RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 DCTN1Q14203 1278 aa15.1■□□□□ 0.01
CYB561A3-215ENST00000540317 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
CYB561A3-215ENST00000540317 TEX13AQ9BXU3 409 aaPredicted RBP15.1■□□□□ 0.01
CYB561A3-215ENST00000540317 ZBTB1Q9Y2K1 713 aa15.1■□□□□ 0.01
CYB561A3-215ENST00000540317 GOLGB1Q14789 3259 aaKnown RBP15.1■□□□□ 0.01
CYB561A3-215ENST00000540317 CEMIPQ8WUJ3 1361 aa15.1■□□□□ 0.01
CYB561A3-215ENST00000540317 MYH14Q7Z406 1995 aaKnown RBP15.09■□□□□ 0.01
CYB561A3-215ENST00000540317 COL5A3P25940 1745 aaPredicted RBP15.09■□□□□ 0.01
CYB561A3-215ENST00000540317 USP42Q9H9J4 1324 aaKnown RBP15.09■□□□□ 0.01
CYB561A3-215ENST00000540317 KCNQ3O43525 872 aa15.08■□□□□ 0
CYB561A3-215ENST00000540317 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0
CYB561A3-215ENST00000540317 ITPRIPQ8IWB1 547 aa15.08■□□□□ 0
CYB561A3-215ENST00000540317 TSPYL6Q8N831 410 aa15.08■□□□□ 0
CYB561A3-215ENST00000540317 C8orf58Q8NAV2 365 aa15.08■□□□□ 0
CYB561A3-215ENST00000540317 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
CYB561A3-215ENST00000540317 TNNQ9UQP3 1299 aa15.08■□□□□ 0
CYB561A3-215ENST00000540317 ZNF330Q9Y3S2 320 aaPredicted RBP15.08■□□□□ 0
CYB561A3-215ENST00000540317 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0
CYB561A3-215ENST00000540317 KCPQ6ZWJ8 1503 aa15.08■□□□□ 0
CYB561A3-215ENST00000540317 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
CYB561A3-215ENST00000540317 IGHDP01880 384 aa15.07■□□□□ 0
CYB561A3-215ENST00000540317 HEG1Q9ULI3 1381 aa15.07■□□□□ 0
CYB561A3-215ENST00000540317 PDE4AP27815 886 aa15.07■□□□□ 0
CYB561A3-215ENST00000540317 NPM2Q86SE8 214 aaKnown RBP15.07■□□□□ 0
CYB561A3-215ENST00000540317 BACH2Q9BYV9 841 aa15.07■□□□□ 0
CYB561A3-215ENST00000540317 TJP1Q07157 1748 aa15.06■□□□□ 0
CYB561A3-215ENST00000540317 TAF7Q15545 349 aaPredicted RBP15.06■□□□□ 0
CYB561A3-215ENST00000540317 TMEM57Q8N5G2 664 aa15.06■□□□□ 0
CYB561A3-215ENST00000540317 NARFQ9UHQ1 456 aa15.06■□□□□ 0
CYB561A3-215ENST00000540317 PCDHB15Q9Y5E8 787 aa15.06■□□□□ 0
CYB561A3-215ENST00000540317 VIRMAQ69YN4 1812 aaKnown RBP15.06■□□□□ 0
CYB561A3-215ENST00000540317 COL15A1P39059 1388 aa15.05■□□□□ -0
CYB561A3-215ENST00000540317 A0A0G2JLW4 131 aa15.05■□□□□ -0
CYB561A3-215ENST00000540317 TGFB2P61812 414 aa15.05■□□□□ -0
CYB561A3-215ENST00000540317 HDAC1Q13547 482 aaPredicted RBP15.05■□□□□ -0
CYB561A3-215ENST00000540317 MIS18AQ9NYP9 233 aa15.05■□□□□ -0
CYB561A3-215ENST00000540317 TSPYL4Q9UJ04 414 aa15.05■□□□□ -0
CYB561A3-215ENST00000540317 A1BGP04217 495 aa15.04■□□□□ -0
CYB561A3-215ENST00000540317 ZNF784Q8NCA9 323 aaPredicted RBP15.04■□□□□ -0
CYB561A3-215ENST00000540317 ZBTB40Q9NUA8 1239 aa15.04■□□□□ -0
CYB561A3-215ENST00000540317 ABCC4O15439 1325 aa15.03■□□□□ -0
CYB561A3-215ENST00000540317 A0A087WZG4 1122 aa15.03■□□□□ -0
CYB561A3-215ENST00000540317 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
CYB561A3-215ENST00000540317 TM4SF1P30408 202 aa15.03■□□□□ -0
CYB561A3-215ENST00000540317 EIF5P55010 431 aaKnown RBP15.03■□□□□ -0
CYB561A3-215ENST00000540317 DDR1Q08345 913 aa15.03■□□□□ -0
CYB561A3-215ENST00000540317 USP16Q9Y5T5 823 aa15.03■□□□□ -0
CYB561A3-215ENST00000540317 CICQ96RK0 1608 aaPredicted RBP15.03■□□□□ -0
CYB561A3-215ENST00000540317 PTPRCP08575 1304 aa15.03■□□□□ -0
CYB561A3-215ENST00000540317 SNRPA1P09661 255 aaKnown RBP15.02■□□□□ -0
CYB561A3-215ENST00000540317 ANP32AP39687 249 aaKnown RBP15.02■□□□□ -0
CYB561A3-215ENST00000540317 CHMP4AQ9BY43 222 aa15.02■□□□□ -0
CYB561A3-215ENST00000540317 PRAMEF22A3QJZ6 481 aa15.02□□□□□ -0.01
CYB561A3-215ENST00000540317 POLRMTO00411 1230 aaKnown RBP15.02□□□□□ -0.01
CYB561A3-215ENST00000540317 DPEP1P16444 411 aa15.02□□□□□ -0.01
CYB561A3-215ENST00000540317 NFIXQ14938 502 aa15.02□□□□□ -0.01
CYB561A3-215ENST00000540317 BICDL1Q6ZP65 573 aa15.02□□□□□ -0.01
CYB561A3-215ENST00000540317 TBC1D2BQ9UPU7 963 aa15.02□□□□□ -0.01
CYB561A3-215ENST00000540317 BCS1LQ9Y276 419 aa15.02□□□□□ -0.01
CYB561A3-215ENST00000540317 IL6STP40189 918 aaPredicted RBP15.01□□□□□ -0.01
CYB561A3-215ENST00000540317 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
CYB561A3-215ENST00000540317 BCL2L12Q9HB09 334 aa15.01□□□□□ -0.01
CYB561A3-215ENST00000540317 C4AP0C0L4 1744 aa15.01□□□□□ -0.01
CYB561A3-215ENST00000540317 UBR2Q8IWV8 1755 aa15□□□□□ -0.01
CYB561A3-215ENST00000540317 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
CYB561A3-215ENST00000540317 C10orf71Q711Q0 1435 aa14.99□□□□□ -0.01
CYB561A3-215ENST00000540317 ZBTB7BO15156 539 aaPredicted RBP14.99□□□□□ -0.01
CYB561A3-215ENST00000540317 SERPINB2P05120 415 aa14.99□□□□□ -0.01
CYB561A3-215ENST00000540317 PXDNLA1KZ92 1463 aa14.99□□□□□ -0.01
CYB561A3-215ENST00000540317 CHD4Q14839 1912 aa14.99□□□□□ -0.01
CYB561A3-215ENST00000540317 SIPA1L3O60292 1781 aaPredicted RBP14.99□□□□□ -0.01
CYB561A3-215ENST00000540317 INTS3Q68E01 1043 aaKnown RBP14.98□□□□□ -0.01
CYB561A3-215ENST00000540317 PIM2Q9P1W9 311 aa14.98□□□□□ -0.01
CYB561A3-215ENST00000540317 RGS3P49796 1198 aa14.98□□□□□ -0.01
CYB561A3-215ENST00000540317 DZIP3Q86Y13 1208 aaKnown RBP14.98□□□□□ -0.01
CYB561A3-215ENST00000540317 KCNA3P22001 575 aa14.97□□□□□ -0.01
CYB561A3-215ENST00000540317 CHRNA5P30532 468 aa14.97□□□□□ -0.01
CYB561A3-215ENST00000540317 CCDC30Q5VVM6 783 aa14.97□□□□□ -0.01
CYB561A3-215ENST00000540317 TBC1D9BQ66K14 1250 aa14.97□□□□□ -0.01
CYB561A3-215ENST00000540317 STK31Q9BXU1 1019 aa14.97□□□□□ -0.01
CYB561A3-215ENST00000540317 ARHGAP27Q6ZUM4 889 aa14.96□□□□□ -0.01
CYB561A3-215ENST00000540317 SMC5Q8IY18 1101 aa14.96□□□□□ -0.01
CYB561A3-215ENST00000540317 PDZRN3Q9UPQ7 1066 aa14.96□□□□□ -0.01
CYB561A3-215ENST00000540317 NPHP1O15259 732 aa14.95□□□□□ -0.02
CYB561A3-215ENST00000540317 HOXB7P09629 217 aa14.95□□□□□ -0.02
CYB561A3-215ENST00000540317 DALRD3Q5D0E6 543 aaKnown RBP14.95□□□□□ -0.02
CYB561A3-215ENST00000540317 SKAP1Q86WV1 359 aa14.95□□□□□ -0.02
CYB561A3-215ENST00000540317 SETDB2Q96T68 719 aa14.95□□□□□ -0.02
CYB561A3-215ENST00000540317 NBPF26B4DH59 902 aa14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 GIGYF1O75420 1035 aaPredicted RBP14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 CAMTA2O94983 1202 aa14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 EIF4A1P60842 406 aaKnown RBP14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 KRT24Q2M2I5 525 aa14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 NBPF10Q6P3W6 841 aaKnown RBP14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 NBPF15Q8N660 670 aa14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 GCC1Q96CN9 775 aa14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 C8orf34Q49A92 452 aa14.94□□□□□ -0.02
CYB561A3-215ENST00000540317 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
CYB561A3-215ENST00000540317 IPO9Q96P70 1041 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms