GLTPD2A6NH11 291 aa27.94■■■□□ 2.06
PSME3-204ENST00000543428 PARP10Q53GL7 1025 aa27.94■■■□□ 2.06
PSME3-204ENST00000543428 CCDC93Q567U6 631 aa27.94■■■□□ 2.06
PSME3-204ENST00000543428 COPS6Q7L5N1 327 aa27.94■■■□□ 2.06
PSME3-204ENST00000543428 PPP1R42Q7Z4L9 355 aa27.94■■■□□ 2.06
PSME3-204ENST00000543428 ABCC12Q96J65 1359 aa27.94■■■□□ 2.06
PSME3-204ENST00000543428 IBTKQ9P2D0 1353 aaPredicted RBP27.94■■■□□ 2.06
PSME3-204ENST00000543428 CALD1Q05682 793 aaKnown RBP27.93■■■□□ 2.06
PSME3-204ENST00000543428 XAGE3Q8WTP9 111 aa27.93■■■□□ 2.06
PSME3-204ENST00000543428 DDX21Q9NR30 783 aaKnown RBP eCLIP27.93■■■□□ 2.06
PSME3-204ENST00000543428 HDGFL1Q5TGJ6 251 aa27.92■■■□□ 2.06
PSME3-204ENST00000543428 DPY19L2Q6NUT2 758 aa27.92■■■□□ 2.06
PSME3-204ENST00000543428 RBM46Q8TBY0 533 aaKnown RBP27.92■■■□□ 2.06
PSME3-204ENST00000543428 RPGRQ92834 1020 aaKnown RBP27.92■■■□□ 2.06
PSME3-204ENST00000543428 ZNF316A6NFI3 1004 aaPredicted RBP27.91■■■□□ 2.06
PSME3-204ENST00000543428 C7orf43Q8WVR3 580 aa27.91■■■□□ 2.06
PSME3-204ENST00000543428 DICER1Q9UPY3 1922 aaKnown RBP27.9■■■□□ 2.06
PSME3-204ENST00000543428 HOXB7P09629 217 aa27.9■■■□□ 2.06
PSME3-204ENST00000543428 HSP90AB3PQ58FF7 597 aa27.9■■■□□ 2.06
PSME3-204ENST00000543428 MBIPQ9NS73 344 aa27.9■■■□□ 2.06
PSME3-204ENST00000543428 CHPF2Q9P2E5 772 aa27.9■■■□□ 2.06
PSME3-204ENST00000543428 NTSR2O95665 410 aa27.89■■■□□ 2.06
PSME3-204ENST00000543428 CRY2Q49AN0 593 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms