RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 BTBD11A6QL63 1104 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 RGL2O15211 777 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 HOXB7P09629 217 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 EVA1CP58658 441 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.45
MDH1-215ENST00000539945 ITPRIPQ8IWB1 547 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 IFNL2Q8IZJ0 200 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 SLC4A5Q9BY07 1137 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 CHMP4AQ9BY43 222 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 CHMP4BQ9H444 224 aaKnown RBP12.27□□□□□ -0.45
MDH1-215ENST00000539945 TSHZ2Q9NRE2 1034 aa12.27□□□□□ -0.45
MDH1-215ENST00000539945 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
MDH1-215ENST00000539945 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
MDH1-215ENST00000539945 CCDC30Q5VVM6 783 aa12.26□□□□□ -0.45
MDH1-215ENST00000539945 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
MDH1-215ENST00000539945 CYP27B1O15528 508 aa12.25□□□□□ -0.45
MDH1-215ENST00000539945 LARP1Q6PKG0 1096 aaKnown RBP12.25□□□□□ -0.45
MDH1-215ENST00000539945 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
MDH1-215ENST00000539945 PCDHB15Q9Y5E8 787 aa12.25□□□□□ -0.45
MDH1-215ENST00000539945 KDM6AO15550 1401 aaPredicted RBP12.25□□□□□ -0.45
MDH1-215ENST00000539945 RGS12O14924 1447 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 IGHDP01880 384 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 IL2RBP14784 551 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 DSG2Q14126 1118 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 ZCRB1Q8TBF4 217 aaKnown RBP12.24□□□□□ -0.45
MDH1-215ENST00000539945 STK31Q9BXU1 1019 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 SLC52A2Q9HAB3 445 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 STRN4Q9NRL3 753 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 CACNA1FO60840 1977 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 HEG1Q9ULI3 1381 aa12.24□□□□□ -0.45
MDH1-215ENST00000539945 ZBTB7BO15156 539 aaPredicted RBP12.23□□□□□ -0.45
MDH1-215ENST00000539945 INTS3Q68E01 1043 aaKnown RBP12.23□□□□□ -0.45
MDH1-215ENST00000539945 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
MDH1-215ENST00000539945 MRC1P22897 1456 aa12.23□□□□□ -0.45
MDH1-215ENST00000539945 PCDH11XQ9BZA7 1347 aa12.23□□□□□ -0.45
MDH1-215ENST00000539945 PCDH11YQ9BZA8 1340 aa12.23□□□□□ -0.45
MDH1-215ENST00000539945 KCNQ3O43525 872 aa12.22□□□□□ -0.45
MDH1-215ENST00000539945 PIP4K2BP78356 416 aa12.22□□□□□ -0.45
MDH1-215ENST00000539945 ZNF454Q8N9F8 522 aa12.22□□□□□ -0.45
MDH1-215ENST00000539945 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
MDH1-215ENST00000539945 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.45
MDH1-215ENST00000539945 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
MDH1-215ENST00000539945 HDGFL1Q5TGJ6 251 aa12.21□□□□□ -0.45
MDH1-215ENST00000539945 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
MDH1-215ENST00000539945 A0A0G2JS52 829 aa12.2□□□□□ -0.46
MDH1-215ENST00000539945 GIGYF1O75420 1035 aaPredicted RBP12.2□□□□□ -0.46
MDH1-215ENST00000539945 PTPREP23469 700 aa12.2□□□□□ -0.46
MDH1-215ENST00000539945 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
MDH1-215ENST00000539945 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
MDH1-215ENST00000539945 G2E3Q7L622 706 aa12.2□□□□□ -0.46
MDH1-215ENST00000539945 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
MDH1-215ENST00000539945 FLIIQ13045 1269 aa12.2□□□□□ -0.46
MDH1-215ENST00000539945 SHANK3Q9BYB0 1731 aa12.19□□□□□ -0.46
MDH1-215ENST00000539945 ERVV-2B6SEH9 535 aa12.19□□□□□ -0.46
MDH1-215ENST00000539945 CABP4P57796 275 aa12.19□□□□□ -0.46
MDH1-215ENST00000539945 NECTIN2Q92692 538 aa12.19□□□□□ -0.46
MDH1-215ENST00000539945 DISP2A7MBM2 1401 aa12.18□□□□□ -0.46
MDH1-215ENST00000539945 PLCH1Q4KWH8 1693 aa12.18□□□□□ -0.46
MDH1-215ENST00000539945 CCT4P50991 539 aaKnown RBP12.18□□□□□ -0.46
MDH1-215ENST00000539945 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
MDH1-215ENST00000539945 WNT2BQ93097 391 aa12.18□□□□□ -0.46
MDH1-215ENST00000539945 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
MDH1-215ENST00000539945 EIF2S2P20042 333 aaKnown RBP12.17□□□□□ -0.46
MDH1-215ENST00000539945 DBF4Q9UBU7 674 aaPredicted RBP12.17□□□□□ -0.46
MDH1-215ENST00000539945 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
MDH1-215ENST00000539945 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
MDH1-215ENST00000539945 FKBP5Q13451 457 aaPredicted RBP12.16□□□□□ -0.46
MDH1-215ENST00000539945 CHPF2Q9P2E5 772 aa12.16□□□□□ -0.46
MDH1-215ENST00000539945 USP35Q9P2H5 1018 aa12.16□□□□□ -0.46
MDH1-215ENST00000539945 PXDNLA1KZ92 1463 aa12.16□□□□□ -0.46
MDH1-215ENST00000539945 NRAPQ86VF7 1730 aa12.16□□□□□ -0.46
MDH1-215ENST00000539945 F6X3S4 739 aa12.15□□□□□ -0.46
MDH1-215ENST00000539945 SMC5Q8IY18 1101 aa12.15□□□□□ -0.46
MDH1-215ENST00000539945 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
MDH1-215ENST00000539945 CERKQ8TCT0 537 aa12.15□□□□□ -0.46
MDH1-215ENST00000539945 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
MDH1-215ENST00000539945 CDCA7Q9BWT1 371 aaPredicted RBP12.15□□□□□ -0.46
MDH1-215ENST00000539945 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
MDH1-215ENST00000539945 N4BP2Q86UW6 1770 aaPredicted RBP12.15□□□□□ -0.46
MDH1-215ENST00000539945 JCADQ9P266 1359 aa12.15□□□□□ -0.47
MDH1-215ENST00000539945 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
MDH1-215ENST00000539945 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
MDH1-215ENST00000539945 BHMG1C9JSJ3 638 aaPredicted RBP12.14□□□□□ -0.47
MDH1-215ENST00000539945 SNRPA1P09661 255 aaKnown RBP12.14□□□□□ -0.47
MDH1-215ENST00000539945 SKAP1Q86WV1 359 aa12.14□□□□□ -0.47
MDH1-215ENST00000539945 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
MDH1-215ENST00000539945 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
MDH1-215ENST00000539945 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
MDH1-215ENST00000539945 PHAXQ9H814 394 aaKnown RBP12.14□□□□□ -0.47
MDH1-215ENST00000539945 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
MDH1-215ENST00000539945 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
MDH1-215ENST00000539945 SLIT2O94813 1529 aa12.14□□□□□ -0.47
MDH1-215ENST00000539945 WNK3Q9BYP7 1800 aa12.13□□□□□ -0.47
MDH1-215ENST00000539945 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
MDH1-215ENST00000539945 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
MDH1-215ENST00000539945 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.474e-6■□□□□ 11.2
MDH1-215ENST00000539945 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
MDH1-215ENST00000539945 RBM19Q9Y4C8 960 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms