RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-223ENST00000540475 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
SEMA4D-223ENST00000540475 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
SEMA4D-223ENST00000540475 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
SEMA4D-223ENST00000540475 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
SEMA4D-223ENST00000540475 PRELPP51888 382 aa17.29■□□□□ 0.36
SEMA4D-223ENST00000540475 RIPK4P57078 832 aa17.29■□□□□ 0.36
SEMA4D-223ENST00000540475 ERBB4Q15303 1308 aa17.28■□□□□ 0.36
SEMA4D-223ENST00000540475 SRGNP10124 158 aa17.28■□□□□ 0.36
SEMA4D-223ENST00000540475 STYK1Q6J9G0 422 aa17.28■□□□□ 0.36
SEMA4D-223ENST00000540475 TNRC6CQ9HCJ0 1690 aaKnown RBP17.28■□□□□ 0.36
SEMA4D-223ENST00000540475 NFKBIEO00221 500 aa17.27■□□□□ 0.36
SEMA4D-223ENST00000540475 LMNB1P20700 586 aa17.27■□□□□ 0.36
SEMA4D-223ENST00000540475 ST5P78524 1137 aa17.27■□□□□ 0.36
SEMA4D-223ENST00000540475 HLFQ16534 295 aa17.27■□□□□ 0.36
SEMA4D-223ENST00000540475 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
SEMA4D-223ENST00000540475 RNF181Q9P0P0 153 aa17.27■□□□□ 0.36
SEMA4D-223ENST00000540475 TOMM70O94826 608 aa17.26■□□□□ 0.35
SEMA4D-223ENST00000540475 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
SEMA4D-223ENST00000540475 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
SEMA4D-223ENST00000540475 LRP10Q7Z4F1 713 aa17.26■□□□□ 0.35
SEMA4D-223ENST00000540475 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
SEMA4D-223ENST00000540475 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
SEMA4D-223ENST00000540475 MASTLQ96GX5 879 aa17.26■□□□□ 0.35
SEMA4D-223ENST00000540475 TIAM2Q8IVF5 1701 aa17.26■□□□□ 0.35
SEMA4D-223ENST00000540475 HSPA6P17066 643 aa17.25■□□□□ 0.35
SEMA4D-223ENST00000540475 RASSF7Q02833 373 aa17.25■□□□□ 0.35
SEMA4D-223ENST00000540475 NBPF5PQ86XG9 351 aaPredicted RBP17.25■□□□□ 0.35
SEMA4D-223ENST00000540475 ZNF622Q969S3 477 aaKnown RBP eCLIP17.25■□□□□ 0.35
SEMA4D-223ENST00000540475 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
SEMA4D-223ENST00000540475 NMRK2Q9NPI5 230 aa17.25■□□□□ 0.35
SEMA4D-223ENST00000540475 TSPYL4Q9UJ04 414 aa17.25■□□□□ 0.35
SEMA4D-223ENST00000540475 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
SEMA4D-223ENST00000540475 MAP3K15Q6ZN16 1313 aa17.24■□□□□ 0.35
SEMA4D-223ENST00000540475 KDM2BQ8NHM5 1336 aa17.24■□□□□ 0.35
SEMA4D-223ENST00000540475 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
SEMA4D-223ENST00000540475 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
SEMA4D-223ENST00000540475 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
SEMA4D-223ENST00000540475 CHL1O00533 1208 aa17.23■□□□□ 0.35
SEMA4D-223ENST00000540475 PDIA6Q15084 440 aa17.23■□□□□ 0.35
SEMA4D-223ENST00000540475 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
SEMA4D-223ENST00000540475 ADAMTS8Q9UP79 889 aa17.23■□□□□ 0.35
SEMA4D-223ENST00000540475 RIC1Q4ADV7 1423 aa17.22■□□□□ 0.35
SEMA4D-223ENST00000540475 C21orf2O43822 256 aa17.22■□□□□ 0.35
SEMA4D-223ENST00000540475 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
SEMA4D-223ENST00000540475 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
SEMA4D-223ENST00000540475 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
SEMA4D-223ENST00000540475 NPR1P16066 1061 aa17.21■□□□□ 0.35
SEMA4D-223ENST00000540475 SOGA3Q5TF21 947 aa17.21■□□□□ 0.35
SEMA4D-223ENST00000540475 PRPF40BQ6NWY9 871 aaKnown RBP17.21■□□□□ 0.35
SEMA4D-223ENST00000540475 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.35
SEMA4D-223ENST00000540475 RBM46Q8TBY0 533 aaKnown RBP17.21■□□□□ 0.35
SEMA4D-223ENST00000540475 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
SEMA4D-223ENST00000540475 NPHP1O15259 732 aa17.2■□□□□ 0.34
SEMA4D-223ENST00000540475 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.34
SEMA4D-223ENST00000540475 CRY2Q49AN0 593 aa17.2■□□□□ 0.34
SEMA4D-223ENST00000540475 KIF6Q6ZMV9 814 aa17.2■□□□□ 0.34
SEMA4D-223ENST00000540475 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
SEMA4D-223ENST00000540475 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
SEMA4D-223ENST00000540475 WDR90Q96KV7 1748 aa17.2■□□□□ 0.34
SEMA4D-223ENST00000540475 MYL6BP14649 208 aa17.19■□□□□ 0.34
SEMA4D-223ENST00000540475 GIGYF2Q6Y7W6 1299 aaKnown RBP17.19■□□□□ 0.34
SEMA4D-223ENST00000540475 RRAGCQ9HB90 399 aa17.19■□□□□ 0.34
SEMA4D-223ENST00000540475 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
SEMA4D-223ENST00000540475 UBN2Q6ZU65 1347 aa17.18■□□□□ 0.34
SEMA4D-223ENST00000540475 ALDH1B1P30837 517 aa17.17■□□□□ 0.34
SEMA4D-223ENST00000540475 FSTL1Q12841 308 aa17.17■□□□□ 0.34
SEMA4D-223ENST00000540475 SNED1Q8TER0 1413 aa17.17■□□□□ 0.34
SEMA4D-223ENST00000540475 TAOK3Q9H2K8 898 aa17.17■□□□□ 0.34
SEMA4D-223ENST00000540475 HOXA10P31260 410 aaPredicted RBP17.16■□□□□ 0.34
SEMA4D-223ENST00000540475 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
SEMA4D-223ENST00000540475 PROSER3Q2NL68 480 aa17.16■□□□□ 0.34
SEMA4D-223ENST00000540475 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
SEMA4D-223ENST00000540475 ZBTB3Q9H5J0 574 aa17.16■□□□□ 0.34
SEMA4D-223ENST00000540475 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 POTECB2RU33 542 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 NTSR2O95665 410 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 HOXB7P09629 217 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 VEGFAP15692 232 aaPredicted RBP17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 APLP1P51693 650 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 ERFEQ4G0M1 354 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 PARP10Q53GL7 1025 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 SLC10A5Q5PT55 438 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
SEMA4D-223ENST00000540475 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
SEMA4D-223ENST00000540475 GTF2E1P29083 439 aaPredicted RBP17.14■□□□□ 0.33
SEMA4D-223ENST00000540475 CCDC93Q567U6 631 aa17.14■□□□□ 0.33
SEMA4D-223ENST00000540475 NUTM1Q86Y26 1132 aa17.14■□□□□ 0.33
SEMA4D-223ENST00000540475 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
SEMA4D-223ENST00000540475 GPTP24298 496 aa17.13■□□□□ 0.33
SEMA4D-223ENST00000540475 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-223ENST00000540475 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
SEMA4D-223ENST00000540475 DPY19L2Q6NUT2 758 aa17.13■□□□□ 0.33
SEMA4D-223ENST00000540475 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
SEMA4D-223ENST00000540475 DNAJC5GQ8N7S2 189 aa17.13■□□□□ 0.33
SEMA4D-223ENST00000540475 RNF123Q5XPI4 1314 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms