RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 HLFQ16534 295 aa17.86■□□□□ 0.45
CD9-208ENST00000538834 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
CD9-208ENST00000538834 FAM9BQ8IZU0 186 aa17.86■□□□□ 0.45
CD9-208ENST00000538834 DDX21Q9NR30 783 aaKnown RBP eCLIP17.86■□□□□ 0.45
CD9-208ENST00000538834 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
CD9-208ENST00000538834 ATP10DQ9P241 1426 aa17.86■□□□□ 0.45
CD9-208ENST00000538834 DUSP27Q5VZP5 1158 aa17.85■□□□□ 0.45
CD9-208ENST00000538834 CARMIL3Q8ND23 1372 aa17.85■□□□□ 0.45
CD9-208ENST00000538834 LAS1LQ9Y4W2 734 aaKnown RBP17.85■□□□□ 0.45
CD9-208ENST00000538834 C8orf58Q8NAV2 365 aa17.84■□□□□ 0.45
CD9-208ENST00000538834 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
CD9-208ENST00000538834 EIF2S2P20042 333 aaKnown RBP17.83■□□□□ 0.44
CD9-208ENST00000538834 KLHL34Q8N239 644 aa17.83■□□□□ 0.44
CD9-208ENST00000538834 CACNA1SQ13698 1873 aa17.82■□□□□ 0.44
CD9-208ENST00000538834 MYL6BP14649 208 aa17.82■□□□□ 0.44
CD9-208ENST00000538834 DPEP1P16444 411 aa17.82■□□□□ 0.44
CD9-208ENST00000538834 PRR5LQ6MZQ0 368 aa17.82■□□□□ 0.44
CD9-208ENST00000538834 GIGYF2Q6Y7W6 1299 aaKnown RBP17.82■□□□□ 0.44
CD9-208ENST00000538834 ZNF34Q8IZ26 560 aa17.82■□□□□ 0.44
CD9-208ENST00000538834 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
CD9-208ENST00000538834 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
CD9-208ENST00000538834 CCDC88AQ3V6T2 1871 aa17.82■□□□□ 0.44
CD9-208ENST00000538834 LAMB2P55268 1798 aa17.81■□□□□ 0.44
CD9-208ENST00000538834 A0A0G2JLW4 131 aa17.81■□□□□ 0.44
CD9-208ENST00000538834 ANXA1P04083 346 aa17.81■□□□□ 0.44
CD9-208ENST00000538834 DIEXFQ68CQ4 756 aaKnown RBP17.81■□□□□ 0.44
CD9-208ENST00000538834 NPM2Q86SE8 214 aaKnown RBP17.81■□□□□ 0.44
CD9-208ENST00000538834 SETDB2Q96T68 719 aa17.81■□□□□ 0.44
CD9-208ENST00000538834 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
CD9-208ENST00000538834 IBTKQ9P2D0 1353 aaPredicted RBP17.8■□□□□ 0.44
CD9-208ENST00000538834 SLX4Q8IY92 1834 aa17.8■□□□□ 0.44
CD9-208ENST00000538834 SENP3-EIF4A1A0A087X0R7 540 aa17.8■□□□□ 0.44
CD9-208ENST00000538834 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
CD9-208ENST00000538834 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
CD9-208ENST00000538834 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
CD9-208ENST00000538834 TSR2Q969E8 191 aaKnown RBP17.8■□□□□ 0.44
CD9-208ENST00000538834 BRIP1Q9BX63 1249 aa17.8■□□□□ 0.44
CD9-208ENST00000538834 CHPF2Q9P2E5 772 aa17.8■□□□□ 0.44
CD9-208ENST00000538834 DBF4Q9UBU7 674 aaPredicted RBP17.8■□□□□ 0.44
CD9-208ENST00000538834 RIC1Q4ADV7 1423 aa17.8■□□□□ 0.44
CD9-208ENST00000538834 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
CD9-208ENST00000538834 COPS6Q7L5N1 327 aa17.79■□□□□ 0.44
CD9-208ENST00000538834 TNRC6CQ9HCJ0 1690 aaKnown RBP17.79■□□□□ 0.44
CD9-208ENST00000538834 UBN2Q6ZU65 1347 aa17.78■□□□□ 0.44
CD9-208ENST00000538834 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
CD9-208ENST00000538834 GRIN3BO60391 1043 aa17.78■□□□□ 0.44
CD9-208ENST00000538834 GPR162Q16538 588 aa17.78■□□□□ 0.44
CD9-208ENST00000538834 NIP7Q9Y221 180 aaKnown RBP eCLIP17.78■□□□□ 0.44
CD9-208ENST00000538834 DICER1Q9UPY3 1922 aaKnown RBP17.77■□□□□ 0.44
CD9-208ENST00000538834 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
CD9-208ENST00000538834 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.44
CD9-208ENST00000538834 MIER1Q8N108 512 aa17.77■□□□□ 0.44
CD9-208ENST00000538834 XAGE3Q8WTP9 111 aa17.77■□□□□ 0.44
CD9-208ENST00000538834 NECTIN2Q92692 538 aa17.77■□□□□ 0.44
CD9-208ENST00000538834 HYPKQ9NX55 129 aa17.77■□□□□ 0.44
CD9-208ENST00000538834 PDZRN3Q9UPQ7 1066 aa17.77■□□□□ 0.44
CD9-208ENST00000538834 DDX60Q8IY21 1712 aaKnown RBP17.77■□□□□ 0.44
CD9-208ENST00000538834 CHRNA5P30532 468 aa17.76■□□□□ 0.43
CD9-208ENST00000538834 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
CD9-208ENST00000538834 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
CD9-208ENST00000538834 VAMP4O75379 141 aa17.75■□□□□ 0.43
CD9-208ENST00000538834 CNBD1Q8NA66 436 aa17.75■□□□□ 0.43
CD9-208ENST00000538834 PLBD2Q8NHP8 589 aa17.75■□□□□ 0.43
CD9-208ENST00000538834 CHMP4AQ9BY43 222 aa17.75■□□□□ 0.43
CD9-208ENST00000538834 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
CD9-208ENST00000538834 NTSR2O95665 410 aa17.74■□□□□ 0.43
CD9-208ENST00000538834 TCIRG1Q13488 830 aa17.74■□□□□ 0.43
CD9-208ENST00000538834 TWISTNBQ3B726 338 aaPredicted RBP17.74■□□□□ 0.43
CD9-208ENST00000538834 TPTE2Q6XPS3 522 aa17.74■□□□□ 0.43
CD9-208ENST00000538834 TRMT2AQ8IZ69 625 aaKnown RBP17.74■□□□□ 0.43
CD9-208ENST00000538834 SALL2Q9Y467 1007 aaPredicted RBP17.74■□□□□ 0.43
CD9-208ENST00000538834 SRGNP10124 158 aa17.73■□□□□ 0.43
CD9-208ENST00000538834 PDE6BP35913 854 aa17.73■□□□□ 0.43
CD9-208ENST00000538834 TRIM28Q13263 835 aaKnown RBP17.73■□□□□ 0.43
CD9-208ENST00000538834 CCDC30Q5VVM6 783 aa17.73■□□□□ 0.43
CD9-208ENST00000538834 SUSD4Q5VX71 490 aa17.73■□□□□ 0.43
CD9-208ENST00000538834 ANKRD13DQ6ZTN6 518 aa17.73■□□□□ 0.43
CD9-208ENST00000538834 NBPF5PQ86XG9 351 aaPredicted RBP17.73■□□□□ 0.43
CD9-208ENST00000538834 ISCA1Q9BUE6 129 aa17.73■□□□□ 0.43
CD9-208ENST00000538834 PHAXQ9H814 394 aaKnown RBP17.73■□□□□ 0.43
CD9-208ENST00000538834 TAF1P21675 1872 aa17.72■□□□□ 0.43
CD9-208ENST00000538834 CRY2Q49AN0 593 aa17.72■□□□□ 0.43
CD9-208ENST00000538834 PARP10Q53GL7 1025 aa17.72■□□□□ 0.43
CD9-208ENST00000538834 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
CD9-208ENST00000538834 MYH3P11055 1940 aa17.71■□□□□ 0.43
CD9-208ENST00000538834 ABCC12Q96J65 1359 aa17.71■□□□□ 0.43
CD9-208ENST00000538834 H0YIN7 160 aa17.71■□□□□ 0.43
CD9-208ENST00000538834 EXOSC9Q06265 439 aaKnown RBP17.71■□□□□ 0.43
CD9-208ENST00000538834 HSP90AB3PQ58FF7 597 aa17.71■□□□□ 0.43
CD9-208ENST00000538834 NLRP10Q86W26 655 aa17.71■□□□□ 0.43
CD9-208ENST00000538834 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.43
CD9-208ENST00000538834 CCDC24Q8N4L8 307 aa17.71■□□□□ 0.43
CD9-208ENST00000538834 NYXQ9GZU5 481 aa17.71■□□□□ 0.43
CD9-208ENST00000538834 RNF123Q5XPI4 1314 aa17.71■□□□□ 0.42
CD9-208ENST00000538834 ADCY9O60503 1353 aa17.7■□□□□ 0.42
CD9-208ENST00000538834 ST5P78524 1137 aa17.7■□□□□ 0.42
CD9-208ENST00000538834 GOLGA2Q08379 1002 aa17.7■□□□□ 0.42
CD9-208ENST00000538834 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
CD9-208ENST00000538834 DALRD3Q5D0E6 543 aaKnown RBP17.7■□□□□ 0.42
CD9-208ENST00000538834 GPTP24298 496 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms