RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SERPINB2P05120 415 aa17.06■□□□□ 0.32
LTBR-208ENST00000541005 KRT24Q2M2I5 525 aa17.06■□□□□ 0.32
LTBR-208ENST00000541005 UTRNP46939 3433 aa17.05■□□□□ 0.32
LTBR-208ENST00000541005 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
LTBR-208ENST00000541005 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
LTBR-208ENST00000541005 GRIN3BO60391 1043 aa17.04■□□□□ 0.32
LTBR-208ENST00000541005 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
LTBR-208ENST00000541005 BICDL1Q6ZP65 573 aa17.04■□□□□ 0.32
LTBR-208ENST00000541005 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
LTBR-208ENST00000541005 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
LTBR-208ENST00000541005 MYL6BP14649 208 aa17.03■□□□□ 0.32
LTBR-208ENST00000541005 DPEP1P16444 411 aa17.03■□□□□ 0.32
LTBR-208ENST00000541005 KCNA3P22001 575 aa17.03■□□□□ 0.32
LTBR-208ENST00000541005 PROSER3Q2NL68 480 aa17.03■□□□□ 0.32
LTBR-208ENST00000541005 DUSP27Q5VZP5 1158 aa17.03■□□□□ 0.32
LTBR-208ENST00000541005 KIF6Q6ZMV9 814 aa17.03■□□□□ 0.32
LTBR-208ENST00000541005 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
LTBR-208ENST00000541005 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
LTBR-208ENST00000541005 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.32
LTBR-208ENST00000541005 SBF1O95248 1867 aa17.02■□□□□ 0.32
LTBR-208ENST00000541005 A0A0G2JLW4 131 aa17.02■□□□□ 0.32
LTBR-208ENST00000541005 HLFQ16534 295 aa17.02■□□□□ 0.32
LTBR-208ENST00000541005 HDGFL1Q5TGJ6 251 aa17.02■□□□□ 0.32
LTBR-208ENST00000541005 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
LTBR-208ENST00000541005 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
LTBR-208ENST00000541005 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
LTBR-208ENST00000541005 TNRC6CQ9HCJ0 1690 aaKnown RBP17.01■□□□□ 0.31
LTBR-208ENST00000541005 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
LTBR-208ENST00000541005 CNBD1Q8NA66 436 aa17.01■□□□□ 0.31
LTBR-208ENST00000541005 BRIP1Q9BX63 1249 aa17■□□□□ 0.31
LTBR-208ENST00000541005 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
LTBR-208ENST00000541005 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
LTBR-208ENST00000541005 NIP7Q9Y221 180 aaKnown RBP eCLIP17■□□□□ 0.31
LTBR-208ENST00000541005 ANXA1P04083 346 aa16.99■□□□□ 0.31
LTBR-208ENST00000541005 GIGYF2Q6Y7W6 1299 aaKnown RBP16.99■□□□□ 0.31
LTBR-208ENST00000541005 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
LTBR-208ENST00000541005 LAMB2P55268 1798 aa16.99■□□□□ 0.31
LTBR-208ENST00000541005 CCDC88AQ3V6T2 1871 aa16.99■□□□□ 0.31
LTBR-208ENST00000541005 RIC1Q4ADV7 1423 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 CHRNA5P30532 468 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 NBPF5PQ86XG9 351 aaPredicted RBP16.98■□□□□ 0.31
LTBR-208ENST00000541005 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 NECTIN2Q92692 538 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 ZBTB3Q9H5J0 574 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 PIM2Q9P1W9 311 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 FER1L6Q2WGJ9 1857 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
LTBR-208ENST00000541005 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
LTBR-208ENST00000541005 YY1P25490 414 aa16.97■□□□□ 0.31
LTBR-208ENST00000541005 PDE6BP35913 854 aa16.97■□□□□ 0.31
LTBR-208ENST00000541005 ST5P78524 1137 aa16.97■□□□□ 0.31
LTBR-208ENST00000541005 ZNF34Q8IZ26 560 aa16.97■□□□□ 0.31
LTBR-208ENST00000541005 XAGE3Q8WTP9 111 aa16.97■□□□□ 0.31
LTBR-208ENST00000541005 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
LTBR-208ENST00000541005 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
LTBR-208ENST00000541005 HYPKQ9NX55 129 aa16.97■□□□□ 0.31
LTBR-208ENST00000541005 UBN2Q6ZU65 1347 aa16.96■□□□□ 0.31
LTBR-208ENST00000541005 FANCIQ9NVI1 1328 aa16.96■□□□□ 0.31
LTBR-208ENST00000541005 TPTE2Q6XPS3 522 aa16.96■□□□□ 0.31
LTBR-208ENST00000541005 COPS6Q7L5N1 327 aa16.96■□□□□ 0.31
LTBR-208ENST00000541005 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
LTBR-208ENST00000541005 BCS1LQ9Y276 419 aa16.96■□□□□ 0.31
LTBR-208ENST00000541005 DICER1Q9UPY3 1922 aaKnown RBP16.96■□□□□ 0.3
LTBR-208ENST00000541005 DALRD3Q5D0E6 543 aaKnown RBP16.95■□□□□ 0.3
LTBR-208ENST00000541005 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
LTBR-208ENST00000541005 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
LTBR-208ENST00000541005 NYXQ9GZU5 481 aa16.95■□□□□ 0.3
LTBR-208ENST00000541005 DDX60Q8IY21 1712 aaKnown RBP16.95■□□□□ 0.3
LTBR-208ENST00000541005 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
LTBR-208ENST00000541005 H0YIN7 160 aa16.94■□□□□ 0.3
LTBR-208ENST00000541005 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
LTBR-208ENST00000541005 HSP90AB3PQ58FF7 597 aa16.94■□□□□ 0.3
LTBR-208ENST00000541005 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
LTBR-208ENST00000541005 ADCY9O60503 1353 aa16.93■□□□□ 0.3
LTBR-208ENST00000541005 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
LTBR-208ENST00000541005 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
LTBR-208ENST00000541005 NPHP1O15259 732 aa16.93■□□□□ 0.3
LTBR-208ENST00000541005 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
LTBR-208ENST00000541005 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
LTBR-208ENST00000541005 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
LTBR-208ENST00000541005 RNF123Q5XPI4 1314 aa16.93■□□□□ 0.3
LTBR-208ENST00000541005 NTSR2O95665 410 aa16.92■□□□□ 0.3
LTBR-208ENST00000541005 SRGNP10124 158 aa16.92■□□□□ 0.3
LTBR-208ENST00000541005 GPTP24298 496 aa16.92■□□□□ 0.3
LTBR-208ENST00000541005 AIMP1Q12904 312 aaKnown RBP16.92■□□□□ 0.3
LTBR-208ENST00000541005 TWISTNBQ3B726 338 aaPredicted RBP16.92■□□□□ 0.3
LTBR-208ENST00000541005 STYK1Q6J9G0 422 aa16.92■□□□□ 0.3
LTBR-208ENST00000541005 CCDC24Q8N4L8 307 aa16.92■□□□□ 0.3
LTBR-208ENST00000541005 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
LTBR-208ENST00000541005 TCIRG1Q13488 830 aa16.91■□□□□ 0.3
LTBR-208ENST00000541005 SUSD4Q5VX71 490 aa16.91■□□□□ 0.3
LTBR-208ENST00000541005 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
LTBR-208ENST00000541005 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
LTBR-208ENST00000541005 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
LTBR-208ENST00000541005 MYH3P11055 1940 aa16.9■□□□□ 0.3
LTBR-208ENST00000541005 GOLGA2Q08379 1002 aa16.9■□□□□ 0.3
LTBR-208ENST00000541005 PPP1R42Q7Z4L9 355 aa16.9■□□□□ 0.3
LTBR-208ENST00000541005 MASTLQ96GX5 879 aa16.9■□□□□ 0.3
LTBR-208ENST00000541005 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms