RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 WDR90Q96KV7 1748 aa21.68■■□□□ 1.06
UBC-208ENST00000540700 CHRNA5P30532 468 aa21.67■■□□□ 1.06
UBC-208ENST00000540700 JMYQ8N9B5 988 aa21.67■■□□□ 1.06
UBC-208ENST00000540700 E9PSI1 815 aa21.66■■□□□ 1.06
UBC-208ENST00000540700 CYP19A1P11511 503 aaPredicted RBP21.66■■□□□ 1.06
UBC-208ENST00000540700 FKBP8Q14318 412 aa21.66■■□□□ 1.06
UBC-208ENST00000540700 SNRPA1P09661 255 aaKnown RBP21.65■■□□□ 1.06
UBC-208ENST00000540700 DDR1Q08345 913 aa21.65■■□□□ 1.06
UBC-208ENST00000540700 DUSP27Q5VZP5 1158 aa21.65■■□□□ 1.06
UBC-208ENST00000540700 TNS4Q8IZW8 715 aa21.65■■□□□ 1.06
UBC-208ENST00000540700 CRKLP46109 303 aaKnown RBP21.64■■□□□ 1.05
UBC-208ENST00000540700 EXOSC9Q06265 439 aaKnown RBP21.64■■□□□ 1.05
UBC-208ENST00000540700 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.05
UBC-208ENST00000540700 ELL2O00472 640 aaPredicted RBP21.63■■□□□ 1.05
UBC-208ENST00000540700 INTS5Q6P9B9 1019 aaKnown RBP21.63■■□□□ 1.05
UBC-208ENST00000540700 MYH14Q7Z406 1995 aaKnown RBP21.62■■□□□ 1.05
UBC-208ENST00000540700 PIP4K2AP48426 406 aaPredicted RBP21.62■■□□□ 1.05
UBC-208ENST00000540700 MYH16Q9H6N6 1097 aa21.62■■□□□ 1.05
UBC-208ENST00000540700 USP42Q9H9J4 1324 aaKnown RBP21.61■■□□□ 1.05
UBC-208ENST00000540700 A1BGP04217 495 aa21.61■■□□□ 1.05
UBC-208ENST00000540700 SMC1BQ8NDV3 1235 aa21.61■■□□□ 1.05
UBC-208ENST00000540700 ZBTB1Q9Y2K1 713 aa21.61■■□□□ 1.05
UBC-208ENST00000540700 RASSF7Q02833 373 aa21.6■■□□□ 1.05
UBC-208ENST00000540700 NECTIN2Q92692 538 aa21.6■■□□□ 1.05
UBC-208ENST00000540700 BRCA1P38398 1863 aaKnown RBP21.6■■□□□ 1.05
UBC-208ENST00000540700 NBPF26B4DH59 902 aa21.59■■□□□ 1.05
UBC-208ENST00000540700 NBPF10Q6P3W6 841 aaKnown RBP21.59■■□□□ 1.05
UBC-208ENST00000540700 NBPF15Q8N660 670 aa21.59■■□□□ 1.05
UBC-208ENST00000540700 EIF2S2P20042 333 aaKnown RBP21.58■■□□□ 1.05
UBC-208ENST00000540700 POLRMTO00411 1230 aaKnown RBP21.57■■□□□ 1.04
UBC-208ENST00000540700 VAMP4O75379 141 aa21.57■■□□□ 1.04
UBC-208ENST00000540700 HOXB7P09629 217 aa21.57■■□□□ 1.04
UBC-208ENST00000540700 PDIA6Q15084 440 aa21.57■■□□□ 1.04
UBC-208ENST00000540700 PROSER3Q2NL68 480 aa21.57■■□□□ 1.04
UBC-208ENST00000540700 TWISTNBQ3B726 338 aaPredicted RBP21.57■■□□□ 1.04
UBC-208ENST00000540700 TEX13AQ9BXU3 409 aaPredicted RBP21.57■■□□□ 1.04
UBC-208ENST00000540700 ARFGEF1Q9Y6D6 1849 aa21.57■■□□□ 1.04
UBC-208ENST00000540700 STARD3NLO95772 234 aa21.56■■□□□ 1.04
UBC-208ENST00000540700 ANXA1P04083 346 aa21.56■■□□□ 1.04
UBC-208ENST00000540700 USPL1Q5W0Q7 1092 aa21.56■■□□□ 1.04
UBC-208ENST00000540700 LRP10Q7Z4F1 713 aa21.56■■□□□ 1.04
UBC-208ENST00000540700 SOS1Q07889 1333 aaPredicted RBP21.55■■□□□ 1.04
UBC-208ENST00000540700 ZPR1O75312 459 aa21.55■■□□□ 1.04
UBC-208ENST00000540700 CANXP27824 592 aaKnown RBP21.55■■□□□ 1.04
UBC-208ENST00000540700 PRELPP51888 382 aa21.55■■□□□ 1.04
UBC-208ENST00000540700 TCERG1O14776 1098 aaKnown RBP21.54■■□□□ 1.04
UBC-208ENST00000540700 TM4SF1P30408 202 aa21.54■■□□□ 1.04
UBC-208ENST00000540700 HDGFL1Q5TGJ6 251 aa21.54■■□□□ 1.04
UBC-208ENST00000540700 HSPA1AP0DMV8 641 aaKnown RBP21.53■■□□□ 1.04
UBC-208ENST00000540700 HSPA1BP0DMV9 641 aaKnown RBP21.53■■□□□ 1.04
UBC-208ENST00000540700 CHPF2Q9P2E5 772 aa21.53■■□□□ 1.04
UBC-208ENST00000540700 VEGFAP15692 232 aaPredicted RBP21.52■■□□□ 1.04
UBC-208ENST00000540700 LMNB1P20700 586 aa21.52■■□□□ 1.04
UBC-208ENST00000540700 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.04
UBC-208ENST00000540700 GLTPD2A6NH11 291 aa21.51■■□□□ 1.03
UBC-208ENST00000540700 TNRC6CQ9HCJ0 1690 aaKnown RBP21.5■■□□□ 1.03
UBC-208ENST00000540700 MYL6BP14649 208 aa21.5■■□□□ 1.03
UBC-208ENST00000540700 NFIXQ14938 502 aa21.5■■□□□ 1.03
UBC-208ENST00000540700 COL15A1P39059 1388 aa21.49■■□□□ 1.03
UBC-208ENST00000540700 IL6STP40189 918 aaPredicted RBP21.49■■□□□ 1.03
UBC-208ENST00000540700 ERBB4Q15303 1308 aa21.49■■□□□ 1.03
UBC-208ENST00000540700 ZC3H4Q9UPT8 1303 aaKnown RBP21.49■■□□□ 1.03
UBC-208ENST00000540700 DDX21Q9NR30 783 aaKnown RBP eCLIP21.48■■□□□ 1.03
UBC-208ENST00000540700 TTLL7Q6ZT98 887 aa21.47■■□□□ 1.03
UBC-208ENST00000540700 C2CD5Q86YS7 1000 aa21.47■■□□□ 1.03
UBC-208ENST00000540700 TTLL6Q8N841 843 aa21.47■■□□□ 1.03
UBC-208ENST00000540700 SBF1O95248 1867 aa21.47■■□□□ 1.03
UBC-208ENST00000540700 SERPINB2P05120 415 aa21.46■■□□□ 1.03
UBC-208ENST00000540700 CCDC30Q5VVM6 783 aa21.46■■□□□ 1.03
UBC-208ENST00000540700 G2E3Q7L622 706 aa21.46■■□□□ 1.03
UBC-208ENST00000540700 PHAXQ9H814 394 aaKnown RBP21.46■■□□□ 1.03
UBC-208ENST00000540700 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
UBC-208ENST00000540700 SSH1Q8WYL5 1049 aa21.45■■□□□ 1.02
UBC-208ENST00000540700 DBF4Q9UBU7 674 aaPredicted RBP21.45■■□□□ 1.02
UBC-208ENST00000540700 NARFQ9UHQ1 456 aa21.45■■□□□ 1.02
UBC-208ENST00000540700 BICDL1Q6ZP65 573 aa21.44■■□□□ 1.02
UBC-208ENST00000540700 TBC1D2BQ9UPU7 963 aa21.44■■□□□ 1.02
UBC-208ENST00000540700 H0YIN7 160 aa21.43■■□□□ 1.02
UBC-208ENST00000540700 NFKBIEO00221 500 aa21.43■■□□□ 1.02
UBC-208ENST00000540700 XAGE3Q8WTP9 111 aa21.43■■□□□ 1.02
UBC-208ENST00000540700 BCL2L13Q9BXK5 485 aa21.43■■□□□ 1.02
UBC-208ENST00000540700 BCL2L12Q9HB09 334 aa21.43■■□□□ 1.02
UBC-208ENST00000540700 ZNF219Q9P2Y4 722 aaPredicted RBP21.43■■□□□ 1.02
UBC-208ENST00000540700 CAMTA2O94983 1202 aa21.42■■□□□ 1.02
UBC-208ENST00000540700 CT47B1P0C2W7 299 aaPredicted RBP21.42■■□□□ 1.02
UBC-208ENST00000540700 RARSP54136 660 aaKnown RBP21.42■■□□□ 1.02
UBC-208ENST00000540700 SCN7AQ01118 1682 aa21.42■■□□□ 1.02
UBC-208ENST00000540700 COPS6Q7L5N1 327 aa21.42■■□□□ 1.02
UBC-208ENST00000540700 MRPL50Q8N5N7 158 aaKnown RBP21.42■■□□□ 1.02
UBC-208ENST00000540700 BCORQ6W2J9 1755 aa21.41■■□□□ 1.02
UBC-208ENST00000540700 CARMIL3Q8ND23 1372 aa21.41■■□□□ 1.02
UBC-208ENST00000540700 POTECB2RU33 542 aa21.41■■□□□ 1.02
UBC-208ENST00000540700 SLC4A2P04920 1241 aa21.41■■□□□ 1.02
UBC-208ENST00000540700 AIMP1Q12904 312 aaKnown RBP21.41■■□□□ 1.02
UBC-208ENST00000540700 DZIP3Q86Y13 1208 aaKnown RBP21.41■■□□□ 1.02
UBC-208ENST00000540700 DPY19L2Q6NUT2 758 aa21.4■■□□□ 1.02
UBC-208ENST00000540700 ZNF622Q969S3 477 aaKnown RBP eCLIP21.4■■□□□ 1.022e-36■□□□□ 10
UBC-208ENST00000540700 HYPKQ9NX55 129 aa21.4■■□□□ 1.02
UBC-208ENST00000540700 MKRN1Q9UHC7 482 aaKnown RBP21.4■■□□□ 1.02
UBC-208ENST00000540700 HLFQ16534 295 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms