RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 RGL2O15211 777 aa21.52■■□□□ 1.04
CCND1-205ENST00000542367 MYL6BP14649 208 aa21.52■■□□□ 1.04
CCND1-205ENST00000542367 ST5P78524 1137 aa21.52■■□□□ 1.04
CCND1-205ENST00000542367 HLFQ16534 295 aa21.52■■□□□ 1.04
CCND1-205ENST00000542367 PDZRN3Q9UPQ7 1066 aa21.52■■□□□ 1.04
CCND1-205ENST00000542367 NIP7Q9Y221 180 aaKnown RBP eCLIP21.52■■□□□ 1.04
CCND1-205ENST00000542367 ANKRD31Q8N7Z5 1873 aa21.52■■□□□ 1.03
CCND1-205ENST00000542367 C9orf131Q5VYM1 1079 aa21.51■■□□□ 1.03
CCND1-205ENST00000542367 NBPF5PQ86XG9 351 aaPredicted RBP21.51■■□□□ 1.03
CCND1-205ENST00000542367 ZNF622Q969S3 477 aaKnown RBP eCLIP21.51■■□□□ 1.03
CCND1-205ENST00000542367 DLEC1Q9Y238 1755 aa21.51■■□□□ 1.03
CCND1-205ENST00000542367 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
CCND1-205ENST00000542367 TTLL7Q6ZT98 887 aa21.5■■□□□ 1.03
CCND1-205ENST00000542367 LAS1LQ9Y4W2 734 aaKnown RBP21.5■■□□□ 1.03
CCND1-205ENST00000542367 ZNF316A6NFI3 1004 aaPredicted RBP21.48■■□□□ 1.03
CCND1-205ENST00000542367 FAM177BA6PVY3 158 aa21.48■■□□□ 1.03
CCND1-205ENST00000542367 ERVV-1B6SEH8 477 aa21.48■■□□□ 1.03
CCND1-205ENST00000542367 CHL1O00533 1208 aa21.48■■□□□ 1.03
CCND1-205ENST00000542367 TPTE2Q6XPS3 522 aa21.48■■□□□ 1.03
CCND1-205ENST00000542367 KIF6Q6ZMV9 814 aa21.48■■□□□ 1.03
CCND1-205ENST00000542367 ERBB4Q15303 1308 aa21.48■■□□□ 1.03
CCND1-205ENST00000542367 MAP3K15Q6ZN16 1313 aa21.48■■□□□ 1.03
CCND1-205ENST00000542367 APAF1O14727 1248 aa21.46■■□□□ 1.03
CCND1-205ENST00000542367 RASSF7Q02833 373 aa21.46■■□□□ 1.03
CCND1-205ENST00000542367 RNF181Q9P0P0 153 aa21.46■■□□□ 1.03
CCND1-205ENST00000542367 SRGNP10124 158 aa21.45■■□□□ 1.02
CCND1-205ENST00000542367 PDIA6Q15084 440 aa21.45■■□□□ 1.02
CCND1-205ENST00000542367 CCDC184Q52MB2 194 aa21.45■■□□□ 1.02
CCND1-205ENST00000542367 ZBTB3Q9H5J0 574 aa21.45■■□□□ 1.02
CCND1-205ENST00000542367 ZNF219Q9P2Y4 722 aaPredicted RBP21.45■■□□□ 1.02
CCND1-205ENST00000542367 COL11A2P13942 1736 aaPredicted RBP21.44■■□□□ 1.02
CCND1-205ENST00000542367 C21orf2O43822 256 aa21.44■■□□□ 1.02
CCND1-205ENST00000542367 KRT24Q2M2I5 525 aa21.44■■□□□ 1.02
CCND1-205ENST00000542367 STYK1Q6J9G0 422 aa21.44■■□□□ 1.02
CCND1-205ENST00000542367 NECTIN2Q92692 538 aa21.44■■□□□ 1.02
CCND1-205ENST00000542367 CNKSR1Q969H4 720 aa21.44■■□□□ 1.02
CCND1-205ENST00000542367 MASTLQ96GX5 879 aa21.44■■□□□ 1.02
CCND1-205ENST00000542367 NUP98P52948 1817 aa21.43■■□□□ 1.02
CCND1-205ENST00000542367 SBF1O95248 1867 aa21.43■■□□□ 1.02
CCND1-205ENST00000542367 ANXA1P04083 346 aa21.43■■□□□ 1.02
CCND1-205ENST00000542367 GTF2E1P29083 439 aaPredicted RBP21.43■■□□□ 1.02
CCND1-205ENST00000542367 PROSER3Q2NL68 480 aa21.43■■□□□ 1.02
CCND1-205ENST00000542367 LRP10Q7Z4F1 713 aa21.43■■□□□ 1.02
CCND1-205ENST00000542367 KIF3CO14782 793 aa21.42■■□□□ 1.02
CCND1-205ENST00000542367 CFAP44Q96MT7 982 aa21.42■■□□□ 1.02
CCND1-205ENST00000542367 SENP3-EIF4A1A0A087X0R7 540 aa21.41■■□□□ 1.02
CCND1-205ENST00000542367 KLRG2A4D1S0 409 aaPredicted RBP21.41■■□□□ 1.02
CCND1-205ENST00000542367 NFKBIEO00221 500 aa21.41■■□□□ 1.02
CCND1-205ENST00000542367 LMNB1P20700 586 aa21.41■■□□□ 1.02
CCND1-205ENST00000542367 GPTP24298 496 aa21.41■■□□□ 1.02
CCND1-205ENST00000542367 PRELPP51888 382 aa21.41■■□□□ 1.02
CCND1-205ENST00000542367 GIGYF2Q6Y7W6 1299 aaKnown RBP21.41■■□□□ 1.02
CCND1-205ENST00000542367 NYXQ9GZU5 481 aa21.41■■□□□ 1.02
CCND1-205ENST00000542367 PRPF40BQ6NWY9 871 aaKnown RBP21.4■■□□□ 1.02
CCND1-205ENST00000542367 ZNF34Q8IZ26 560 aa21.4■■□□□ 1.02
CCND1-205ENST00000542367 SLX4Q8IY92 1834 aa21.39■■□□□ 1.02
CCND1-205ENST00000542367 NPR1P16066 1061 aa21.39■■□□□ 1.01
CCND1-205ENST00000542367 NUTM1Q86Y26 1132 aa21.39■■□□□ 1.01
CCND1-205ENST00000542367 UBN2Q6ZU65 1347 aa21.38■■□□□ 1.01
CCND1-205ENST00000542367 AIMP1Q12904 312 aaKnown RBP21.38■■□□□ 1.01
CCND1-205ENST00000542367 ERFEQ4G0M1 354 aa21.38■■□□□ 1.01
CCND1-205ENST00000542367 SUSD4Q5VX71 490 aa21.38■■□□□ 1.01
CCND1-205ENST00000542367 COPS6Q7L5N1 327 aa21.38■■□□□ 1.01
CCND1-205ENST00000542367 NMRK2Q9NPI5 230 aa21.38■■□□□ 1.01
CCND1-205ENST00000542367 DDX21Q9NR30 783 aaKnown RBP eCLIP21.38■■□□□ 1.01
CCND1-205ENST00000542367 MBIPQ9NS73 344 aa21.38■■□□□ 1.01
CCND1-205ENST00000542367 ANP32CO43423 234 aa21.37■■□□□ 1.01
CCND1-205ENST00000542367 ZNF853P0CG23 659 aa21.37■■□□□ 1.01
CCND1-205ENST00000542367 XAGE3Q8WTP9 111 aa21.37■■□□□ 1.01
CCND1-205ENST00000542367 CACNA1SQ13698 1873 aa21.37■■□□□ 1.01
CCND1-205ENST00000542367 KDM2BQ8NHM5 1336 aa21.36■■□□□ 1.01
CCND1-205ENST00000542367 HOXB7P09629 217 aa21.36■■□□□ 1.01
CCND1-205ENST00000542367 HDGFL1Q5TGJ6 251 aa21.36■■□□□ 1.01
CCND1-205ENST00000542367 CHPF2Q9P2E5 772 aa21.36■■□□□ 1.01
CCND1-205ENST00000542367 CCDC88AQ3V6T2 1871 aa21.36■■□□□ 1.01
CCND1-205ENST00000542367 ABCC12Q96J65 1359 aa21.36■■□□□ 1.01
CCND1-205ENST00000542367 GNAI1P63096 354 aa21.35■■□□□ 1.01
CCND1-205ENST00000542367 CALD1Q05682 793 aaKnown RBP21.35■■□□□ 1.01
CCND1-205ENST00000542367 SOGA3Q5TF21 947 aa21.35■■□□□ 1.01
CCND1-205ENST00000542367 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
CCND1-205ENST00000542367 IFT57Q9NWB7 429 aa21.35■■□□□ 1.01
CCND1-205ENST00000542367 ZC3H4Q9UPT8 1303 aaKnown RBP21.34■■□□□ 1.01
CCND1-205ENST00000542367 ALDH1B1P30837 517 aa21.34■■□□□ 1.01
CCND1-205ENST00000542367 PARP10Q53GL7 1025 aa21.34■■□□□ 1.01
CCND1-205ENST00000542367 PPP1R42Q7Z4L9 355 aa21.34■■□□□ 1.01
CCND1-205ENST00000542367 C7orf43Q8WVR3 580 aa21.34■■□□□ 1.01
CCND1-205ENST00000542367 FER1L6Q2WGJ9 1857 aa21.34■■□□□ 1.01
CCND1-205ENST00000542367 IBTKQ9P2D0 1353 aaPredicted RBP21.34■■□□□ 1.01
CCND1-205ENST00000542367 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1.01
CCND1-205ENST00000542367 NTSR2O95665 410 aa21.33■■□□□ 1.01
CCND1-205ENST00000542367 TAOK3Q9H2K8 898 aa21.33■■□□□ 1.01
CCND1-205ENST00000542367 RRAGCQ9HB90 399 aa21.33■■□□□ 1.01
CCND1-205ENST00000542367 MRS2Q9HD23 443 aa21.33■■□□□ 1.01
CCND1-205ENST00000542367 TOMM70O94826 608 aa21.32■■□□□ 1
CCND1-205ENST00000542367 CRY2Q49AN0 593 aa21.32■■□□□ 1
CCND1-205ENST00000542367 DBF4Q9UBU7 674 aaPredicted RBP21.32■■□□□ 1
CCND1-205ENST00000542367 LTBP3Q9NS15 1303 aa21.31■■□□□ 1
CCND1-205ENST00000542367 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
CCND1-205ENST00000542367 ELL2O00472 640 aaPredicted RBP21.31■■□□□ 1
CCND1-205ENST00000542367 CCDC93Q567U6 631 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms