RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SKILP12757 684 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 SH3BGRP55822 239 aaPredicted RBP7.95□□□□□ -1.14
SORT1-209ENST00000538502 KIF4AO95239 1232 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 MAP4K4O95819 1239 aaPredicted RBP7.95□□□□□ -1.14
SORT1-209ENST00000538502 KRT83P78385 493 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 KCNG4Q8TDN1 519 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 NUTM2FA1L443 756 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 MAPK8IP2Q13387 824 aaPredicted RBP7.95□□□□□ -1.14
SORT1-209ENST00000538502 CCDC6Q16204 474 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 SMC5Q8IY18 1101 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 CETN1Q12798 172 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 RAB3GAP1Q15042 981 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 CCDC102BQ68D86 513 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 TBC1D9Q6ZT07 1266 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 RNF41Q9H4P4 317 aaPredicted RBP7.95□□□□□ -1.14
SORT1-209ENST00000538502 AQRO60306 1485 aaKnown RBP eCLIP7.95□□□□□ -1.141e-6■■■■□ 20.3
SORT1-209ENST00000538502 KDM4AO75164 1064 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 SEPT6Q14141 434 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 NBPF8Q3BBV2 869 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 TTC22Q5TAA0 569 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 TSGA10Q9BZW7 698 aa7.95□□□□□ -1.14
SORT1-209ENST00000538502 TNIP1Q15025 636 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 TRERF1Q96PN7 1200 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 CEP126Q9P2H0 1117 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 FBF1Q8TES7 1133 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 CCDC77Q9BR77 488 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 NSD3Q9BZ95 1437 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 UBASH3AP57075 661 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 STXBP4Q6ZWJ1 553 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 CKAP2LQ8IYA6 745 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 LMBR1Q8WVP7 490 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 SEC63Q9UGP8 760 aaKnown RBP7.94□□□□□ -1.14
SORT1-209ENST00000538502 TOP2BQ02880 1626 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 NUCB1Q02818 461 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 ATL3Q6DD88 541 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 JADE2Q9NQC1 790 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 SPG7Q9UQ90 795 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 RALGAPBQ86X10 1494 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 NCAPD3P42695 1498 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 CEP128Q6ZU80 1094 aa7.94□□□□□ -1.14
SORT1-209ENST00000538502 TACC1O75410 805 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 FERP16591 822 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 TATP17735 454 aaPredicted RBP7.93□□□□□ -1.14
SORT1-209ENST00000538502 MTIF2P46199 727 aaKnown RBP7.93□□□□□ -1.14
SORT1-209ENST00000538502 TDRD12Q587J7 1177 aaKnown RBP7.93□□□□□ -1.14
SORT1-209ENST00000538502 FAM76AQ8TAV0 307 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 ARHGAP45Q92619 1136 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 SWAP70Q9UH65 585 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 NEBLO76041 1014 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 AIDAQ96BJ3 306 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 CEP83Q9Y592 693 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 HMGB2P26583 209 aaKnown RBP7.93□□□□□ -1.14
SORT1-209ENST00000538502 UBE4AQ14139 1066 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 IFT74Q96LB3 600 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 PTPN23Q9H3S7 1636 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 KIAA0753Q2KHM9 967 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 ANKRD24Q8TF21 1146 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 MKRN1Q9UHC7 482 aaKnown RBP7.93□□□□□ -1.14
SORT1-209ENST00000538502 KIF3CO14782 793 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 ANO6Q4KMQ2 910 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 AEBP2Q6ZN18 517 aaPredicted RBP7.93□□□□□ -1.14
SORT1-209ENST00000538502 CROCCP2Q86T23 111 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 FMNL3Q8IVF7 1028 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 CALML4Q96GE6 196 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 INTS4Q96HW7 963 aaKnown RBP7.93□□□□□ -1.14
SORT1-209ENST00000538502 FERMT1Q9BQL6 677 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
SORT1-209ENST00000538502 NOL3O60936 208 aaKnown RBP7.92□□□□□ -1.14
SORT1-209ENST00000538502 LACTBP83111 547 aaPredicted RBP7.92□□□□□ -1.14
SORT1-209ENST00000538502 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.92□□□□□ -1.14
SORT1-209ENST00000538502 ATP5DP30049 168 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 SULT6B1Q6IMI4 303 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 FERMT3Q86UX7 667 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 TSNARE1Q96NA8 513 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 DNAI1Q9UI46 699 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 SLC12A7Q9Y666 1083 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 NLRP6P59044 892 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 DUSP27Q5VZP5 1158 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 KLHL10Q6JEL2 608 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 MYRIPQ8NFW9 859 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 RBM27Q9P2N5 1060 aaKnown RBP7.92□□□□□ -1.14
SORT1-209ENST00000538502 PRXQ9BXM0 1461 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 KRT86O43790 486 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 HCLS1P14317 486 aaPredicted RBP7.92□□□□□ -1.14
SORT1-209ENST00000538502 ARHGAP25P42331 645 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 FKBP4Q02790 459 aaKnown RBP eCLIP7.92□□□□□ -1.14
SORT1-209ENST00000538502 KRI1Q8N9T8 703 aaKnown RBP7.92□□□□□ -1.14
SORT1-209ENST00000538502 PAIP2Q9BPZ3 127 aaKnown RBP7.92□□□□□ -1.14
SORT1-209ENST00000538502 RTEL1-TNFRSF6BF6WH68 1400 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 TTC21AQ8NDW8 1320 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 SSBP05455 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
SORT1-209ENST00000538502 VAV2P52735 878 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 DNAJC21Q5F1R6 531 aaKnown RBP7.92□□□□□ -1.14
SORT1-209ENST00000538502 CCDC186Q7Z3E2 898 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 LMNTD2Q8IXW0 634 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 TRIM7Q9C029 511 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 VPS18Q9P253 973 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 ZNF76P36508 570 aa7.92□□□□□ -1.14
SORT1-209ENST00000538502 SARNPP82979 210 aaKnown RBP7.92□□□□□ -1.14
SORT1-209ENST00000538502 CCDC114Q96M63 670 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms