RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 ERBB4Q15303 1308 aa19.44■□□□□ 0.7
DDX11-217ENST00000540935 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
DDX11-217ENST00000540935 ERVV-1B6SEH8 477 aa19.42■□□□□ 0.7
DDX11-217ENST00000540935 TPTE2Q6XPS3 522 aa19.42■□□□□ 0.7
DDX11-217ENST00000540935 ZNF622Q969S3 477 aaKnown RBP eCLIP19.42■□□□□ 0.73e-6■■□□□ 12.7
DDX11-217ENST00000540935 RNF181Q9P0P0 153 aa19.42■□□□□ 0.7
DDX11-217ENST00000540935 NIP7Q9Y221 180 aaKnown RBP eCLIP19.42■□□□□ 0.7
DDX11-217ENST00000540935 KIF6Q6ZMV9 814 aa19.41■□□□□ 0.7
DDX11-217ENST00000540935 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
DDX11-217ENST00000540935 CNKSR1Q969H4 720 aa19.41■□□□□ 0.7
DDX11-217ENST00000540935 ZC3H4Q9UPT8 1303 aaKnown RBP19.41■□□□□ 0.7
DDX11-217ENST00000540935 SBF1O95248 1867 aa19.41■□□□□ 0.7
DDX11-217ENST00000540935 KIF3CO14782 793 aa19.4■□□□□ 0.7
DDX11-217ENST00000540935 STYK1Q6J9G0 422 aa19.4■□□□□ 0.7
DDX11-217ENST00000540935 CCDC24Q8N4L8 307 aa19.4■□□□□ 0.7
DDX11-217ENST00000540935 ADAMTS8Q9UP79 889 aa19.4■□□□□ 0.7
DDX11-217ENST00000540935 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
DDX11-217ENST00000540935 SRGNP10124 158 aa19.39■□□□□ 0.69
DDX11-217ENST00000540935 LMNB1P20700 586 aa19.39■□□□□ 0.69
DDX11-217ENST00000540935 NEUROD2Q15784 382 aa19.39■□□□□ 0.69
DDX11-217ENST00000540935 NGEFQ8N5V2 710 aa19.39■□□□□ 0.69
DDX11-217ENST00000540935 MASTLQ96GX5 879 aa19.39■□□□□ 0.69
DDX11-217ENST00000540935 MAP3K15Q6ZN16 1313 aa19.39■□□□□ 0.69
DDX11-217ENST00000540935 COL11A2P13942 1736 aaPredicted RBP19.39■□□□□ 0.69
DDX11-217ENST00000540935 MYL6BP14649 208 aa19.38■□□□□ 0.69
DDX11-217ENST00000540935 HLFQ16534 295 aa19.38■□□□□ 0.69
DDX11-217ENST00000540935 KDM2BQ8NHM5 1336 aa19.38■□□□□ 0.69
DDX11-217ENST00000540935 RASSF7Q02833 373 aa19.37■□□□□ 0.69
DDX11-217ENST00000540935 SOGA3Q5TF21 947 aa19.37■□□□□ 0.69
DDX11-217ENST00000540935 NYXQ9GZU5 481 aa19.37■□□□□ 0.69
DDX11-217ENST00000540935 KLRG2A4D1S0 409 aaPredicted RBP19.36■□□□□ 0.69
DDX11-217ENST00000540935 GTF2E1P29083 439 aaPredicted RBP19.36■□□□□ 0.69
DDX11-217ENST00000540935 TRIM35Q9UPQ4 493 aa19.36■□□□□ 0.69
DDX11-217ENST00000540935 NUP98P52948 1817 aa19.35■□□□□ 0.69
DDX11-217ENST00000540935 CHL1O00533 1208 aa19.35■□□□□ 0.69
DDX11-217ENST00000540935 C21orf2O43822 256 aa19.35■□□□□ 0.69
DDX11-217ENST00000540935 TOMM70O94826 608 aa19.35■□□□□ 0.69
DDX11-217ENST00000540935 NPR1P16066 1061 aa19.35■□□□□ 0.69
DDX11-217ENST00000540935 EIF2S2P20042 333 aaKnown RBP19.35■□□□□ 0.69
DDX11-217ENST00000540935 TTLL7Q6ZT98 887 aa19.35■□□□□ 0.69
DDX11-217ENST00000540935 ARFGEF2Q9Y6D5 1785 aa19.34■□□□□ 0.69
DDX11-217ENST00000540935 IBTKQ9P2D0 1353 aaPredicted RBP19.34■□□□□ 0.69
DDX11-217ENST00000540935 NFKBIEO00221 500 aa19.34■□□□□ 0.69
DDX11-217ENST00000540935 PRPF40BQ6NWY9 871 aaKnown RBP19.34■□□□□ 0.69
DDX11-217ENST00000540935 NMRK2Q9NPI5 230 aa19.34■□□□□ 0.69
DDX11-217ENST00000540935 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.69
DDX11-217ENST00000540935 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
DDX11-217ENST00000540935 GIGYF2Q6Y7W6 1299 aaKnown RBP19.33■□□□□ 0.68
DDX11-217ENST00000540935 ZBTB3Q9H5J0 574 aa19.33■□□□□ 0.68
DDX11-217ENST00000540935 FER1L6Q2WGJ9 1857 aa19.33■□□□□ 0.68
DDX11-217ENST00000540935 HSPA6P17066 643 aa19.32■□□□□ 0.68
DDX11-217ENST00000540935 PDIA6Q15084 440 aa19.32■□□□□ 0.68
DDX11-217ENST00000540935 LRP10Q7Z4F1 713 aa19.32■□□□□ 0.68
DDX11-217ENST00000540935 TAOK3Q9H2K8 898 aa19.32■□□□□ 0.68
DDX11-217ENST00000540935 LAS1LQ9Y4W2 734 aaKnown RBP19.32■□□□□ 0.68
DDX11-217ENST00000540935 SLX4Q8IY92 1834 aa19.32■□□□□ 0.68
DDX11-217ENST00000540935 TNRC6CQ9HCJ0 1690 aaKnown RBP19.31■□□□□ 0.68
DDX11-217ENST00000540935 HOXB7P09629 217 aa19.31■□□□□ 0.68
DDX11-217ENST00000540935 ALDH1B1P30837 517 aa19.31■□□□□ 0.68
DDX11-217ENST00000540935 C16orf71Q8IYS4 520 aaPredicted RBP19.31■□□□□ 0.68
DDX11-217ENST00000540935 ZNF34Q8IZ26 560 aa19.31■□□□□ 0.68
DDX11-217ENST00000540935 CFAP44Q96MT7 982 aa19.31■□□□□ 0.68
DDX11-217ENST00000540935 ZNF219Q9P2Y4 722 aaPredicted RBP19.31■□□□□ 0.68
DDX11-217ENST00000540935 CACNA1SQ13698 1873 aa19.31■□□□□ 0.68
DDX11-217ENST00000540935 CCDC88AQ3V6T2 1871 aa19.31■□□□□ 0.68
DDX11-217ENST00000540935 PRELPP51888 382 aa19.3■□□□□ 0.68
DDX11-217ENST00000540935 CALD1Q05682 793 aaKnown RBP19.3■□□□□ 0.68
DDX11-217ENST00000540935 PARP10Q53GL7 1025 aa19.3■□□□□ 0.68
DDX11-217ENST00000540935 RIC1Q4ADV7 1423 aa19.3■□□□□ 0.68
DDX11-217ENST00000540935 TIAM2Q8IVF5 1701 aa19.29■□□□□ 0.68
DDX11-217ENST00000540935 GLTPD2A6NH11 291 aa19.29■□□□□ 0.68
DDX11-217ENST00000540935 PPP1R42Q7Z4L9 355 aa19.29■□□□□ 0.68
DDX11-217ENST00000540935 RBM46Q8TBY0 533 aaKnown RBP19.29■□□□□ 0.68
DDX11-217ENST00000540935 UBN2Q6ZU65 1347 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 DICER1Q9UPY3 1922 aaKnown RBP19.28■□□□□ 0.68
DDX11-217ENST00000540935 GPTP24298 496 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 CRY2Q49AN0 593 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 ERFEQ4G0M1 354 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 CCDC93Q567U6 631 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 HSP90AB3PQ58FF7 597 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 DPY19L2Q6NUT2 758 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 C7orf43Q8WVR3 580 aa19.28■□□□□ 0.68
DDX11-217ENST00000540935 DDX21Q9NR30 783 aaKnown RBP eCLIP19.28■□□□□ 0.68
DDX11-217ENST00000540935 APAF1O14727 1248 aa19.27■□□□□ 0.68
DDX11-217ENST00000540935 PROSER3Q2NL68 480 aa19.27■□□□□ 0.68
DDX11-217ENST00000540935 SUSD4Q5VX71 490 aa19.27■□□□□ 0.68
DDX11-217ENST00000540935 RRAGCQ9HB90 399 aa19.27■□□□□ 0.68
DDX11-217ENST00000540935 ABCC12Q96J65 1359 aa19.27■□□□□ 0.68
DDX11-217ENST00000540935 RNF123Q5XPI4 1314 aa19.26■□□□□ 0.67
DDX11-217ENST00000540935 HDGFL1Q5TGJ6 251 aa19.26■□□□□ 0.67
DDX11-217ENST00000540935 COPS6Q7L5N1 327 aa19.26■□□□□ 0.67
DDX11-217ENST00000540935 RTKN2Q8IZC4 609 aa19.26■□□□□ 0.67
DDX11-217ENST00000540935 NECTIN2Q92692 538 aa19.26■□□□□ 0.67
DDX11-217ENST00000540935 NTSR2O95665 410 aa19.25■□□□□ 0.67
DDX11-217ENST00000540935 ANXA1P04083 346 aa19.25■□□□□ 0.67
DDX11-217ENST00000540935 VEGFAP15692 232 aaPredicted RBP19.25■□□□□ 0.67
DDX11-217ENST00000540935 GNAI1P63096 354 aa19.25■□□□□ 0.67
DDX11-217ENST00000540935 KRT24Q2M2I5 525 aa19.25■□□□□ 0.67
DDX11-217ENST00000540935 XAGE3Q8WTP9 111 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms