RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 ZNHIT6Q9NWK9 470 aaKnown RBP16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 MAGEC2Q9UBF1 373 aaPredicted RBP16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 KIF2AO00139 706 aaPredicted RBP16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 GNG11P61952 73 aa16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 HS1BP3Q53T59 392 aa16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 CCDC94Q9BW85 323 aaPredicted RBP16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 NCKAP5LQ9HCH0 1330 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 LMOD1P29536 600 aaPredicted RBP16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 HSP90AB3PQ58FF7 597 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 MAP3K2Q9Y2U5 619 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 CABP4P57796 275 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 IFIT1P09914 478 aaKnown RBP16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 CHMLP26374 656 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 IMMTQ16891 758 aaKnown RBP16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 NOL10Q9BSC4 688 aaKnown RBP16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
RPS6KC1-206ENST00000543354 EPS15P42566 896 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 LMAN1P49257 510 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 DHX8Q14562 1220 aaKnown RBP16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 KRT222Q8N1A0 295 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 EVI5LQ96CN4 794 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 STX1AQ16623 288 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 AOPEPQ8N6M6 819 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 CTNNA3Q9UI47 895 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 FSD2A1L4K1 749 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 GOLGA8BA8MQT2 603 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 TDO2P48775 406 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 TAF3Q5VWG9 929 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 AMOTL1Q8IY63 956 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 BBXQ8WY36 941 aaPredicted RBP16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
RPS6KC1-206ENST00000543354 TXLNAP40222 546 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 JAKMIP3Q5VZ66 844 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.09■□□□□ 0.176e-7■■□□□ 12.1
RPS6KC1-206ENST00000543354 ORC3Q9UBD5 711 aaPredicted RBP16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 PIK3C2GO75747 1445 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 UBE3BQ7Z3V4 1068 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 CNNM3Q8NE01 707 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 ZHX3Q9H4I2 956 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 RAI14Q9P0K7 980 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 CALCOCO1Q9P1Z2 691 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 ABCF2Q9UG63 623 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 USP16Q9Y5T5 823 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 A0A087WZG4 1122 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 ZSCAN12O43309 604 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 PIP4K2AP48426 406 aaPredicted RBP16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 MCM6Q14566 821 aa16.09■□□□□ 0.17
RPS6KC1-206ENST00000543354 RIOK3O14730 519 aaKnown RBP16.08■□□□□ 0.17
RPS6KC1-206ENST00000543354 RDXP35241 583 aaKnown RBP16.08■□□□□ 0.17
RPS6KC1-206ENST00000543354 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.17
RPS6KC1-206ENST00000543354 CASQ1P31415 396 aa16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 EIF5P55010 431 aaKnown RBP16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 ANAPC15P60006 121 aa16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 MICU3Q86XE3 530 aa16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 DACH1Q9UI36 760 aa16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 PDIA4P13667 645 aaKnown RBP16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 ZNF445P59923 1031 aa16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 ATP8B2P98198 1209 aa16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 PAXBP1Q9Y5B6 917 aa16.08■□□□□ 0.16
RPS6KC1-206ENST00000543354 ABCA5Q8WWZ7 1642 aa16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 BLMP54132 1417 aaPredicted RBP16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 CTAGE5O15320 804 aa16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 LIG1P18858 919 aa16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 LARP1Q6PKG0 1096 aaKnown RBP16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 KIAA1328Q86T90 577 aa16.07■□□□□ 0.16
RPS6KC1-206ENST00000543354 MINDY4BA8MYZ0 360 aa16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 SSBP05455 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 CTTNBP2Q8WZ74 1663 aa16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 ZMYM4Q5VZL5 1548 aa16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 KDM5CP41229 1560 aa16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 KIF5CO60282 957 aa16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 GSDMDP57764 484 aa16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 ENOX2Q16206 610 aaKnown RBP16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 CCDC12Q8WUD4 166 aaPredicted RBP16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 GTF3C6Q969F1 213 aa16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 ANKRD36BQ8N2N9 1353 aa16.06■□□□□ 0.16
RPS6KC1-206ENST00000543354 GCC2Q8IWJ2 1684 aa16.05■□□□□ 0.16
RPS6KC1-206ENST00000543354 NUP153P49790 1475 aaKnown RBP16.05■□□□□ 0.16
RPS6KC1-206ENST00000543354 NEMFO60524 1076 aa16.05■□□□□ 0.16
RPS6KC1-206ENST00000543354 CDKL5O76039 1030 aa16.05■□□□□ 0.16
RPS6KC1-206ENST00000543354 KIAA0754O94854 1291 aa16.05■□□□□ 0.16
RPS6KC1-206ENST00000543354 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
RPS6KC1-206ENST00000543354 AIDAQ96BJ3 306 aa16.05■□□□□ 0.16
RPS6KC1-206ENST00000543354 NACAP1Q9BZK3 213 aa16.05■□□□□ 0.16
RPS6KC1-206ENST00000543354 GSPT1P15170 499 aaKnown RBP16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 ZFYVE27Q5T4F4 411 aa16.04■□□□□ 0.16
RPS6KC1-206ENST00000543354 MPHOSPH8Q99549 860 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms