RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PDRG1Q9NUG6 133 aa15.49■□□□□ 0.07
DDX11-223ENST00000542838 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
DDX11-223ENST00000542838 RUFY2Q8WXA3 655 aa15.48■□□□□ 0.07
DDX11-223ENST00000542838 PRIMPOLQ96LW4 560 aa15.48■□□□□ 0.07
DDX11-223ENST00000542838 GLRX3O76003 335 aaKnown RBP15.48■□□□□ 0.07
DDX11-223ENST00000542838 DNAAF4Q8WXU2 420 aa15.48■□□□□ 0.07
DDX11-223ENST00000542838 JAKMIP1Q96N16 626 aaKnown RBP15.48■□□□□ 0.07
DDX11-223ENST00000542838 AMOTL2Q9Y2J4 779 aa15.48■□□□□ 0.07
DDX11-223ENST00000542838 PRPF40BQ6NWY9 871 aaKnown RBP15.47■□□□□ 0.07
DDX11-223ENST00000542838 FUCA2Q9BTY2 467 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 MTMR6Q9Y217 621 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 TTC41PQ6P2S7 1318 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 PI4KAP2A4QPH2 592 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 HMGN5P82970 282 aaKnown RBP15.47■□□□□ 0.07
DDX11-223ENST00000542838 PTH1RQ03431 593 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 BEND3Q5T5X7 828 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 USHBP1Q8N6Y0 703 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 PI4KAP1Q8N8J0 262 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 NWD1Q149M9 1564 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 ADCK5Q3MIX3 580 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 VPS53Q5VIR6 699 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 JARID2Q92833 1246 aaPredicted RBP15.47■□□□□ 0.07
DDX11-223ENST00000542838 ZSCAN31Q96LW9 406 aaPredicted RBP15.47■□□□□ 0.07
DDX11-223ENST00000542838 CHPF2Q9P2E5 772 aa15.47■□□□□ 0.07
DDX11-223ENST00000542838 VPS37CA5D8V6 355 aaPredicted RBP15.46■□□□□ 0.07
DDX11-223ENST00000542838 CYP46A1Q9Y6A2 500 aa15.46■□□□□ 0.07
DDX11-223ENST00000542838 USP42Q9H9J4 1324 aaKnown RBP15.46■□□□□ 0.07
DDX11-223ENST00000542838 CLASRPQ8N2M8 674 aaKnown RBP15.45■□□□□ 0.06
DDX11-223ENST00000542838 SH2B1Q9NRF2 756 aaPredicted RBP15.45■□□□□ 0.06
DDX11-223ENST00000542838 CRYBG1Q9Y4K1 1723 aa15.45■□□□□ 0.06
DDX11-223ENST00000542838 TSC1Q92574 1164 aa15.45■□□□□ 0.06
DDX11-223ENST00000542838 EIF4A1P60842 406 aaKnown RBP15.45■□□□□ 0.06
DDX11-223ENST00000542838 DDX54Q8TDD1 881 aaKnown RBP15.45■□□□□ 0.06
DDX11-223ENST00000542838 ZSWIM6Q9HCJ5 1215 aa15.45■□□□□ 0.06
DDX11-223ENST00000542838 SPTLC3Q9NUV7 552 aa15.45■□□□□ 0.06
DDX11-223ENST00000542838 ANXA1P04083 346 aa15.44■□□□□ 0.06
DDX11-223ENST00000542838 AP5Z1O43299 807 aa15.44■□□□□ 0.06
DDX11-223ENST00000542838 DIP2AQ14689 1571 aa15.44■□□□□ 0.06
DDX11-223ENST00000542838 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
DDX11-223ENST00000542838 TM6SF1Q9BZW5 370 aa15.44■□□□□ 0.06
DDX11-223ENST00000542838 NECAB1Q8N987 351 aa15.43■□□□□ 0.06
DDX11-223ENST00000542838 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
DDX11-223ENST00000542838 ME3Q16798 604 aa15.43■□□□□ 0.06
DDX11-223ENST00000542838 GPATCH3Q96I76 525 aa15.43■□□□□ 0.06
DDX11-223ENST00000542838 EID1Q9Y6B2 187 aa15.43■□□□□ 0.06
DDX11-223ENST00000542838 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
DDX11-223ENST00000542838 CCDC192P0DO97 292 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 GTF2F1P35269 517 aaKnown RBP eCLIP15.42■□□□□ 0.06
DDX11-223ENST00000542838 ST3GAL1Q11201 340 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 CCDC94Q9BW85 323 aaPredicted RBP15.42■□□□□ 0.06
DDX11-223ENST00000542838 LGR6Q9HBX8 967 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 ZKSCAN1P17029 563 aaPredicted RBP15.42■□□□□ 0.06
DDX11-223ENST00000542838 KCNJ4P48050 445 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 ABTB2Q8N961 1025 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 SPC24Q8NBT2 197 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 KCNQ3O43525 872 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 NECTIN1Q15223 517 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 LARP1BQ659C4 914 aaKnown RBP15.42■□□□□ 0.06
DDX11-223ENST00000542838 KCNB2Q92953 911 aa15.42■□□□□ 0.06
DDX11-223ENST00000542838 CEMIPQ8WUJ3 1361 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 CCDC171Q6TFL3 1326 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 HOXB7P09629 217 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 CHMP4AQ9BY43 222 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 PA2G4Q9UQ80 394 aaKnown RBP15.41■□□□□ 0.06
DDX11-223ENST00000542838 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 TPM3P06753 285 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 C14orf37Q86TY3 774 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 ZNF710Q8N1W2 664 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 EVI5LQ96CN4 794 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 KCNF1Q9H3M0 494 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 PYCARDQ9ULZ3 195 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 KIF3AQ9Y496 699 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 RBM8AQ9Y5S9 174 aaKnown RBP15.41■□□□□ 0.06
DDX11-223ENST00000542838 ADCY9O60503 1353 aa15.41■□□□□ 0.06
DDX11-223ENST00000542838 GOLGA6L6A8MZA4 724 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 KRT85P78386 507 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 MTX1Q13505 466 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 SMAP1Q8IYB5 467 aaPredicted RBP15.4■□□□□ 0.06
DDX11-223ENST00000542838 KIAA1524Q8TCG1 905 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 C9orf78Q9NZ63 289 aaPredicted RBP15.4■□□□□ 0.06
DDX11-223ENST00000542838 CREB3L3Q68CJ9 461 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 TTC6Q86TZ1 520 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 TPCN1Q9ULQ1 816 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 FAM177BA6PVY3 158 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 AACSQ86V21 672 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 ERC1Q8IUD2 1116 aa15.4■□□□□ 0.06
DDX11-223ENST00000542838 MARF1Q9Y4F3 1742 aaKnown RBP15.39■□□□□ 0.05
DDX11-223ENST00000542838 NUP62CLQ9H1M0 184 aa15.39■□□□□ 0.05
DDX11-223ENST00000542838 MAP3K11Q16584 847 aa15.39■□□□□ 0.05
DDX11-223ENST00000542838 CDC37L1Q7L3B6 337 aa15.39■□□□□ 0.05
DDX11-223ENST00000542838 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
DDX11-223ENST00000542838 TEFQ10587 303 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 CAMK4Q16566 473 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 FAM173BQ6P4H8 233 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 FAM200AQ8TCP9 573 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 FAM227BQ96M60 508 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 BTBD11A6QL63 1104 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 LIG1P18858 919 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 PSMA5P28066 241 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms