RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 F12P00748 615 aaPredicted RBP12.67□□□□□ -0.38
LRP6-205ENST00000540527 OXLD1Q5BKU9 147 aa12.67□□□□□ -0.38
LRP6-205ENST00000540527 TSEN2Q8NCE0 465 aaKnown RBP12.67□□□□□ -0.38
LRP6-205ENST00000540527 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
LRP6-205ENST00000540527 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
LRP6-205ENST00000540527 NIF3L1Q9GZT8 377 aa12.67□□□□□ -0.38
LRP6-205ENST00000540527 KANSL2Q9H9L4 492 aa12.67□□□□□ -0.38
LRP6-205ENST00000540527 CNTN3Q9P232 1028 aa12.67□□□□□ -0.38
LRP6-205ENST00000540527 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
LRP6-205ENST00000540527 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
LRP6-205ENST00000540527 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
LRP6-205ENST00000540527 IGFBP4P22692 258 aa12.66□□□□□ -0.38
LRP6-205ENST00000540527 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
LRP6-205ENST00000540527 FUT2Q10981 343 aa12.66□□□□□ -0.38
LRP6-205ENST00000540527 AAMPQ13685 434 aa12.66□□□□□ -0.38
LRP6-205ENST00000540527 RAVER1Q8IY67 606 aaKnown RBP12.66□□□□□ -0.38
LRP6-205ENST00000540527 PGBD3Q8N328 593 aa12.66□□□□□ -0.38
LRP6-205ENST00000540527 TRPM4Q8TD43 1214 aa12.66□□□□□ -0.38
LRP6-205ENST00000540527 FEZ1Q99689 392 aa12.66□□□□□ -0.38
LRP6-205ENST00000540527 AVENQ9NQS1 362 aaPredicted RBP12.66□□□□□ -0.38
LRP6-205ENST00000540527 ESYT3A0FGR9 886 aa12.65□□□□□ -0.38
LRP6-205ENST00000540527 CD53P19397 219 aa12.65□□□□□ -0.38
LRP6-205ENST00000540527 KRT26Q7Z3Y9 468 aa12.65□□□□□ -0.38
LRP6-205ENST00000540527 TSPAN6O43657 245 aa12.64□□□□□ -0.39
LRP6-205ENST00000540527 FGAP02671 866 aa12.64□□□□□ -0.39
LRP6-205ENST00000540527 COL9A1P20849 921 aa12.64□□□□□ -0.39
LRP6-205ENST00000540527 EIF4BP23588 611 aaKnown RBP12.64□□□□□ -0.39
LRP6-205ENST00000540527 NFE2Q16621 373 aaPredicted RBP12.64□□□□□ -0.39
LRP6-205ENST00000540527 FAM43BQ6ZT52 329 aaPredicted RBP12.64□□□□□ -0.39
LRP6-205ENST00000540527 ARNT2Q9HBZ2 717 aa12.64□□□□□ -0.39
LRP6-205ENST00000540527 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
LRP6-205ENST00000540527 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
LRP6-205ENST00000540527 ESPNB1AK53 854 aa12.63□□□□□ -0.39
LRP6-205ENST00000540527 HLTFQ14527 1009 aaKnown RBP eCLIP12.63□□□□□ -0.39
LRP6-205ENST00000540527 BRDTQ58F21 947 aaPredicted RBP12.63□□□□□ -0.39
LRP6-205ENST00000540527 IER5LQ5T953 404 aa12.63□□□□□ -0.39
LRP6-205ENST00000540527 PDXDC2PQ6P474 469 aa12.63□□□□□ -0.39
LRP6-205ENST00000540527 C16orf86Q6ZW13 317 aa12.63□□□□□ -0.39
LRP6-205ENST00000540527 PACS2Q86VP3 889 aa12.63□□□□□ -0.39
LRP6-205ENST00000540527 OCSTAMPQ9BR26 566 aa12.63□□□□□ -0.39
LRP6-205ENST00000540527 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
LRP6-205ENST00000540527 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
LRP6-205ENST00000540527 BRD3Q15059 726 aa12.62□□□□□ -0.39
LRP6-205ENST00000540527 C16orf46Q6P387 395 aa12.62□□□□□ -0.39
LRP6-205ENST00000540527 CACTIN-AS1Q8N1I8 211 aa12.62□□□□□ -0.39
LRP6-205ENST00000540527 PPM1EQ8WY54 764 aa12.62□□□□□ -0.39
LRP6-205ENST00000540527 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
LRP6-205ENST00000540527 MYL1P05976 194 aa12.61□□□□□ -0.39
LRP6-205ENST00000540527 ETFBP38117 255 aa12.61□□□□□ -0.39
LRP6-205ENST00000540527 EPHB1P54762 984 aa12.61□□□□□ -0.39
LRP6-205ENST00000540527 SYCP2LQ5T4T6 812 aa12.61□□□□□ -0.39
LRP6-205ENST00000540527 LILRB2Q8N423 598 aa12.61□□□□□ -0.39
LRP6-205ENST00000540527 ZNF700Q9H0M5 742 aa12.61□□□□□ -0.39
LRP6-205ENST00000540527 STRIP2Q9ULQ0 834 aa12.61□□□□□ -0.39
LRP6-205ENST00000540527 V9GY48 417 aaPredicted RBP12.61□□□□□ -0.39
LRP6-205ENST00000540527 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
LRP6-205ENST00000540527 CDKN1CP49918 316 aaPredicted RBP12.6□□□□□ -0.39
LRP6-205ENST00000540527 PPP2R5AQ15172 486 aa12.6□□□□□ -0.39
LRP6-205ENST00000540527 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
LRP6-205ENST00000540527 CASS4Q9NQ75 786 aa12.6□□□□□ -0.39
LRP6-205ENST00000540527 CFAP69A5D8W1 941 aa12.59□□□□□ -0.39
LRP6-205ENST00000540527 TRIM6-TRIM34B2RNG4 842 aa12.59□□□□□ -0.39
LRP6-205ENST00000540527 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
LRP6-205ENST00000540527 MAN1A1P33908 653 aa12.59□□□□□ -0.39
LRP6-205ENST00000540527 ZNF280DQ6N043 979 aa12.59□□□□□ -0.39
LRP6-205ENST00000540527 ARPC5LQ9BPX5 153 aa12.59□□□□□ -0.39
LRP6-205ENST00000540527 MAP3K20Q9NYL2 800 aaKnown RBP12.59□□□□□ -0.39
LRP6-205ENST00000540527 ATP8A1Q9Y2Q0 1164 aa12.59□□□□□ -0.39
LRP6-205ENST00000540527 ERBB3P21860 1342 aa12.59□□□□□ -0.39
LRP6-205ENST00000540527 ZNF500O60304 480 aaPredicted RBP12.58□□□□□ -0.4
LRP6-205ENST00000540527 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.4
LRP6-205ENST00000540527 MYBPC2Q14324 1141 aa12.58□□□□□ -0.4
LRP6-205ENST00000540527 TTC39BQ5VTQ0 682 aaPredicted RBP12.58□□□□□ -0.4
LRP6-205ENST00000540527 GJD3Q8N144 294 aa12.58□□□□□ -0.4
LRP6-205ENST00000540527 SAP130Q9H0E3 1048 aa12.58□□□□□ -0.4
LRP6-205ENST00000540527 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
LRP6-205ENST00000540527 MAP10Q9P2G4 905 aa12.58□□□□□ -0.4
LRP6-205ENST00000540527 ANAPC4Q9UJX5 808 aa12.58□□□□□ -0.4
LRP6-205ENST00000540527 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
LRP6-205ENST00000540527 NRDCO43847 1150 aa12.57□□□□□ -0.4
LRP6-205ENST00000540527 HNRNPLLQ8WVV9 542 aaKnown RBP12.57□□□□□ -0.4
LRP6-205ENST00000540527 CEP63Q96MT8 703 aa12.57□□□□□ -0.4
LRP6-205ENST00000540527 CSRNP1Q96S65 589 aa12.57□□□□□ -0.4
LRP6-205ENST00000540527 DNAJC7Q99615 494 aa12.57□□□□□ -0.4
LRP6-205ENST00000540527 CCDC113Q9H0I3 377 aa12.57□□□□□ -0.4
LRP6-205ENST00000540527 STIM2Q9P246 746 aa12.57□□□□□ -0.4
LRP6-205ENST00000540527 ALDH1L1O75891 902 aa12.56□□□□□ -0.4
LRP6-205ENST00000540527 PLCG2P16885 1265 aa12.56□□□□□ -0.4
LRP6-205ENST00000540527 USP5P45974 858 aa12.56□□□□□ -0.4
LRP6-205ENST00000540527 ST13P50502 369 aaKnown RBP12.56□□□□□ -0.4
LRP6-205ENST00000540527 TAF1CQ15572 869 aaPredicted RBP12.56□□□□□ -0.4
LRP6-205ENST00000540527 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
LRP6-205ENST00000540527 JAMLQ86YT9 394 aa12.56□□□□□ -0.4
LRP6-205ENST00000540527 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
LRP6-205ENST00000540527 MSRB2Q9Y3D2 182 aa12.56□□□□□ -0.4
LRP6-205ENST00000540527 ADAM32Q8TC27 787 aa12.55□□□□□ -0.4
LRP6-205ENST00000540527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.41e-7■■■■■ 115.4
LRP6-205ENST00000540527 SMAPO00193 183 aa12.54□□□□□ -0.4
LRP6-205ENST00000540527 SLC4A3P48751 1232 aa12.54□□□□□ -0.4
LRP6-205ENST00000540527 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms