RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, human

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENR-204	ENST00000539463	TTLL7	Q6ZT98	887 aa		33.74	■■■□□ 2.99
DENR-204	ENST00000539463	CNBD1	Q8NA66	436 aa		33.74	■■■□□ 2.99
DENR-204	ENST00000539463		H0YIN7	160 aa		33.73	■■■□□ 2.99
DENR-204	ENST00000539463	ERVV-1	B6SEH8	477 aa		33.72	■■■□□ 2.99
DENR-204	ENST00000539463	KRT24	Q2M2I5	525 aa		33.72	■■■□□ 2.99
DENR-204	ENST00000539463	CFAP44	Q96MT7	982 aa		33.72	■■■□□ 2.99
DENR-204	ENST00000539463	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.72	■■■□□ 2.99
DENR-204	ENST00000539463	NPHP1	O15259	732 aa		33.71	■■■□□ 2.99
DENR-204	ENST00000539463	PDE6B	P35913	854 aa		33.71	■■■□□ 2.99
DENR-204	ENST00000539463	PDIA6	Q15084	440 aa		33.71	■■■□□ 2.99
DENR-204	ENST00000539463	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.71	■■■□□ 2.99
DENR-204	ENST00000539463	KIF6	Q6ZMV9	814 aa		33.7	■■■□□ 2.99
DENR-204	ENST00000539463	MRS2	Q9HD23	443 aa		33.7	■■■□□ 2.99
DENR-204	ENST00000539463	MAP3K15	Q6ZN16	1313 aa		33.7	■■■□□ 2.99
DENR-204	ENST00000539463	ST5	P78524	1137 aa		33.69	■■■□□ 2.98
DENR-204	ENST00000539463	LRP10	Q7Z4F1	713 aa		33.69	■■■□□ 2.98
DENR-204	ENST00000539463	PDZRN3	Q9UPQ7	1066 aa		33.69	■■■□□ 2.98
DENR-204	ENST00000539463	ADCY9	O60503	1353 aa		33.69	■■■□□ 2.98
DENR-204	ENST00000539463	ARFGEF1	Q9Y6D6	1849 aa		33.68	■■■□□ 2.98
DENR-204	ENST00000539463	TTLL6	Q8N841	843 aa		33.68	■■■□□ 2.98
DENR-204	ENST00000539463	ANKRD31	Q8N7Z5	1873 aa		33.67	■■■□□ 2.98
DENR-204	ENST00000539463	ZNF853	P0CG23	659 aa		33.67	■■■□□ 2.98
DENR-204	ENST00000539463	PROSER3	Q2NL68	480 aa		33.67	■■■□□ 2.98
DENR-204	ENST00000539463	NECTIN2	Q92692	538 aa		33.67	■■■□□ 2.98
DENR-204	ENST00000539463	ATP10D	Q9P241	1426 aa		33.67	■■■□□ 2.98
DENR-204	ENST00000539463	ANXA1	P04083	346 aa		33.65	■■■□□ 2.98
DENR-204	ENST00000539463	CALD1	Q05682	793 aa	Known RBP	33.65	■■■□□ 2.98
DENR-204	ENST00000539463	TPTE2	Q6XPS3	522 aa		33.65	■■■□□ 2.98
DENR-204	ENST00000539463	ZBTB3	Q9H5J0	574 aa		33.65	■■■□□ 2.98
DENR-204	ENST00000539463	MBIP	Q9NS73	344 aa		33.65	■■■□□ 2.98
DENR-204	ENST00000539463	DLEC1	Q9Y238	1755 aa		33.65	■■■□□ 2.98
DENR-204	ENST00000539463	IFT57	Q9NWB7	429 aa		33.64	■■■□□ 2.98
DENR-204	ENST00000539463	FAM177B	A6PVY3	158 aa		33.63	■■■□□ 2.97
DENR-204	ENST00000539463	ZNF622	Q969S3	477 aa	Known RBP eCLIP	33.63	■■■□□ 2.97
DENR-204	ENST00000539463	HOXB7	P09629	217 aa		33.61	■■■□□ 2.97
DENR-204	ENST00000539463	GNAI1	P63096	354 aa		33.61	■■■□□ 2.97
DENR-204	ENST00000539463	SRGN	P10124	158 aa		33.6	■■■□□ 2.97
DENR-204	ENST00000539463	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.6	■■■□□ 2.97
DENR-204	ENST00000539463	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.59	■■■□□ 2.97
DENR-204	ENST00000539463	HDGFL1	Q5TGJ6	251 aa		33.58	■■■□□ 2.97
DENR-204	ENST00000539463	DUSP27	Q5VZP5	1158 aa		33.58	■■■□□ 2.97
DENR-204	ENST00000539463	COPS6	Q7L5N1	327 aa		33.58	■■■□□ 2.97
DENR-204	ENST00000539463	ZNF34	Q8IZ26	560 aa		33.58	■■■□□ 2.97
DENR-204	ENST00000539463	COL11A2	P13942	1736 aa	Predicted RBP	33.58	■■■□□ 2.97
DENR-204	ENST00000539463	NUP98	P52948	1817 aa		33.58	■■■□□ 2.97
DENR-204	ENST00000539463	SENP3-EIF4A1	A0A087X0R7	540 aa		33.57	■■■□□ 2.96
DENR-204	ENST00000539463	GPT	P24298	496 aa		33.57	■■■□□ 2.96
DENR-204	ENST00000539463	STYK1	Q6J9G0	422 aa		33.57	■■■□□ 2.96
DENR-204	ENST00000539463	CHPF2	Q9P2E5	772 aa		33.57	■■■□□ 2.96
DENR-204	ENST00000539463	UBN2	Q6ZU65	1347 aa		33.56	■■■□□ 2.96
DENR-204	ENST00000539463	KLRG2	A4D1S0	409 aa	Predicted RBP	33.56	■■■□□ 2.96
DENR-204	ENST00000539463	C9orf131	Q5VYM1	1079 aa		33.56	■■■□□ 2.96
DENR-204	ENST00000539463	ZNF526	Q8TF50	670 aa	Predicted RBP	33.56	■■■□□ 2.96
DENR-204	ENST00000539463	XAGE3	Q8WTP9	111 aa		33.56	■■■□□ 2.96
DENR-204	ENST00000539463	MASTL	Q96GX5	879 aa		33.56	■■■□□ 2.96
DENR-204	ENST00000539463	NYX	Q9GZU5	481 aa		33.56	■■■□□ 2.96
DENR-204	ENST00000539463	GTF2E1	P29083	439 aa	Predicted RBP	33.55	■■■□□ 2.96
DENR-204	ENST00000539463	AIMP1	Q12904	312 aa	Known RBP	33.55	■■■□□ 2.96
DENR-204	ENST00000539463	CCDC27	Q2M243	656 aa		33.55	■■■□□ 2.96
DENR-204	ENST00000539463	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.55	■■■□□ 2.96
DENR-204	ENST00000539463	CNKSR1	Q969H4	720 aa		33.54	■■■□□ 2.96
DENR-204	ENST00000539463	SUSD4	Q5VX71	490 aa		33.53	■■■□□ 2.96
DENR-204	ENST00000539463	NUTM1	Q86Y26	1132 aa		33.53	■■■□□ 2.96
DENR-204	ENST00000539463	WWC1	Q8IX03	1113 aa		33.52	■■■□□ 2.96
DENR-204	ENST00000539463	DBF4	Q9UBU7	674 aa	Predicted RBP	33.52	■■■□□ 2.96
DENR-204	ENST00000539463	C21orf2	O43822	256 aa		33.51	■■■□□ 2.95
DENR-204	ENST00000539463	RASSF7	Q02833	373 aa		33.51	■■■□□ 2.95
DENR-204	ENST00000539463	ERFE	Q4G0M1	354 aa		33.51	■■■□□ 2.95
DENR-204	ENST00000539463	RNF181	Q9P0P0	153 aa		33.51	■■■□□ 2.95
DENR-204	ENST00000539463	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.5	■■■□□ 2.95
DENR-204	ENST00000539463	NPR1	P16066	1061 aa		33.5	■■■□□ 2.95
DENR-204	ENST00000539463	NCBP3	Q53F19	620 aa	Known RBP	33.5	■■■□□ 2.95
DENR-204	ENST00000539463	PRPF40B	Q6NWY9	871 aa	Known RBP	33.5	■■■□□ 2.95
DENR-204	ENST00000539463	ZNF219	Q9P2Y4	722 aa	Predicted RBP	33.5	■■■□□ 2.95
DENR-204	ENST00000539463	ELL2	O00472	640 aa	Predicted RBP	33.49	■■■□□ 2.95
DENR-204	ENST00000539463	C8orf58	Q8NAV2	365 aa		33.49	■■■□□ 2.95
DENR-204	ENST00000539463	ABCC12	Q96J65	1359 aa		33.48	■■■□□ 2.95
DENR-204	ENST00000539463	NTSR2	O95665	410 aa		33.48	■■■□□ 2.95
DENR-204	ENST00000539463	PARP10	Q53GL7	1025 aa		33.48	■■■□□ 2.95
DENR-204	ENST00000539463	NFKBIE	O00221	500 aa		33.47	■■■□□ 2.95
DENR-204	ENST00000539463	PRELP	P51888	382 aa		33.47	■■■□□ 2.95
DENR-204	ENST00000539463	PPP1R42	Q7Z4L9	355 aa		33.47	■■■□□ 2.95
DENR-204	ENST00000539463	LMNB1	P20700	586 aa		33.46	■■■□□ 2.95
DENR-204	ENST00000539463	C1QTNF8	P60827	252 aa		33.46	■■■□□ 2.95
DENR-204	ENST00000539463	HSP90AB3P	Q58FF7	597 aa		33.46	■■■□□ 2.95
DENR-204	ENST00000539463	HYPK	Q9NX55	129 aa		33.46	■■■□□ 2.95
DENR-204	ENST00000539463	SLX4	Q8IY92	1834 aa		33.44	■■■□□ 2.94
DENR-204	ENST00000539463	TCIRG1	Q13488	830 aa		33.44	■■■□□ 2.94
DENR-204	ENST00000539463	CRY2	Q49AN0	593 aa		33.44	■■■□□ 2.94
DENR-204	ENST00000539463	TSR2	Q969E8	191 aa	Known RBP	33.44	■■■□□ 2.94
DENR-204	ENST00000539463	ANKRD13D	Q6ZTN6	518 aa		33.43	■■■□□ 2.94
DENR-204	ENST00000539463	PLBD2	Q8NHP8	589 aa		33.43	■■■□□ 2.94
DENR-204	ENST00000539463	C7orf43	Q8WVR3	580 aa		33.43	■■■□□ 2.94
DENR-204	ENST00000539463	UTP14A	Q9BVJ6	771 aa	Known RBP	33.43	■■■□□ 2.94
DENR-204	ENST00000539463	SBF1	O95248	1867 aa		33.43	■■■□□ 2.94
DENR-204	ENST00000539463	FAM9B	Q8IZU0	186 aa		33.42	■■■□□ 2.94
DENR-204	ENST00000539463	IL16	Q14005	1332 aa		33.42	■■■□□ 2.94
DENR-204	ENST00000539463	RIC1	Q4ADV7	1423 aa		33.42	■■■□□ 2.94
DENR-204	ENST00000539463	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.42	■■■□□ 2.94
DENR-204	ENST00000539463	NLRP10	Q86W26	655 aa		33.41	■■■□□ 2.94

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