RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
COPS7A-207ENST00000538375 CHPF2Q9P2E5 772 aa17.06■□□□□ 0.32
COPS7A-207ENST00000538375 PDIA6Q15084 440 aa17.05■□□□□ 0.32
COPS7A-207ENST00000538375 GPR162Q16538 588 aa17.05■□□□□ 0.32
COPS7A-207ENST00000538375 COPS6Q7L5N1 327 aa17.05■□□□□ 0.32
COPS7A-207ENST00000538375 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
COPS7A-207ENST00000538375 DDX21Q9NR30 783 aaKnown RBP eCLIP17.05■□□□□ 0.32
COPS7A-207ENST00000538375 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-207ENST00000538375 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
COPS7A-207ENST00000538375 FAM177BA6PVY3 158 aa17.04■□□□□ 0.32
COPS7A-207ENST00000538375 HLFQ16534 295 aa17.04■□□□□ 0.32
COPS7A-207ENST00000538375 CLEC4GQ6UXB4 293 aa17.04■□□□□ 0.32
COPS7A-207ENST00000538375 XAGE3Q8WTP9 111 aa17.04■□□□□ 0.32
COPS7A-207ENST00000538375 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
COPS7A-207ENST00000538375 WWC3Q9ULE0 1092 aa17.04■□□□□ 0.32
COPS7A-207ENST00000538375 MAP3K15Q6ZN16 1313 aa17.03■□□□□ 0.32
COPS7A-207ENST00000538375 FANCIQ9NVI1 1328 aa17.03■□□□□ 0.32
COPS7A-207ENST00000538375 C1QTNF8P60827 252 aa17.03■□□□□ 0.32
COPS7A-207ENST00000538375 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
COPS7A-207ENST00000538375 CHMP4AQ9BY43 222 aa17.03■□□□□ 0.32
COPS7A-207ENST00000538375 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
COPS7A-207ENST00000538375 NIP7Q9Y221 180 aaKnown RBP eCLIP17.03■□□□□ 0.32
COPS7A-207ENST00000538375 ERVV-1B6SEH8 477 aa17.02■□□□□ 0.32
COPS7A-207ENST00000538375 TCERG1O14776 1098 aaKnown RBP17.02■□□□□ 0.32
COPS7A-207ENST00000538375 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
COPS7A-207ENST00000538375 CCDC30Q5VVM6 783 aa17.02■□□□□ 0.32
COPS7A-207ENST00000538375 CCDC24Q8N4L8 307 aa17.02■□□□□ 0.32
COPS7A-207ENST00000538375 HYPKQ9NX55 129 aa17.02■□□□□ 0.32
COPS7A-207ENST00000538375 A0A0G2JLW4 131 aa17.01■□□□□ 0.31
COPS7A-207ENST00000538375 YBX3P16989 372 aaKnown RBP eCLIP17■□□□□ 0.31
COPS7A-207ENST00000538375 GPTP24298 496 aa17■□□□□ 0.31
COPS7A-207ENST00000538375 GTF2E1P29083 439 aaPredicted RBP17■□□□□ 0.31
COPS7A-207ENST00000538375 TGFB2P61812 414 aa17■□□□□ 0.31
COPS7A-207ENST00000538375 NBPF5PQ86XG9 351 aaPredicted RBP17■□□□□ 0.31
COPS7A-207ENST00000538375 STK31Q9BXU1 1019 aa17■□□□□ 0.31
COPS7A-207ENST00000538375 CHD4Q14839 1912 aa17■□□□□ 0.31
COPS7A-207ENST00000538375 DPEP1P16444 411 aa16.99■□□□□ 0.31
COPS7A-207ENST00000538375 LRP10Q7Z4F1 713 aa16.99■□□□□ 0.31
COPS7A-207ENST00000538375 CARMIL3Q8ND23 1372 aa16.99■□□□□ 0.31
COPS7A-207ENST00000538375 RGL2O15211 777 aa16.98■□□□□ 0.31
COPS7A-207ENST00000538375 TPTE2Q6XPS3 522 aa16.98■□□□□ 0.31
COPS7A-207ENST00000538375 GIGYF2Q6Y7W6 1299 aaKnown RBP16.98■□□□□ 0.31
COPS7A-207ENST00000538375 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
COPS7A-207ENST00000538375 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
COPS7A-207ENST00000538375 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
COPS7A-207ENST00000538375 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
COPS7A-207ENST00000538375 GRIN3BO60391 1043 aa16.97■□□□□ 0.31
COPS7A-207ENST00000538375 ST5P78524 1137 aa16.97■□□□□ 0.31
COPS7A-207ENST00000538375 PRR5LQ6MZQ0 368 aa16.97■□□□□ 0.31
COPS7A-207ENST00000538375 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
COPS7A-207ENST00000538375 E9PSI1 815 aa16.96■□□□□ 0.31
COPS7A-207ENST00000538375 VAMP4O75379 141 aa16.96■□□□□ 0.31
COPS7A-207ENST00000538375 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
COPS7A-207ENST00000538375 CHRNA5P30532 468 aa16.96■□□□□ 0.31
COPS7A-207ENST00000538375 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
COPS7A-207ENST00000538375 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
COPS7A-207ENST00000538375 CDCA7LQ96GN5 454 aa16.96■□□□□ 0.31
COPS7A-207ENST00000538375 SCN7AQ01118 1682 aa16.96■□□□□ 0.31
COPS7A-207ENST00000538375 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.3
COPS7A-207ENST00000538375 H0YIN7 160 aa16.95■□□□□ 0.3
COPS7A-207ENST00000538375 HSP90AB3PQ58FF7 597 aa16.95■□□□□ 0.3
COPS7A-207ENST00000538375 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
COPS7A-207ENST00000538375 ZNF34Q8IZ26 560 aa16.95■□□□□ 0.3
COPS7A-207ENST00000538375 ZNF428Q96B54 188 aa16.95■□□□□ 0.3
COPS7A-207ENST00000538375 BCS1LQ9Y276 419 aa16.95■□□□□ 0.3
COPS7A-207ENST00000538375 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
COPS7A-207ENST00000538375 PDE6BP35913 854 aa16.94■□□□□ 0.3
COPS7A-207ENST00000538375 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
COPS7A-207ENST00000538375 TCIRG1Q13488 830 aa16.94■□□□□ 0.3
COPS7A-207ENST00000538375 SUSD4Q5VX71 490 aa16.94■□□□□ 0.3
COPS7A-207ENST00000538375 BRIP1Q9BX63 1249 aa16.94■□□□□ 0.3
COPS7A-207ENST00000538375 NYXQ9GZU5 481 aa16.94■□□□□ 0.3
COPS7A-207ENST00000538375 PIM2Q9P1W9 311 aa16.94■□□□□ 0.3
COPS7A-207ENST00000538375 BCORQ6W2J9 1755 aa16.93■□□□□ 0.3
COPS7A-207ENST00000538375 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
COPS7A-207ENST00000538375 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
COPS7A-207ENST00000538375 ATP5J2-PTCD1G3V325 749 aa16.92■□□□□ 0.3
COPS7A-207ENST00000538375 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
COPS7A-207ENST00000538375 ZNF622Q969S3 477 aaKnown RBP eCLIP16.92■□□□□ 0.3
COPS7A-207ENST00000538375 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
COPS7A-207ENST00000538375 AFDNP55196 1824 aaKnown RBP16.91■□□□□ 0.3
COPS7A-207ENST00000538375 KCNA3P22001 575 aa16.91■□□□□ 0.3
COPS7A-207ENST00000538375 ERFEQ4G0M1 354 aa16.91■□□□□ 0.3
COPS7A-207ENST00000538375 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
COPS7A-207ENST00000538375 G2E3Q7L622 706 aa16.91■□□□□ 0.3
COPS7A-207ENST00000538375 UTP14AQ9BVJ6 771 aaKnown RBP16.91■□□□□ 0.3
COPS7A-207ENST00000538375 UBN2Q6ZU65 1347 aa16.91■□□□□ 0.3
COPS7A-207ENST00000538375 ATP10DQ9P241 1426 aa16.9■□□□□ 0.3
COPS7A-207ENST00000538375 MYD88Q99836 296 aa16.9■□□□□ 0.3
COPS7A-207ENST00000538375 TRMT112Q9UI30 125 aaKnown RBP16.9■□□□□ 0.3
COPS7A-207ENST00000538375 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
COPS7A-207ENST00000538375 NUP98P52948 1817 aa16.9■□□□□ 0.3
COPS7A-207ENST00000538375 N4BP2Q86UW6 1770 aaPredicted RBP16.89■□□□□ 0.3
COPS7A-207ENST00000538375 KSR2Q6VAB6 950 aa16.89■□□□□ 0.29
COPS7A-207ENST00000538375 NLRP10Q86W26 655 aa16.89■□□□□ 0.29
COPS7A-207ENST00000538375 PDZRN3Q9UPQ7 1066 aa16.89■□□□□ 0.29
COPS7A-207ENST00000538375 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
COPS7A-207ENST00000538375 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
COPS7A-207ENST00000538375 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
COPS7A-207ENST00000538375 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms