RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 PRSS36Q5K4E3 855 aa7.91□□□□□ -1.14
KNTC1-211ENST00000541427 CFAP70Q5T0N1 1121 aa7.91□□□□□ -1.14
KNTC1-211ENST00000541427 USP17L2Q6R6M4 530 aa7.91□□□□□ -1.14
KNTC1-211ENST00000541427 USP17L1Q7RTZ2 530 aa7.91□□□□□ -1.14
KNTC1-211ENST00000541427 NIFKQ9BYG3 293 aaKnown RBP7.91□□□□□ -1.14
KNTC1-211ENST00000541427 MAFBQ9Y5Q3 323 aaPredicted RBP7.91□□□□□ -1.14
KNTC1-211ENST00000541427 PLEKHM2Q8IWE5 1019 aa7.9□□□□□ -1.14
KNTC1-211ENST00000541427 ELOA3CA0A087WX78 387 aaPredicted RBP7.89□□□□□ -1.15
KNTC1-211ENST00000541427 ELOA3DA6NLF2 546 aaPredicted RBP7.89□□□□□ -1.15
KNTC1-211ENST00000541427 ALAS2P22557 587 aa7.89□□□□□ -1.15
KNTC1-211ENST00000541427 ELOA3BQ3SY89 546 aa7.89□□□□□ -1.15
KNTC1-211ENST00000541427 CCDC82Q8N4S0 544 aa7.89□□□□□ -1.15
KNTC1-211ENST00000541427 ELOA3Q8NG57 546 aa7.89□□□□□ -1.15
KNTC1-211ENST00000541427 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
KNTC1-211ENST00000541427 FAM157BP0CG42 384 aa7.88□□□□□ -1.15
KNTC1-211ENST00000541427 EML3Q32P44 896 aa7.88□□□□□ -1.15
KNTC1-211ENST00000541427 LZTS3O60299 673 aaPredicted RBP7.87□□□□□ -1.15
KNTC1-211ENST00000541427 INHAP05111 366 aa7.87□□□□□ -1.15
KNTC1-211ENST00000541427 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
KNTC1-211ENST00000541427 SCNN1DP51172 638 aa7.87□□□□□ -1.15
KNTC1-211ENST00000541427 NBPF1Q3BBV0 1214 aa7.87□□□□□ -1.15
KNTC1-211ENST00000541427 KRTAP9-9Q9BYP9 154 aa7.87□□□□□ -1.15
KNTC1-211ENST00000541427 KRTAP9-4Q9BYQ2 154 aa7.87□□□□□ -1.15
KNTC1-211ENST00000541427 STRN4Q9NRL3 753 aa7.87□□□□□ -1.15
KNTC1-211ENST00000541427 MARK1Q9P0L2 795 aa7.87□□□□□ -1.15
KNTC1-211ENST00000541427 GJA3Q9Y6H8 435 aa7.87□□□□□ -1.15
KNTC1-211ENST00000541427 BTBD11A6QL63 1104 aa7.86□□□□□ -1.15
KNTC1-211ENST00000541427 TATP17735 454 aaPredicted RBP7.86□□□□□ -1.15
KNTC1-211ENST00000541427 GDF10P55107 478 aa7.86□□□□□ -1.15
KNTC1-211ENST00000541427 CCDC97Q96F63 343 aaPredicted RBP7.86□□□□□ -1.15
KNTC1-211ENST00000541427 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
KNTC1-211ENST00000541427 ZIC5Q96T25 663 aa7.86□□□□□ -1.15
KNTC1-211ENST00000541427 SERPINA10Q9UK55 444 aa7.86□□□□□ -1.15
KNTC1-211ENST00000541427 SMTNP53814 917 aa7.85□□□□□ -1.15
KNTC1-211ENST00000541427 KANK4Q5T7N3 995 aaPredicted RBP7.85□□□□□ -1.15
KNTC1-211ENST00000541427 SYT9Q86SS6 491 aa7.85□□□□□ -1.15
KNTC1-211ENST00000541427 SIRT1Q96EB6 747 aa7.85□□□□□ -1.15
KNTC1-211ENST00000541427 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
KNTC1-211ENST00000541427 NOD1Q9Y239 953 aa7.85□□□□□ -1.15
KNTC1-211ENST00000541427 PCDHGA11Q9Y5H2 935 aa7.85□□□□□ -1.15
KNTC1-211ENST00000541427 M0R082 166 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 RFX1P22670 979 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 GTF2IP78347 998 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 CLDN10P78369 228 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 TRIM28Q13263 835 aaKnown RBP7.84□□□□□ -1.15
KNTC1-211ENST00000541427 COL9A3Q14050 684 aaPredicted RBP7.84□□□□□ -1.15
KNTC1-211ENST00000541427 LRP8Q14114 963 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 GRIK4Q16099 956 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 ZNF417Q8TAU3 575 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 ZNF587Q96SQ5 575 aaPredicted RBP7.84□□□□□ -1.15
KNTC1-211ENST00000541427 MDFIQ99750 246 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 ZDHHC3Q9NYG2 299 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 KIAA1024Q9UPX6 916 aa7.84□□□□□ -1.15
KNTC1-211ENST00000541427 EFSO43281 561 aa7.83□□□□□ -1.16
KNTC1-211ENST00000541427 LAMC2Q13753 1193 aa7.83□□□□□ -1.16
KNTC1-211ENST00000541427 SAMD5Q5TGI4 173 aa7.83□□□□□ -1.16
KNTC1-211ENST00000541427 KRTAP19-1Q8IUB9 90 aa7.83□□□□□ -1.16
KNTC1-211ENST00000541427 ZNF295-AS1Q8N0V1 137 aa7.83□□□□□ -1.16
KNTC1-211ENST00000541427 SRPK2P78362 688 aaKnown RBP7.82□□□□□ -1.16
KNTC1-211ENST00000541427 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
KNTC1-211ENST00000541427 ADARB2-AS1A8MUL3 147 aa7.81□□□□□ -1.16
KNTC1-211ENST00000541427 ZBTB7BO15156 539 aaPredicted RBP7.81□□□□□ -1.16
KNTC1-211ENST00000541427 HYAL3O43820 417 aaPredicted RBP7.81□□□□□ -1.16
KNTC1-211ENST00000541427 SIN3BO75182 1162 aa7.81□□□□□ -1.16
KNTC1-211ENST00000541427 CRTC2Q53ET0 693 aaPredicted RBP7.81□□□□□ -1.16
KNTC1-211ENST00000541427 BICDL1Q6ZP65 573 aa7.81□□□□□ -1.16
KNTC1-211ENST00000541427 C8orf86Q6ZUL3 223 aa7.81□□□□□ -1.16
KNTC1-211ENST00000541427 OGFOD1Q8N543 542 aa7.81□□□□□ -1.16
KNTC1-211ENST00000541427 PRDM6Q9NQX0 595 aa7.81□□□□□ -1.16
KNTC1-211ENST00000541427 SERTAD1Q9UHV2 236 aa7.81□□□□□ -1.16
KNTC1-211ENST00000541427 STARD13Q9Y3M8 1113 aa7.81□□□□□ -1.16
KNTC1-211ENST00000541427 TMEM229AB2RXF0 380 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 CDK2AP1O14519 115 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 DKK1O94907 266 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 ALBP02768 609 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 H2AFB1P0C5Y9 115 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 H2AFB2P0C5Z0 115 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 CDCA8Q53HL2 280 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 TRIM50Q86XT4 487 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 GOLGA2P5Q9HBQ8 144 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 CABP1Q9NZU7 370 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 IQSEC3Q9UPP2 1182 aaPredicted RBP7.8□□□□□ -1.16
KNTC1-211ENST00000541427 USP3Q9Y6I4 520 aa7.8□□□□□ -1.16
KNTC1-211ENST00000541427 RASA1P20936 1047 aa7.79□□□□□ -1.16
KNTC1-211ENST00000541427 MICALL1Q8N3F8 863 aa7.79□□□□□ -1.16
KNTC1-211ENST00000541427 ARID3AQ99856 593 aa7.79□□□□□ -1.16
KNTC1-211ENST00000541427 VRTNQ9H8Y1 702 aa7.79□□□□□ -1.16
KNTC1-211ENST00000541427 PARP3Q9Y6F1 533 aa7.79□□□□□ -1.16
KNTC1-211ENST00000541427 A6NJY4 79 aa7.78□□□□□ -1.16
KNTC1-211ENST00000541427 NID1P14543 1247 aa7.78□□□□□ -1.16
KNTC1-211ENST00000541427 ATP1A2P50993 1020 aa7.78□□□□□ -1.16
KNTC1-211ENST00000541427 PSME1Q06323 249 aa7.78□□□□□ -1.16
KNTC1-211ENST00000541427 PTK7Q13308 1070 aa7.78□□□□□ -1.16
KNTC1-211ENST00000541427 TPCN2Q8NHX9 752 aa7.78□□□□□ -1.16
KNTC1-211ENST00000541427 ZNF594Q96JF6 807 aaPredicted RBP7.78□□□□□ -1.16
KNTC1-211ENST00000541427 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
KNTC1-211ENST00000541427 FAM196BA6NMK8 535 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 C9orf172C9J069 976 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L15C9J2P7 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L10C9JJH3 530 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms