RNA–Protein interactions for RNA: ENST00000541233.1

CD27-202, Transcript of CD27 molecule, humanhuman

TSL 2

Gene CD27, Length 1,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD27-202ENST00000541233 NPHP1O15259 732 aa17.04■□□□□ 0.32
CD27-202ENST00000541233 RASSF7Q02833 373 aa17.04■□□□□ 0.32
CD27-202ENST00000541233 STYK1Q6J9G0 422 aa17.04■□□□□ 0.32
CD27-202ENST00000541233 NMRK2Q9NPI5 230 aa17.04■□□□□ 0.32
CD27-202ENST00000541233 ERBB4Q15303 1308 aa17.03■□□□□ 0.32
CD27-202ENST00000541233 SRGNP10124 158 aa17.03■□□□□ 0.32
CD27-202ENST00000541233 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
CD27-202ENST00000541233 DDX10Q13206 875 aaKnown RBP17.03■□□□□ 0.32
CD27-202ENST00000541233 NBPF5PQ86XG9 351 aaPredicted RBP17.03■□□□□ 0.32
CD27-202ENST00000541233 CNKSR1Q969H4 720 aa17.03■□□□□ 0.32
CD27-202ENST00000541233 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
CD27-202ENST00000541233 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
CD27-202ENST00000541233 LTBP3Q9NS15 1303 aa17.02■□□□□ 0.32
CD27-202ENST00000541233 TIAM2Q8IVF5 1701 aa17.02■□□□□ 0.32
CD27-202ENST00000541233 FER1L6Q2WGJ9 1857 aa17.02■□□□□ 0.32
CD27-202ENST00000541233 ERVV-1B6SEH8 477 aa17.02■□□□□ 0.32
CD27-202ENST00000541233 NFKBIEO00221 500 aa17.02■□□□□ 0.32
CD27-202ENST00000541233 ZNF622Q969S3 477 aaKnown RBP eCLIP17.02■□□□□ 0.32
CD27-202ENST00000541233 MASTLQ96GX5 879 aa17.02■□□□□ 0.32
CD27-202ENST00000541233 KLRG2A4D1S0 409 aaPredicted RBP17.01■□□□□ 0.31
CD27-202ENST00000541233 TPTE2Q6XPS3 522 aa17.01■□□□□ 0.31
CD27-202ENST00000541233 CCDC24Q8N4L8 307 aa17.01■□□□□ 0.31
CD27-202ENST00000541233 RBM46Q8TBY0 533 aaKnown RBP17.01■□□□□ 0.31
CD27-202ENST00000541233 NIP7Q9Y221 180 aaKnown RBP eCLIP17.01■□□□□ 0.31
CD27-202ENST00000541233 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
CD27-202ENST00000541233 PRELPP51888 382 aa17■□□□□ 0.31
CD27-202ENST00000541233 RIPK4P57078 832 aa17■□□□□ 0.31
CD27-202ENST00000541233 SOGA3Q5TF21 947 aa17■□□□□ 0.31
CD27-202ENST00000541233 IBTKQ9P2D0 1353 aaPredicted RBP17■□□□□ 0.31
CD27-202ENST00000541233 MAP3K15Q6ZN16 1313 aa16.99■□□□□ 0.31
CD27-202ENST00000541233 RIC1Q4ADV7 1423 aa16.99■□□□□ 0.31
CD27-202ENST00000541233 HLFQ16534 295 aa16.99■□□□□ 0.31
CD27-202ENST00000541233 PRPF40BQ6NWY9 871 aaKnown RBP16.99■□□□□ 0.31
CD27-202ENST00000541233 TSPYL4Q9UJ04 414 aa16.99■□□□□ 0.31
CD27-202ENST00000541233 GLTPD2A6NH11 291 aa16.98■□□□□ 0.31
CD27-202ENST00000541233 C21orf2O43822 256 aa16.98■□□□□ 0.31
CD27-202ENST00000541233 NPR1P16066 1061 aa16.98■□□□□ 0.31
CD27-202ENST00000541233 C16orf71Q8IYS4 520 aaPredicted RBP16.98■□□□□ 0.31
CD27-202ENST00000541233 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
CD27-202ENST00000541233 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
CD27-202ENST00000541233 APLP1P51693 650 aa16.97■□□□□ 0.31
CD27-202ENST00000541233 FSTL1Q12841 308 aa16.97■□□□□ 0.31
CD27-202ENST00000541233 KIF6Q6ZMV9 814 aa16.97■□□□□ 0.31
CD27-202ENST00000541233 NYXQ9GZU5 481 aa16.97■□□□□ 0.31
CD27-202ENST00000541233 TAOK3Q9H2K8 898 aa16.97■□□□□ 0.31
CD27-202ENST00000541233 NUP98P52948 1817 aa16.97■□□□□ 0.31
CD27-202ENST00000541233 CCDC88AQ3V6T2 1871 aa16.97■□□□□ 0.31
CD27-202ENST00000541233 RUNDC1Q96C34 613 aa16.96■□□□□ 0.31
CD27-202ENST00000541233 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
CD27-202ENST00000541233 CACNA1SQ13698 1873 aa16.96■□□□□ 0.31
CD27-202ENST00000541233 WDR43Q15061 677 aaKnown RBP eCLIP16.95■□□□□ 0.3
CD27-202ENST00000541233 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
CD27-202ENST00000541233 C7orf43Q8WVR3 580 aa16.95■□□□□ 0.3
CD27-202ENST00000541233 RRAGCQ9HB90 399 aa16.95■□□□□ 0.3
CD27-202ENST00000541233 WDR90Q96KV7 1748 aa16.94■□□□□ 0.3
CD27-202ENST00000541233 MYL6BP14649 208 aa16.94■□□□□ 0.3
CD27-202ENST00000541233 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
CD27-202ENST00000541233 TTLL7Q6ZT98 887 aa16.94■□□□□ 0.3
CD27-202ENST00000541233 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
CD27-202ENST00000541233 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
CD27-202ENST00000541233 VEGFAP15692 232 aaPredicted RBP16.93■□□□□ 0.3
CD27-202ENST00000541233 ERFEQ4G0M1 354 aa16.93■□□□□ 0.3
CD27-202ENST00000541233 CCDC93Q567U6 631 aa16.93■□□□□ 0.3
CD27-202ENST00000541233 GIGYF2Q6Y7W6 1299 aaKnown RBP16.93■□□□□ 0.3
CD27-202ENST00000541233 NGEFQ8N5V2 710 aa16.93■□□□□ 0.3
CD27-202ENST00000541233 UBN2Q6ZU65 1347 aa16.93■□□□□ 0.3
CD27-202ENST00000541233 CHL1O00533 1208 aa16.92■□□□□ 0.3
CD27-202ENST00000541233 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
CD27-202ENST00000541233 ALDH1B1P30837 517 aa16.92■□□□□ 0.3
CD27-202ENST00000541233 PDIA6Q15084 440 aa16.92■□□□□ 0.3
CD27-202ENST00000541233 DPY19L2Q6NUT2 758 aa16.92■□□□□ 0.3
CD27-202ENST00000541233 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
CD27-202ENST00000541233 ZNF34Q8IZ26 560 aa16.92■□□□□ 0.3
CD27-202ENST00000541233 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
CD27-202ENST00000541233 FAM177BA6PVY3 158 aa16.91■□□□□ 0.3
CD27-202ENST00000541233 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
CD27-202ENST00000541233 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
CD27-202ENST00000541233 ZBTB3Q9H5J0 574 aa16.91■□□□□ 0.3
CD27-202ENST00000541233 ADAMTS8Q9UP79 889 aa16.91■□□□□ 0.3
CD27-202ENST00000541233 TRIM35Q9UPQ4 493 aa16.91■□□□□ 0.3
CD27-202ENST00000541233 HOXB7P09629 217 aa16.9■□□□□ 0.3
CD27-202ENST00000541233 FKBP4Q02790 459 aaKnown RBP eCLIP16.9■□□□□ 0.3
CD27-202ENST00000541233 RNF123Q5XPI4 1314 aa16.9■□□□□ 0.3
CD27-202ENST00000541233 SNED1Q8TER0 1413 aa16.89■□□□□ 0.29
CD27-202ENST00000541233 NTSR2O95665 410 aa16.89■□□□□ 0.29
CD27-202ENST00000541233 EIF2S2P20042 333 aaKnown RBP16.89■□□□□ 0.29
CD27-202ENST00000541233 PPP1R42Q7Z4L9 355 aa16.89■□□□□ 0.29
CD27-202ENST00000541233 NUTM1Q86Y26 1132 aa16.89■□□□□ 0.29
CD27-202ENST00000541233 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
CD27-202ENST00000541233 GPTP24298 496 aa16.88■□□□□ 0.29
CD27-202ENST00000541233 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
CD27-202ENST00000541233 NEUROD2Q15784 382 aa16.88■□□□□ 0.29
CD27-202ENST00000541233 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
CD27-202ENST00000541233 SUSD4Q5VX71 490 aa16.88■□□□□ 0.29
CD27-202ENST00000541233 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
CD27-202ENST00000541233 POTECB2RU33 542 aa16.87■□□□□ 0.29
CD27-202ENST00000541233 HSP90AB3PQ58FF7 597 aa16.87■□□□□ 0.29
CD27-202ENST00000541233 CC2D2BQ6DHV5 1058 aa16.87■□□□□ 0.29
CD27-202ENST00000541233 DDX21Q9NR30 783 aaKnown RBP eCLIP16.87■□□□□ 0.29
CD27-202ENST00000541233 GRIPAP1Q4V328 841 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms