RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CNBD1Q8NA66 436 aa22.06■■□□□ 1.12
DDB1-215ENST00000539712 LMOD3Q0VAK6 560 aa22.05■■□□□ 1.12
DDB1-215ENST00000539712 C9orf131Q5VYM1 1079 aa22.05■■□□□ 1.12
DDB1-215ENST00000539712 TTLL7Q6ZT98 887 aa22.05■■□□□ 1.12
DDB1-215ENST00000539712 LRP10Q7Z4F1 713 aa22.05■■□□□ 1.12
DDB1-215ENST00000539712 COL11A2P13942 1736 aaPredicted RBP22.04■■□□□ 1.12
DDB1-215ENST00000539712 CHL1O00533 1208 aa22.04■■□□□ 1.12
DDB1-215ENST00000539712 PDE6BP35913 854 aa22.04■■□□□ 1.12
DDB1-215ENST00000539712 PRELPP51888 382 aa22.04■■□□□ 1.12
DDB1-215ENST00000539712 PDIA6Q15084 440 aa22.04■■□□□ 1.12
DDB1-215ENST00000539712 ZNF652Q9Y2D9 606 aa22.04■■□□□ 1.12
DDB1-215ENST00000539712 NGEFQ8N5V2 710 aa22.03■■□□□ 1.12
DDB1-215ENST00000539712 PDZRN3Q9UPQ7 1066 aa22.03■■□□□ 1.12
DDB1-215ENST00000539712 NIP7Q9Y221 180 aaKnown RBP eCLIP22.03■■□□□ 1.12
DDB1-215ENST00000539712 ERVV-1B6SEH8 477 aa22.02■■□□□ 1.12
DDB1-215ENST00000539712 MYL6BP14649 208 aa22.02■■□□□ 1.12
DDB1-215ENST00000539712 NBPF5PQ86XG9 351 aaPredicted RBP22.02■■□□□ 1.12
DDB1-215ENST00000539712 SBF1O95248 1867 aa22.02■■□□□ 1.12
DDB1-215ENST00000539712 KLRG2A4D1S0 409 aaPredicted RBP22.01■■□□□ 1.11
DDB1-215ENST00000539712 KIF3CO14782 793 aa22.01■■□□□ 1.11
DDB1-215ENST00000539712 SRGNP10124 158 aa22.01■■□□□ 1.11
DDB1-215ENST00000539712 CCDC184Q52MB2 194 aa22.01■■□□□ 1.11
DDB1-215ENST00000539712 ERBB4Q15303 1308 aa22.01■■□□□ 1.11
DDB1-215ENST00000539712 MAP3K15Q6ZN16 1313 aa22.01■■□□□ 1.11
DDB1-215ENST00000539712 ST5P78524 1137 aa22■■□□□ 1.11
DDB1-215ENST00000539712 RASSF7Q02833 373 aa22■■□□□ 1.11
DDB1-215ENST00000539712 KRT24Q2M2I5 525 aa22■■□□□ 1.11
DDB1-215ENST00000539712 PROSER3Q2NL68 480 aa22■■□□□ 1.11
DDB1-215ENST00000539712 ZNF622Q969S3 477 aaKnown RBP eCLIP22■■□□□ 1.114e-6■■□□□ 13.5
DDB1-215ENST00000539712 NFKBIEO00221 500 aa21.99■■□□□ 1.11
DDB1-215ENST00000539712 STYK1Q6J9G0 422 aa21.98■■□□□ 1.11
DDB1-215ENST00000539712 TPTE2Q6XPS3 522 aa21.98■■□□□ 1.11
DDB1-215ENST00000539712 RNF181Q9P0P0 153 aa21.98■■□□□ 1.11
DDB1-215ENST00000539712 NUP98P52948 1817 aa21.97■■□□□ 1.11
DDB1-215ENST00000539712 EIF2S2P20042 333 aaKnown RBP21.97■■□□□ 1.11
DDB1-215ENST00000539712 FAM177BA6PVY3 158 aa21.96■■□□□ 1.11
DDB1-215ENST00000539712 APAF1O14727 1248 aa21.96■■□□□ 1.11
DDB1-215ENST00000539712 NPHP1O15259 732 aa21.96■■□□□ 1.11
DDB1-215ENST00000539712 C21orf2O43822 256 aa21.96■■□□□ 1.11
DDB1-215ENST00000539712 ANXA1P04083 346 aa21.96■■□□□ 1.11
DDB1-215ENST00000539712 ZBTB3Q9H5J0 574 aa21.96■■□□□ 1.11
DDB1-215ENST00000539712 SLX4Q8IY92 1834 aa21.96■■□□□ 1.11
DDB1-215ENST00000539712 KIF6Q6ZMV9 814 aa21.95■■□□□ 1.1
DDB1-215ENST00000539712 ZNF34Q8IZ26 560 aa21.95■■□□□ 1.1
DDB1-215ENST00000539712 C7orf43Q8WVR3 580 aa21.95■■□□□ 1.1
DDB1-215ENST00000539712 MASTLQ96GX5 879 aa21.95■■□□□ 1.1
DDB1-215ENST00000539712 NMRK2Q9NPI5 230 aa21.95■■□□□ 1.1
DDB1-215ENST00000539712 UBN2Q6ZU65 1347 aa21.95■■□□□ 1.1
DDB1-215ENST00000539712 ZNF316A6NFI3 1004 aaPredicted RBP21.94■■□□□ 1.1
DDB1-215ENST00000539712 ZNF853P0CG23 659 aa21.94■■□□□ 1.1
DDB1-215ENST00000539712 LMNB1P20700 586 aa21.94■■□□□ 1.1
DDB1-215ENST00000539712 PRPF40BQ6NWY9 871 aaKnown RBP21.94■■□□□ 1.1
DDB1-215ENST00000539712 CNKSR1Q969H4 720 aa21.94■■□□□ 1.1
DDB1-215ENST00000539712 CFAP44Q96MT7 982 aa21.94■■□□□ 1.1
DDB1-215ENST00000539712 LAS1LQ9Y4W2 734 aaKnown RBP21.94■■□□□ 1.1
DDB1-215ENST00000539712 SENP3-EIF4A1A0A087X0R7 540 aa21.93■■□□□ 1.1
DDB1-215ENST00000539712 GPTP24298 496 aa21.93■■□□□ 1.1
DDB1-215ENST00000539712 GIGYF2Q6Y7W6 1299 aaKnown RBP21.93■■□□□ 1.1
DDB1-215ENST00000539712 NECTIN2Q92692 538 aa21.93■■□□□ 1.1
DDB1-215ENST00000539712 ABCC12Q96J65 1359 aa21.93■■□□□ 1.1
DDB1-215ENST00000539712 ZNF219Q9P2Y4 722 aaPredicted RBP21.93■■□□□ 1.1
DDB1-215ENST00000539712 NPR1P16066 1061 aa21.92■■□□□ 1.1
DDB1-215ENST00000539712 SUSD4Q5VX71 490 aa21.92■■□□□ 1.1
DDB1-215ENST00000539712 NUTM1Q86Y26 1132 aa21.92■■□□□ 1.1
DDB1-215ENST00000539712 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
DDB1-215ENST00000539712 ERFEQ4G0M1 354 aa21.91■■□□□ 1.1
DDB1-215ENST00000539712 MBIPQ9NS73 344 aa21.91■■□□□ 1.1
DDB1-215ENST00000539712 ARFGEF2Q9Y6D5 1785 aa21.9■■□□□ 1.1
DDB1-215ENST00000539712 CRY2Q49AN0 593 aa21.9■■□□□ 1.1
DDB1-215ENST00000539712 COPS6Q7L5N1 327 aa21.9■■□□□ 1.1
DDB1-215ENST00000539712 DDX21Q9NR30 783 aaKnown RBP eCLIP21.9■■□□□ 1.1
DDB1-215ENST00000539712 TNRC6CQ9HCJ0 1690 aaKnown RBP21.9■■□□□ 1.1
DDB1-215ENST00000539712 IBTKQ9P2D0 1353 aaPredicted RBP21.89■■□□□ 1.1
DDB1-215ENST00000539712 ZC3H4Q9UPT8 1303 aaKnown RBP21.89■■□□□ 1.1
DDB1-215ENST00000539712 NTSR2O95665 410 aa21.89■■□□□ 1.09
DDB1-215ENST00000539712 XAGE3Q8WTP9 111 aa21.89■■□□□ 1.09
DDB1-215ENST00000539712 NYXQ9GZU5 481 aa21.89■■□□□ 1.09
DDB1-215ENST00000539712 CCDC88AQ3V6T2 1871 aa21.89■■□□□ 1.09
DDB1-215ENST00000539712 LTBP3Q9NS15 1303 aa21.88■■□□□ 1.09
DDB1-215ENST00000539712 HOXB7P09629 217 aa21.88■■□□□ 1.09
DDB1-215ENST00000539712 CHPF2Q9P2E5 772 aa21.88■■□□□ 1.09
DDB1-215ENST00000539712 GTF2E1P29083 439 aaPredicted RBP21.87■■□□□ 1.09
DDB1-215ENST00000539712 OLFM4Q6UX06 510 aa21.87■■□□□ 1.09
DDB1-215ENST00000539712 IFT57Q9NWB7 429 aa21.87■■□□□ 1.09
DDB1-215ENST00000539712 CACNA1SQ13698 1873 aa21.87■■□□□ 1.09
DDB1-215ENST00000539712 RIC1Q4ADV7 1423 aa21.87■■□□□ 1.09
DDB1-215ENST00000539712 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
DDB1-215ENST00000539712 TOMM70O94826 608 aa21.86■■□□□ 1.09
DDB1-215ENST00000539712 AIMP1Q12904 312 aaKnown RBP21.86■■□□□ 1.09
DDB1-215ENST00000539712 DUSP27Q5VZP5 1158 aa21.86■■□□□ 1.09
DDB1-215ENST00000539712 C3orf67Q6ZVT6 689 aa21.86■■□□□ 1.09
DDB1-215ENST00000539712 HDGFL1Q5TGJ6 251 aa21.85■■□□□ 1.09
DDB1-215ENST00000539712 TAOK3Q9H2K8 898 aa21.85■■□□□ 1.09
DDB1-215ENST00000539712 RRAGCQ9HB90 399 aa21.85■■□□□ 1.09
DDB1-215ENST00000539712 GLTPD2A6NH11 291 aa21.84■■□□□ 1.09
DDB1-215ENST00000539712 HOXA10P31260 410 aaPredicted RBP21.84■■□□□ 1.09
DDB1-215ENST00000539712 PARP10Q53GL7 1025 aa21.84■■□□□ 1.09
DDB1-215ENST00000539712 SLC10A5Q5PT55 438 aa21.84■■□□□ 1.09
DDB1-215ENST00000539712 SNED1Q8TER0 1413 aa21.83■■□□□ 1.09
DDB1-215ENST00000539712 HSPA6P17066 643 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms