RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 NBPF5PQ86XG9 351 aaPredicted RBP22.84■■□□□ 1.25
LTBR-210ENST00000542830 GPBP1L1Q9HC44 474 aaPredicted RBP22.84■■□□□ 1.25
LTBR-210ENST00000542830 DLEC1Q9Y238 1755 aa22.84■■□□□ 1.25
LTBR-210ENST00000542830 ERVV-1B6SEH8 477 aa22.83■■□□□ 1.25
LTBR-210ENST00000542830 KIF6Q6ZMV9 814 aa22.83■■□□□ 1.25
LTBR-210ENST00000542830 NIP7Q9Y221 180 aaKnown RBP eCLIP22.83■■□□□ 1.25
LTBR-210ENST00000542830 CHL1O00533 1208 aa22.82■■□□□ 1.24
LTBR-210ENST00000542830 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
LTBR-210ENST00000542830 MAP3K15Q6ZN16 1313 aa22.82■■□□□ 1.24
LTBR-210ENST00000542830 MYL6BP14649 208 aa22.81■■□□□ 1.24
LTBR-210ENST00000542830 C1QTNF8P60827 252 aa22.81■■□□□ 1.24
LTBR-210ENST00000542830 TPTE2Q6XPS3 522 aa22.81■■□□□ 1.24
LTBR-210ENST00000542830 CCDC24Q8N4L8 307 aa22.81■■□□□ 1.24
LTBR-210ENST00000542830 ANKRD31Q8N7Z5 1873 aa22.81■■□□□ 1.24
LTBR-210ENST00000542830 HLFQ16534 295 aa22.8■■□□□ 1.24
LTBR-210ENST00000542830 ZNF622Q969S3 477 aaKnown RBP eCLIP22.8■■□□□ 1.24
LTBR-210ENST00000542830 EIF2S2P20042 333 aaKnown RBP22.79■■□□□ 1.24
LTBR-210ENST00000542830 C9orf131Q5VYM1 1079 aa22.79■■□□□ 1.24
LTBR-210ENST00000542830 ZNF526Q8TF50 670 aaPredicted RBP22.79■■□□□ 1.24
LTBR-210ENST00000542830 LAS1LQ9Y4W2 734 aaKnown RBP22.79■■□□□ 1.24
LTBR-210ENST00000542830 TTLL7Q6ZT98 887 aa22.78■■□□□ 1.24
LTBR-210ENST00000542830 APAF1O14727 1248 aa22.77■■□□□ 1.24
LTBR-210ENST00000542830 CALD1Q05682 793 aaKnown RBP22.77■■□□□ 1.24
LTBR-210ENST00000542830 STYK1Q6J9G0 422 aa22.77■■□□□ 1.24
LTBR-210ENST00000542830 CNKSR1Q969H4 720 aa22.77■■□□□ 1.24
LTBR-210ENST00000542830 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
LTBR-210ENST00000542830 ANP32CO43423 234 aa22.76■■□□□ 1.23
LTBR-210ENST00000542830 MASTLQ96GX5 879 aa22.76■■□□□ 1.23
LTBR-210ENST00000542830 NYXQ9GZU5 481 aa22.76■■□□□ 1.23
LTBR-210ENST00000542830 HOXB7P09629 217 aa22.75■■□□□ 1.23
LTBR-210ENST00000542830 SRGNP10124 158 aa22.75■■□□□ 1.23
LTBR-210ENST00000542830 GTF2E1P29083 439 aaPredicted RBP22.75■■□□□ 1.23
LTBR-210ENST00000542830 ZBTB3Q9H5J0 574 aa22.75■■□□□ 1.23
LTBR-210ENST00000542830 RNF181Q9P0P0 153 aa22.75■■□□□ 1.23
LTBR-210ENST00000542830 PDIA6Q15084 440 aa22.74■■□□□ 1.23
LTBR-210ENST00000542830 LRP10Q7Z4F1 713 aa22.74■■□□□ 1.23
LTBR-210ENST00000542830 COL11A2P13942 1736 aaPredicted RBP22.74■■□□□ 1.23
LTBR-210ENST00000542830 NUP98P52948 1817 aa22.73■■□□□ 1.23
LTBR-210ENST00000542830 KLRG2A4D1S0 409 aaPredicted RBP22.73■■□□□ 1.23
LTBR-210ENST00000542830 FAM177BA6PVY3 158 aa22.73■■□□□ 1.23
LTBR-210ENST00000542830 GIGYF2Q6Y7W6 1299 aaKnown RBP22.73■■□□□ 1.23
LTBR-210ENST00000542830 IBTKQ9P2D0 1353 aaPredicted RBP22.73■■□□□ 1.23
LTBR-210ENST00000542830 NPR1P16066 1061 aa22.72■■□□□ 1.23
LTBR-210ENST00000542830 LMNB1P20700 586 aa22.72■■□□□ 1.23
LTBR-210ENST00000542830 RASSF7Q02833 373 aa22.72■■□□□ 1.23
LTBR-210ENST00000542830 ZC3H4Q9UPT8 1303 aaKnown RBP22.72■■□□□ 1.23
LTBR-210ENST00000542830 KRT24Q2M2I5 525 aa22.71■■□□□ 1.23
LTBR-210ENST00000542830 PROSER3Q2NL68 480 aa22.71■■□□□ 1.23
LTBR-210ENST00000542830 CCDC184Q52MB2 194 aa22.71■■□□□ 1.23
LTBR-210ENST00000542830 SOGA3Q5TF21 947 aa22.71■■□□□ 1.23
LTBR-210ENST00000542830 DDX21Q9NR30 783 aaKnown RBP eCLIP22.71■■□□□ 1.23
LTBR-210ENST00000542830 IFT57Q9NWB7 429 aa22.71■■□□□ 1.23
LTBR-210ENST00000542830 SBF1O95248 1867 aa22.71■■□□□ 1.23
LTBR-210ENST00000542830 C21orf2O43822 256 aa22.7■■□□□ 1.22
LTBR-210ENST00000542830 ANXA1P04083 346 aa22.7■■□□□ 1.22
LTBR-210ENST00000542830 ZNF853P0CG23 659 aa22.7■■□□□ 1.22
LTBR-210ENST00000542830 GNAI1P63096 354 aa22.7■■□□□ 1.22
LTBR-210ENST00000542830 HDGFL1Q5TGJ6 251 aa22.7■■□□□ 1.22
LTBR-210ENST00000542830 PRPF40BQ6NWY9 871 aaKnown RBP22.7■■□□□ 1.22
LTBR-210ENST00000542830 ZNF34Q8IZ26 560 aa22.7■■□□□ 1.22
LTBR-210ENST00000542830 NECTIN2Q92692 538 aa22.7■■□□□ 1.22
LTBR-210ENST00000542830 MBIPQ9NS73 344 aa22.7■■□□□ 1.22
LTBR-210ENST00000542830 GPTP24298 496 aa22.69■■□□□ 1.22
LTBR-210ENST00000542830 PARP10Q53GL7 1025 aa22.69■■□□□ 1.22
LTBR-210ENST00000542830 UBN2Q6ZU65 1347 aa22.68■■□□□ 1.22
LTBR-210ENST00000542830 NFKBIEO00221 500 aa22.68■■□□□ 1.22
LTBR-210ENST00000542830 HSP90AB3PQ58FF7 597 aa22.68■■□□□ 1.22
LTBR-210ENST00000542830 COPS6Q7L5N1 327 aa22.68■■□□□ 1.22
LTBR-210ENST00000542830 PPP1R42Q7Z4L9 355 aa22.68■■□□□ 1.22
LTBR-210ENST00000542830 MRS2Q9HD23 443 aa22.68■■□□□ 1.22
LTBR-210ENST00000542830 RIC1Q4ADV7 1423 aa22.67■■□□□ 1.22
LTBR-210ENST00000542830 KDM2BQ8NHM5 1336 aa22.67■■□□□ 1.22
LTBR-210ENST00000542830 KIF3CO14782 793 aa22.67■■□□□ 1.22
LTBR-210ENST00000542830 DUSP27Q5VZP5 1158 aa22.67■■□□□ 1.22
LTBR-210ENST00000542830 NUTM1Q86Y26 1132 aa22.67■■□□□ 1.22
LTBR-210ENST00000542830 XAGE3Q8WTP9 111 aa22.67■■□□□ 1.22
LTBR-210ENST00000542830 CHPF2Q9P2E5 772 aa22.67■■□□□ 1.22
LTBR-210ENST00000542830 ZNF219Q9P2Y4 722 aaPredicted RBP22.67■■□□□ 1.22
LTBR-210ENST00000542830 DBF4Q9UBU7 674 aaPredicted RBP22.67■■□□□ 1.22
LTBR-210ENST00000542830 ARFGEF2Q9Y6D5 1785 aa22.67■■□□□ 1.22
LTBR-210ENST00000542830 LTBP3Q9NS15 1303 aa22.66■■□□□ 1.22
LTBR-210ENST00000542830 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
LTBR-210ENST00000542830 AIMP1Q12904 312 aaKnown RBP22.66■■□□□ 1.22
LTBR-210ENST00000542830 SUSD4Q5VX71 490 aa22.66■■□□□ 1.22
LTBR-210ENST00000542830 SLX4Q8IY92 1834 aa22.66■■□□□ 1.22
LTBR-210ENST00000542830 ABCC12Q96J65 1359 aa22.65■■□□□ 1.22
LTBR-210ENST00000542830 SENP3-EIF4A1A0A087X0R7 540 aa22.65■■□□□ 1.22
LTBR-210ENST00000542830 CRY2Q49AN0 593 aa22.65■■□□□ 1.22
LTBR-210ENST00000542830 ERFEQ4G0M1 354 aa22.65■■□□□ 1.22
LTBR-210ENST00000542830 TAOK3Q9H2K8 898 aa22.65■■□□□ 1.22
LTBR-210ENST00000542830 NTSR2O95665 410 aa22.64■■□□□ 1.21
LTBR-210ENST00000542830 CCDC27Q2M243 656 aa22.64■■□□□ 1.21
LTBR-210ENST00000542830 FER1L6Q2WGJ9 1857 aa22.64■■□□□ 1.21
LTBR-210ENST00000542830 RNF123Q5XPI4 1314 aa22.63■■□□□ 1.21
LTBR-210ENST00000542830 PRELPP51888 382 aa22.63■■□□□ 1.21
LTBR-210ENST00000542830 NCBP3Q53F19 620 aaKnown RBP22.63■■□□□ 1.21
LTBR-210ENST00000542830 CCDC93Q567U6 631 aa22.63■■□□□ 1.21
LTBR-210ENST00000542830 C7orf43Q8WVR3 580 aa22.63■■□□□ 1.21
LTBR-210ENST00000542830 UTP14AQ9BVJ6 771 aaKnown RBP22.63■■□□□ 1.21
LTBR-210ENST00000542830 CHMP4AQ9BY43 222 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms