RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
PBX1-212ENST00000540236 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 FOXR1Q6PIV2 292 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 ACTN3Q08043 901 aaPredicted RBP12.83□□□□□ -0.36
PBX1-212ENST00000540236 AP1ARQ63HQ0 302 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 ATRIPQ8WXE1 791 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 GPATCH3Q96I76 525 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 PPP1R13BQ96KQ4 1090 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 F6X3S4 739 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 KIF5CO60282 957 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 LRRN4CLQ8ND94 238 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 SPTLC3Q9NUV7 552 aa12.83□□□□□ -0.36
PBX1-212ENST00000540236 CCDC144BQ3MJ40 725 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 PACS2Q86VP3 889 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 PPFIBP1Q86W92 1011 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 CCDC144CPQ8IYA2 1237 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 CNTROBQ8N137 903 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 NEMFO60524 1076 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 PRXQ9BXM0 1461 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
PBX1-212ENST00000540236 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
PBX1-212ENST00000540236 MAP9Q49MG5 647 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 TAX1BP1Q86VP1 789 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 RASSF8Q8NHQ8 419 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 PALD1Q9ULE6 856 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 LIMCH1Q9UPQ0 1083 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 IGF1RP08069 1367 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 MAGEA9P43362 315 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 ANKRD18AQ8IVF6 992 aa12.82□□□□□ -0.36
PBX1-212ENST00000540236 GSDMDP57764 484 aa12.81□□□□□ -0.36
PBX1-212ENST00000540236 FAM204AQ9H8W3 233 aa12.81□□□□□ -0.36
PBX1-212ENST00000540236 IFIT2P09913 472 aaKnown RBP12.81□□□□□ -0.36
PBX1-212ENST00000540236 NAIF1Q69YI7 327 aaPredicted RBP12.81□□□□□ -0.36
PBX1-212ENST00000540236 KLHL10Q6JEL2 608 aa12.81□□□□□ -0.36
PBX1-212ENST00000540236 TMPOP42166 694 aaKnown RBP12.81□□□□□ -0.36
PBX1-212ENST00000540236 ZNF569Q5MCW4 686 aa12.81□□□□□ -0.36
PBX1-212ENST00000540236 TMEM132EQ6IEE7 984 aa12.81□□□□□ -0.36
PBX1-212ENST00000540236 LRRC2Q9BYS8 371 aa12.81□□□□□ -0.36
PBX1-212ENST00000540236 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
PBX1-212ENST00000540236 SKAP2O75563 359 aaPredicted RBP12.81□□□□□ -0.36
PBX1-212ENST00000540236 TACO1Q9BSH4 297 aaKnown RBP12.81□□□□□ -0.36
PBX1-212ENST00000540236 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
PBX1-212ENST00000540236 EZRP15311 586 aaKnown RBP12.8□□□□□ -0.36
PBX1-212ENST00000540236 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
PBX1-212ENST00000540236 HGSO14964 777 aaPredicted RBP12.8□□□□□ -0.36
PBX1-212ENST00000540236 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
PBX1-212ENST00000540236 BRD1O95696 1058 aa12.8□□□□□ -0.36
PBX1-212ENST00000540236 FBLN1P23142 703 aa12.8□□□□□ -0.36
PBX1-212ENST00000540236 UBASH3AP57075 661 aa12.8□□□□□ -0.36
PBX1-212ENST00000540236 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
PBX1-212ENST00000540236 BUB1BO60566 1050 aaPredicted RBP12.8□□□□□ -0.36
PBX1-212ENST00000540236 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
PBX1-212ENST00000540236 ERC1Q8IUD2 1116 aa12.8□□□□□ -0.36
PBX1-212ENST00000540236 CCDC150Q8NCX0 1101 aa12.8□□□□□ -0.36
PBX1-212ENST00000540236 ZMYND10O75800 440 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 KIF2CQ99661 725 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 DESI2Q9BSY9 194 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 FYB1O15117 783 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
PBX1-212ENST00000540236 GPIHBP1Q8IV16 184 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 ADAM21Q9UKJ8 722 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 NR1I2O75469 434 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 AP5Z1O43299 807 aa12.79□□□□□ -0.36
PBX1-212ENST00000540236 DDX19AQ9NUU7 478 aaKnown RBP12.79□□□□□ -0.36
PBX1-212ENST00000540236 PER1O15534 1290 aaPredicted RBP12.78□□□□□ -0.36
PBX1-212ENST00000540236 EPB41L2O43491 1005 aaKnown RBP12.78□□□□□ -0.36
PBX1-212ENST00000540236 FAM76AQ8TAV0 307 aa12.78□□□□□ -0.36
PBX1-212ENST00000540236 CBFA2T2O43439 604 aa12.78□□□□□ -0.36
PBX1-212ENST00000540236 WDHD1O75717 1129 aaPredicted RBP12.78□□□□□ -0.36
PBX1-212ENST00000540236 GUCY2CP25092 1073 aa12.78□□□□□ -0.36
PBX1-212ENST00000540236 ESYT1Q9BSJ8 1104 aa12.78□□□□□ -0.36
PBX1-212ENST00000540236 ATP1A2P50993 1020 aa12.78□□□□□ -0.36
PBX1-212ENST00000540236 PSMD2Q13200 908 aa12.78□□□□□ -0.36
PBX1-212ENST00000540236 CDC37L1Q7L3B6 337 aa12.78□□□□□ -0.36
PBX1-212ENST00000540236 CTIFO43310 598 aaKnown RBP12.77□□□□□ -0.36
PBX1-212ENST00000540236 ENOX2Q16206 610 aaKnown RBP12.77□□□□□ -0.36
PBX1-212ENST00000540236 MAATS1Q7Z4T9 603 aa12.77□□□□□ -0.36
PBX1-212ENST00000540236 FSD1Q9BTV5 496 aa12.77□□□□□ -0.36
PBX1-212ENST00000540236 CFAP45Q9UL16 551 aa12.77□□□□□ -0.36
PBX1-212ENST00000540236 IBTKQ9P2D0 1353 aaPredicted RBP12.77□□□□□ -0.36
PBX1-212ENST00000540236 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.36
PBX1-212ENST00000540236 CHMP4BP1P59074 171 aa12.77□□□□□ -0.37
PBX1-212ENST00000540236 MMS22LQ6ZRQ5 1243 aa12.77□□□□□ -0.37
PBX1-212ENST00000540236 CD248Q9HCU0 757 aa12.77□□□□□ -0.37
PBX1-212ENST00000540236 N4BP1O75113 896 aaKnown RBP12.77□□□□□ -0.37
PBX1-212ENST00000540236 RRP12Q5JTH9 1297 aaKnown RBP12.77□□□□□ -0.37
PBX1-212ENST00000540236 CFAP70Q5T0N1 1121 aa12.77□□□□□ -0.37
PBX1-212ENST00000540236 RSRC1Q96IZ7 334 aaKnown RBP12.77□□□□□ -0.37
PBX1-212ENST00000540236 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.37
PBX1-212ENST00000540236 BCORL1Q5H9F3 1711 aa12.77□□□□□ -0.37
PBX1-212ENST00000540236 SPECC1Q5M775 1068 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 TRIM68Q6AZZ1 485 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 C11orf57Q6ZUT1 292 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms