RNA–Protein interactions for RNA: ENST00000541030.5

STRC-213, Transcript of stereocilin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STRC, Length 5,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-213ENST00000541030 TTF1Q15361 905 aaPredicted RBP14.37□□□□□ -0.11
STRC-213ENST00000541030 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
STRC-213ENST00000541030 CATIPQ7Z7H3 387 aa14.37□□□□□ -0.11
STRC-213ENST00000541030 HOOK3Q86VS8 718 aa14.37□□□□□ -0.11
STRC-213ENST00000541030 TBC1D32Q96NH3 1257 aa14.37□□□□□ -0.11
STRC-213ENST00000541030 CFAP57Q96MR6 1250 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 LRRC27Q9C0I9 530 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 EHMT1Q9H9B1 1298 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 TUBB4AP04350 444 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 TBC1D9Q6ZT07 1266 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 TRIM27P14373 513 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 POGZQ7Z3K3 1410 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 SYNJ1O43426 1573 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 IFIT3O14879 490 aaKnown RBP14.36□□□□□ -0.11
STRC-213ENST00000541030 NLRP5P59047 1200 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 SLF2Q8IX21 1173 aa14.36□□□□□ -0.11
STRC-213ENST00000541030 THUMPD2Q9BTF0 503 aaKnown RBP14.36□□□□□ -0.11
STRC-213ENST00000541030 MTIF2P46199 727 aaKnown RBP14.35□□□□□ -0.11
STRC-213ENST00000541030 ZNF444Q8N0Y2 327 aaPredicted RBP14.35□□□□□ -0.11
STRC-213ENST00000541030 CUL5Q93034 780 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 TRMT1Q9NXH9 659 aaKnown RBP14.35□□□□□ -0.11
STRC-213ENST00000541030 HMGXB3Q12766 1538 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 SPECC1Q5M775 1068 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 TCP11L1Q9NUJ3 509 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 CALML4Q96GE6 196 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 GOLIM4O00461 696 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 CEP135Q66GS9 1140 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 CCDC102BQ68D86 513 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 GOPCQ9HD26 462 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
STRC-213ENST00000541030 MIS18AQ9NYP9 233 aa14.35□□□□□ -0.11
STRC-213ENST00000541030 KIF5BP33176 963 aa14.34□□□□□ -0.11
STRC-213ENST00000541030 IARSP41252 1262 aaKnown RBP14.34□□□□□ -0.11
STRC-213ENST00000541030 IFI16Q16666 785 aaKnown RBP14.34□□□□□ -0.11
STRC-213ENST00000541030 LRSAM1Q6UWE0 723 aa14.34□□□□□ -0.11
STRC-213ENST00000541030 STXBP4Q6ZWJ1 553 aa14.34□□□□□ -0.11
STRC-213ENST00000541030 RNF187Q5TA31 235 aaPredicted RBP14.34□□□□□ -0.11
STRC-213ENST00000541030 TTC22Q5TAA0 569 aa14.34□□□□□ -0.11
STRC-213ENST00000541030 DZIP1Q86YF9 867 aaKnown RBP14.34□□□□□ -0.11
STRC-213ENST00000541030 GUCY1B3Q02153 619 aa14.34□□□□□ -0.11
STRC-213ENST00000541030 CRACR2BQ8N4Y2 399 aaPredicted RBP14.34□□□□□ -0.11
STRC-213ENST00000541030 CCDC8Q9H0W5 538 aaPredicted RBP14.34□□□□□ -0.11
STRC-213ENST00000541030 NESP48681 1621 aa14.34□□□□□ -0.11
STRC-213ENST00000541030 RANBP6O60518 1105 aaKnown RBP14.34□□□□□ -0.11
STRC-213ENST00000541030 CPLX3Q8WVH0 158 aa14.34□□□□□ -0.11
STRC-213ENST00000541030 TMOD3Q9NYL9 352 aa14.34□□□□□ -0.11
STRC-213ENST00000541030 CCDC85AQ96PX6 553 aaPredicted RBP14.33□□□□□ -0.12
STRC-213ENST00000541030 RMND1Q9NWS8 449 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 TTC21BQ7Z4L5 1316 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 BMP15O95972 392 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 CKAP4Q07065 602 aaKnown RBP14.33□□□□□ -0.12
STRC-213ENST00000541030 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.33□□□□□ -0.12
STRC-213ENST00000541030 FLIIQ13045 1269 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 HLTFQ14527 1009 aaKnown RBP eCLIP14.33□□□□□ -0.12
STRC-213ENST00000541030 USP16Q9Y5T5 823 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 ARHGAP45Q92619 1136 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
STRC-213ENST00000541030 HDAC1Q13547 482 aaPredicted RBP14.32□□□□□ -0.12
STRC-213ENST00000541030 ZSCAN23Q3MJ62 389 aa14.32□□□□□ -0.12
STRC-213ENST00000541030 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
STRC-213ENST00000541030 CTAGE1Q96RT6 745 aa14.32□□□□□ -0.12
STRC-213ENST00000541030 UBA5Q9GZZ9 404 aa14.32□□□□□ -0.12
STRC-213ENST00000541030 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.12
STRC-213ENST00000541030 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.32□□□□□ -0.12
STRC-213ENST00000541030 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
STRC-213ENST00000541030 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
STRC-213ENST00000541030 DCAF8L1A6NGE4 600 aa14.32□□□□□ -0.12
STRC-213ENST00000541030 CCDC40Q4G0X9 1142 aa14.32□□□□□ -0.12
STRC-213ENST00000541030 BCCIPQ9P287 314 aaKnown RBP eCLIP14.32□□□□□ -0.12
STRC-213ENST00000541030 ZSCAN22P10073 491 aaPredicted RBP14.31□□□□□ -0.12
STRC-213ENST00000541030 GTF2F1P35269 517 aaKnown RBP eCLIP14.31□□□□□ -0.12
STRC-213ENST00000541030 ORC3Q9UBD5 711 aaPredicted RBP14.31□□□□□ -0.12
STRC-213ENST00000541030 TTC21AQ8NDW8 1320 aa14.31□□□□□ -0.12
STRC-213ENST00000541030 CCDC172P0C7W6 258 aa14.31□□□□□ -0.12
STRC-213ENST00000541030 NCOA7Q8NI08 942 aa14.31□□□□□ -0.12
STRC-213ENST00000541030 PRDM10Q9NQV6 1147 aa14.31□□□□□ -0.12
STRC-213ENST00000541030 CCT2P78371 535 aaKnown RBP14.31□□□□□ -0.12
STRC-213ENST00000541030 CEP112Q8N8E3 955 aa14.31□□□□□ -0.12
STRC-213ENST00000541030 CTNNBL1Q8WYA6 563 aaPredicted RBP14.31□□□□□ -0.12
STRC-213ENST00000541030 PIK3R4Q99570 1358 aa14.31□□□□□ -0.12
STRC-213ENST00000541030 F6X3S4 739 aa14.31□□□□□ -0.12
STRC-213ENST00000541030 SF3B2Q13435 895 aaKnown RBP14.31□□□□□ -0.12
STRC-213ENST00000541030 TFIP11Q9UBB9 837 aaKnown RBP14.31□□□□□ -0.12
STRC-213ENST00000541030 GNG11P61952 73 aa14.3□□□□□ -0.12
STRC-213ENST00000541030 KRT222Q8N1A0 295 aa14.3□□□□□ -0.12
STRC-213ENST00000541030 EPRSP07814 1512 aaKnown RBP14.3□□□□□ -0.12
STRC-213ENST00000541030 SPAG1Q07617 926 aa14.3□□□□□ -0.12
STRC-213ENST00000541030 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
STRC-213ENST00000541030 TMCO5BA8MYB1 307 aa14.3□□□□□ -0.12
STRC-213ENST00000541030 UBA7P41226 1012 aa14.3□□□□□ -0.12
STRC-213ENST00000541030 TUBB4BP68371 445 aa14.3□□□□□ -0.12
STRC-213ENST00000541030 SRRTQ9BXP5 876 aaKnown RBP14.3□□□□□ -0.12
STRC-213ENST00000541030 FSD2A1L4K1 749 aa14.3□□□□□ -0.12
STRC-213ENST00000541030 TMEM67Q5HYA8 995 aa14.3□□□□□ -0.12
STRC-213ENST00000541030 METAP2P50579 478 aaKnown RBP eCLIP14.29□□□□□ -0.12
STRC-213ENST00000541030 CCDC96Q2M329 555 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms