RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TMEM266Q2M3C6 531 aa15.16■□□□□ 0.02
TNC-212ENST00000542877 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
TNC-212ENST00000542877 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
TNC-212ENST00000542877 NESP48681 1621 aa15.16■□□□□ 0.02
TNC-212ENST00000542877 POLR3GO15318 223 aaPredicted RBP15.16■□□□□ 0.02
TNC-212ENST00000542877 CLCN1P35523 988 aa15.16■□□□□ 0.02
TNC-212ENST00000542877 ZNF652Q9Y2D9 606 aa15.16■□□□□ 0.02
TNC-212ENST00000542877 GIMAP7Q8NHV1 300 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 CPLX3Q8WVH0 158 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 NEK1Q96PY6 1258 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 IQGAP2Q13576 1575 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 ZSCAN22P10073 491 aaPredicted RBP15.15■□□□□ 0.02
TNC-212ENST00000542877 SSR1P43307 286 aaKnown RBP15.15■□□□□ 0.02
TNC-212ENST00000542877 CEP135Q66GS9 1140 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 CCDC91Q7Z6B0 441 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 NAA15Q9BXJ9 866 aaKnown RBP15.15■□□□□ 0.02
TNC-212ENST00000542877 CCDC171Q6TFL3 1326 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 SLC5A1P13866 664 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 TMX3Q96JJ7 454 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 CCDC194A0A1B0GVG4 234 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 POLR3DP05423 398 aaPredicted RBP15.15■□□□□ 0.02
TNC-212ENST00000542877 IFFO1Q0D2I5 559 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 ALS2CR12Q96Q35 445 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 MBIPQ9NS73 344 aa15.15■□□□□ 0.02
TNC-212ENST00000542877 IARSP41252 1262 aaKnown RBP15.14■□□□□ 0.01
TNC-212ENST00000542877 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
TNC-212ENST00000542877 USP16Q9Y5T5 823 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 ADGRF5Q8IZF2 1346 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 POGZQ7Z3K3 1410 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 TNIP1Q15025 636 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
TNC-212ENST00000542877 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 CCDC178Q5BJE1 867 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 SNX21Q969T3 373 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 WASLO00401 505 aaPredicted RBP15.14■□□□□ 0.01
TNC-212ENST00000542877 BIN1O00499 593 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 RANBP6O60518 1105 aaKnown RBP15.14■□□□□ 0.01
TNC-212ENST00000542877 NLRP5P59047 1200 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 ANAPC15P60006 121 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 CCDC102BQ68D86 513 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
TNC-212ENST00000542877 HCLS1P14317 486 aaPredicted RBP15.13■□□□□ 0.01
TNC-212ENST00000542877 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
TNC-212ENST00000542877 A0A087WZG4 1122 aa15.13■□□□□ 0.01
TNC-212ENST00000542877 KRI1Q8N9T8 703 aaKnown RBP15.13■□□□□ 0.01
TNC-212ENST00000542877 TMOD3Q9NYL9 352 aa15.13■□□□□ 0.01
TNC-212ENST00000542877 ORC3Q9UBD5 711 aaPredicted RBP15.13■□□□□ 0.01
TNC-212ENST00000542877 GCOM1H8Y6P7 765 aaPredicted RBP15.13■□□□□ 0.01
TNC-212ENST00000542877 MYZAPP0CAP1 466 aa15.13■□□□□ 0.01
TNC-212ENST00000542877 MATR3P43243 847 aaKnown RBP eCLIP15.13■□□□□ 0.01
TNC-212ENST00000542877 TDRD12Q587J7 1177 aaKnown RBP15.13■□□□□ 0.01
TNC-212ENST00000542877 PPP1R42Q7Z4L9 355 aa15.13■□□□□ 0.01
TNC-212ENST00000542877 CCDC113Q9H0I3 377 aa15.13■□□□□ 0.01
TNC-212ENST00000542877 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
TNC-212ENST00000542877 PTCD1O75127 700 aaKnown RBP15.13■□□□□ 0.01
TNC-212ENST00000542877 CCDC82Q8N4S0 544 aa15.13■□□□□ 0.01
TNC-212ENST00000542877 RALGAPBQ86X10 1494 aa15.13■□□□□ 0.01
TNC-212ENST00000542877 AMPD3Q01432 767 aa15.12■□□□□ 0.01
TNC-212ENST00000542877 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
TNC-212ENST00000542877 DISP3Q9P2K9 1392 aa15.12■□□□□ 0.01
TNC-212ENST00000542877 ANKRD18BA2A2Z9 1011 aa15.12■□□□□ 0.01
TNC-212ENST00000542877 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
TNC-212ENST00000542877 FAM114A1Q8IWE2 563 aa15.12■□□□□ 0.01
TNC-212ENST00000542877 KIF14Q15058 1648 aa15.12■□□□□ 0.01
TNC-212ENST00000542877 ZNF444Q8N0Y2 327 aaPredicted RBP15.12■□□□□ 0.01
TNC-212ENST00000542877 SMC1AQ14683 1233 aaKnown RBP15.12■□□□□ 0.01
TNC-212ENST00000542877 SDSP20132 328 aa15.12■□□□□ 0.01
TNC-212ENST00000542877 MPHOSPH10O00566 681 aaKnown RBP15.11■□□□□ 0.01
TNC-212ENST00000542877 PRKCSHP14314 528 aaPredicted RBP15.11■□□□□ 0.01
TNC-212ENST00000542877 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 XRCC6P12956 609 aaKnown RBP eCLIP15.11■□□□□ 0.01
TNC-212ENST00000542877 GTF2F1P35269 517 aaKnown RBP eCLIP15.11■□□□□ 0.01
TNC-212ENST00000542877 BICDL1Q6ZP65 573 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 NCOA7Q8NI08 942 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 TMOD2Q9NZR1 351 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 GOLIM4O00461 696 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 HMGB2P26583 209 aaKnown RBP15.11■□□□□ 0.01
TNC-212ENST00000542877 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 USHBP1Q8N6Y0 703 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 EHBP1Q8NDI1 1231 aa15.11■□□□□ 0.01
TNC-212ENST00000542877 DZIP1Q86YF9 867 aaKnown RBP15.11■□□□□ 0.01
TNC-212ENST00000542877 CTR9Q6PD62 1173 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 FAM200AQ8TCP9 573 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
TNC-212ENST00000542877 TCP11L1Q9NUJ3 509 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 GNG11P61952 73 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 NOLC1Q14978 699 aaKnown RBP eCLIP15.1■□□□□ 0.01
TNC-212ENST00000542877 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 TMEM67Q5HYA8 995 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 RHPN1Q8TCX5 695 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 CUL7Q14999 1698 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 GSTTP1A0A1W2PQM5 241 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 METAP2P50579 478 aaKnown RBP eCLIP15.1■□□□□ 0.01
TNC-212ENST00000542877 DHX37Q8IY37 1157 aaKnown RBP15.1■□□□□ 0.01
TNC-212ENST00000542877 CALML4Q96GE6 196 aa15.1■□□□□ 0.01
TNC-212ENST00000542877 SF3B2Q13435 895 aaKnown RBP15.09■□□□□ 0.01
TNC-212ENST00000542877 TRMT112Q9UI30 125 aaKnown RBP15.09■□□□□ 0.01
TNC-212ENST00000542877 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
TNC-212ENST00000542877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms