RNA–Protein interactions for RNA: ENST00000541288.5

AC087258.1-201, humanhuman

TSL 3

Gene AC087258.1, Length 641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087258.1-201ENST00000541288 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
AC087258.1-201ENST00000541288 NUP98P52948 1817 aa16.84■□□□□ 0.29
AC087258.1-201ENST00000541288 ZNF853P0CG23 659 aa16.83■□□□□ 0.28
AC087258.1-201ENST00000541288 HDGFL1Q5TGJ6 251 aa16.83■□□□□ 0.28
AC087258.1-201ENST00000541288 SETDB2Q96T68 719 aa16.83■□□□□ 0.28
AC087258.1-201ENST00000541288 CHPF2Q9P2E5 772 aa16.83■□□□□ 0.28
AC087258.1-201ENST00000541288 NRXN2Q9P2S2 1712 aa16.82■□□□□ 0.28
AC087258.1-201ENST00000541288 PDIA6Q15084 440 aa16.82■□□□□ 0.28
AC087258.1-201ENST00000541288 DIEXFQ68CQ4 756 aaKnown RBP16.82■□□□□ 0.28
AC087258.1-201ENST00000541288 ZNF428Q96B54 188 aa16.82■□□□□ 0.28
AC087258.1-201ENST00000541288 NIP7Q9Y221 180 aaKnown RBP eCLIP16.82■□□□□ 0.28
AC087258.1-201ENST00000541288 BCS1LQ9Y276 419 aa16.82■□□□□ 0.28
AC087258.1-201ENST00000541288 ZNF652Q9Y2D9 606 aa16.82■□□□□ 0.28
AC087258.1-201ENST00000541288 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
AC087258.1-201ENST00000541288 GPTP24298 496 aa16.81■□□□□ 0.28
AC087258.1-201ENST00000541288 YY1P25490 414 aa16.81■□□□□ 0.28
AC087258.1-201ENST00000541288 C8orf58Q8NAV2 365 aa16.81■□□□□ 0.28
AC087258.1-201ENST00000541288 ANKRD31Q8N7Z5 1873 aa16.81■□□□□ 0.28
AC087258.1-201ENST00000541288 CHD4Q14839 1912 aa16.8■□□□□ 0.28
AC087258.1-201ENST00000541288 MAP3K15Q6ZN16 1313 aa16.8■□□□□ 0.28
AC087258.1-201ENST00000541288 TGFB2P61812 414 aa16.8■□□□□ 0.28
AC087258.1-201ENST00000541288 PRR5LQ6MZQ0 368 aa16.8■□□□□ 0.28
AC087258.1-201ENST00000541288 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
AC087258.1-201ENST00000541288 CNBD1Q8NA66 436 aa16.8■□□□□ 0.28
AC087258.1-201ENST00000541288 XAGE3Q8WTP9 111 aa16.8■□□□□ 0.28
AC087258.1-201ENST00000541288 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
AC087258.1-201ENST00000541288 ERBB4Q15303 1308 aa16.79■□□□□ 0.28
AC087258.1-201ENST00000541288 CCDC27Q2M243 656 aa16.79■□□□□ 0.28
AC087258.1-201ENST00000541288 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
AC087258.1-201ENST00000541288 C2CD5Q86YS7 1000 aa16.79■□□□□ 0.28
AC087258.1-201ENST00000541288 TSPYL6Q8N831 410 aa16.79■□□□□ 0.28
AC087258.1-201ENST00000541288 CACNA1SQ13698 1873 aa16.79■□□□□ 0.28
AC087258.1-201ENST00000541288 MIER1Q8N108 512 aa16.78■□□□□ 0.28
AC087258.1-201ENST00000541288 COL11A2P13942 1736 aaPredicted RBP16.77■□□□□ 0.28
AC087258.1-201ENST00000541288 KCNA3P22001 575 aa16.77■□□□□ 0.28
AC087258.1-201ENST00000541288 CLEC4GQ6UXB4 293 aa16.77■□□□□ 0.28
AC087258.1-201ENST00000541288 LRP10Q7Z4F1 713 aa16.77■□□□□ 0.28
AC087258.1-201ENST00000541288 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.28
AC087258.1-201ENST00000541288 GRIN3BO60391 1043 aa16.76■□□□□ 0.27
AC087258.1-201ENST00000541288 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
AC087258.1-201ENST00000541288 ST5P78524 1137 aa16.76■□□□□ 0.27
AC087258.1-201ENST00000541288 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
AC087258.1-201ENST00000541288 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
AC087258.1-201ENST00000541288 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
AC087258.1-201ENST00000541288 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
AC087258.1-201ENST00000541288 ERVV-1B6SEH8 477 aa16.75■□□□□ 0.27
AC087258.1-201ENST00000541288 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
AC087258.1-201ENST00000541288 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
AC087258.1-201ENST00000541288 DBF4Q9UBU7 674 aaPredicted RBP16.75■□□□□ 0.27
AC087258.1-201ENST00000541288 ANKRD36CQ5JPF3 1778 aa16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 H0YIN7 160 aa16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 CCER2I3L3R5 266 aa16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 HOXB7P09629 217 aa16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 PHAXQ9H814 394 aaKnown RBP16.74■□□□□ 0.27
AC087258.1-201ENST00000541288 TWISTNBQ3B726 338 aaPredicted RBP16.73■□□□□ 0.27
AC087258.1-201ENST00000541288 SUSD4Q5VX71 490 aa16.73■□□□□ 0.27
AC087258.1-201ENST00000541288 TPTE2Q6XPS3 522 aa16.73■□□□□ 0.27
AC087258.1-201ENST00000541288 GIGYF2Q6Y7W6 1299 aaKnown RBP16.73■□□□□ 0.27
AC087258.1-201ENST00000541288 ARFGEF1Q9Y6D6 1849 aa16.73■□□□□ 0.27
AC087258.1-201ENST00000541288 IL16Q14005 1332 aa16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 TNRC6CQ9HCJ0 1690 aaKnown RBP16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 PDE6BP35913 854 aa16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 EXOSC9Q06265 439 aaKnown RBP16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 ERFEQ4G0M1 354 aa16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 WDR63Q8IWG1 891 aa16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 BRIP1Q9BX63 1249 aa16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
AC087258.1-201ENST00000541288 ATP10DQ9P241 1426 aa16.71■□□□□ 0.27
AC087258.1-201ENST00000541288 ZNF34Q8IZ26 560 aa16.71■□□□□ 0.27
AC087258.1-201ENST00000541288 HYPKQ9NX55 129 aa16.71■□□□□ 0.27
AC087258.1-201ENST00000541288 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
AC087258.1-201ENST00000541288 GOLGA2Q08379 1002 aa16.7■□□□□ 0.26
AC087258.1-201ENST00000541288 CCDC30Q5VVM6 783 aa16.7■□□□□ 0.26
AC087258.1-201ENST00000541288 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
AC087258.1-201ENST00000541288 TTLL6Q8N841 843 aa16.69■□□□□ 0.26
AC087258.1-201ENST00000541288 PLBD2Q8NHP8 589 aa16.69■□□□□ 0.26
AC087258.1-201ENST00000541288 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
AC087258.1-201ENST00000541288 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 RGL2O15211 777 aa16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 NTSR2O95665 410 aa16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 RTL5Q5HYW3 569 aaPredicted RBP16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 MYH16Q9H6N6 1097 aa16.68■□□□□ 0.26
AC087258.1-201ENST00000541288 HSP90AB3PQ58FF7 597 aa16.67■□□□□ 0.26
AC087258.1-201ENST00000541288 G2E3Q7L622 706 aa16.67■□□□□ 0.26
AC087258.1-201ENST00000541288 PPP1R42Q7Z4L9 355 aa16.67■□□□□ 0.26
AC087258.1-201ENST00000541288 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
AC087258.1-201ENST00000541288 ZNF526Q8TF50 670 aaPredicted RBP16.67■□□□□ 0.26
AC087258.1-201ENST00000541288 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
AC087258.1-201ENST00000541288 C21orf2O43822 256 aa16.66■□□□□ 0.26
AC087258.1-201ENST00000541288 SRGNP10124 158 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms