RNA–Protein interactions for RNA: ENST00000537880.1

TCHP-205, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 2,817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-205ENST00000537880 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
TCHP-205ENST00000537880 IGSF3O75054 1194 aa13.53□□□□□ -0.24
TCHP-205ENST00000537880 DDB1Q16531 1140 aa13.53□□□□□ -0.24
TCHP-205ENST00000537880 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
TCHP-205ENST00000537880 DDIT3P35638 169 aa13.53□□□□□ -0.24
TCHP-205ENST00000537880 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
TCHP-205ENST00000537880 SKOR2Q2VWA4 1001 aaPredicted RBP13.53□□□□□ -0.24
TCHP-205ENST00000537880 NFATC2IPQ8NCF5 419 aa13.53□□□□□ -0.24
TCHP-205ENST00000537880 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
TCHP-205ENST00000537880 TNS1Q9HBL0 1735 aaKnown RBP13.52□□□□□ -0.24
TCHP-205ENST00000537880 ZNF790Q6PG37 636 aa13.52□□□□□ -0.24
TCHP-205ENST00000537880 C22orf23Q9BZE7 217 aa13.52□□□□□ -0.24
TCHP-205ENST00000537880 CGNQ9P2M7 1197 aaKnown RBP13.52□□□□□ -0.24
TCHP-205ENST00000537880 PXDNLA1KZ92 1463 aa13.52□□□□□ -0.25
TCHP-205ENST00000537880 HS1BP3Q53T59 392 aa13.52□□□□□ -0.25
TCHP-205ENST00000537880 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
TCHP-205ENST00000537880 KIF16BQ96L93 1317 aa13.52□□□□□ -0.25
TCHP-205ENST00000537880 MFAP1P55081 439 aaKnown RBP13.51□□□□□ -0.25
TCHP-205ENST00000537880 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
TCHP-205ENST00000537880 CSPP1Q1MSJ5 1256 aa13.51□□□□□ -0.25
TCHP-205ENST00000537880 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
TCHP-205ENST00000537880 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
TCHP-205ENST00000537880 GBP4Q96PP9 640 aa13.51□□□□□ -0.25
TCHP-205ENST00000537880 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
TCHP-205ENST00000537880 ZKSCAN5Q9Y2L8 839 aa13.51□□□□□ -0.25
TCHP-205ENST00000537880 CABP4P57796 275 aa13.5□□□□□ -0.25
TCHP-205ENST00000537880 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
TCHP-205ENST00000537880 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
TCHP-205ENST00000537880 COG6Q9Y2V7 657 aa13.5□□□□□ -0.25
TCHP-205ENST00000537880 GIGYF1O75420 1035 aaPredicted RBP13.5□□□□□ -0.25
TCHP-205ENST00000537880 SMC4Q9NTJ3 1288 aa13.49□□□□□ -0.25
TCHP-205ENST00000537880 BCORQ6W2J9 1755 aa13.49□□□□□ -0.25
TCHP-205ENST00000537880 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
TCHP-205ENST00000537880 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
TCHP-205ENST00000537880 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
TCHP-205ENST00000537880 CCDC9Q9Y3X0 531 aaKnown RBP13.49□□□□□ -0.25
TCHP-205ENST00000537880 FAM177BA6PVY3 158 aa13.48□□□□□ -0.25
TCHP-205ENST00000537880 CDK11BP21127 795 aaKnown RBP13.48□□□□□ -0.25
TCHP-205ENST00000537880 PIGBQ92521 554 aa13.48□□□□□ -0.25
TCHP-205ENST00000537880 ABCC4O15439 1325 aa13.48□□□□□ -0.25
TCHP-205ENST00000537880 RAB3GAP1Q15042 981 aa13.48□□□□□ -0.25
TCHP-205ENST00000537880 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
TCHP-205ENST00000537880 PDLIM2Q96JY6 352 aa13.48□□□□□ -0.25
TCHP-205ENST00000537880 MYH14Q7Z406 1995 aaKnown RBP13.48□□□□□ -0.25
TCHP-205ENST00000537880 QTRT2Q9H974 415 aaKnown RBP13.47□□□□□ -0.25
TCHP-205ENST00000537880 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
TCHP-205ENST00000537880 SLC39A6Q13433 755 aa13.47□□□□□ -0.25
TCHP-205ENST00000537880 DNTTIP2Q5QJE6 756 aaKnown RBP13.47□□□□□ -0.25
TCHP-205ENST00000537880 ZNF496Q96IT1 587 aaPredicted RBP13.47□□□□□ -0.25
TCHP-205ENST00000537880 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
TCHP-205ENST00000537880 TMOD3Q9NYL9 352 aa13.47□□□□□ -0.25
TCHP-205ENST00000537880 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
TCHP-205ENST00000537880 PTPRCP08575 1304 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 ZKSCAN2Q63HK3 967 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 MYRIPQ8NFW9 859 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 NOB1Q9ULX3 412 aaKnown RBP13.46□□□□□ -0.25
TCHP-205ENST00000537880 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 TRIM27P14373 513 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 FMNL2Q96PY5 1086 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 RBSNQ9H1K0 784 aa13.46□□□□□ -0.25
TCHP-205ENST00000537880 DDX49Q9Y6V7 483 aaKnown RBP13.46□□□□□ -0.25
TCHP-205ENST00000537880 CHMP4AQ9BY43 222 aa13.45□□□□□ -0.26
TCHP-205ENST00000537880 IBTKQ9P2D0 1353 aaPredicted RBP13.45□□□□□ -0.26
TCHP-205ENST00000537880 RLBP1P12271 317 aa13.45□□□□□ -0.26
TCHP-205ENST00000537880 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
TCHP-205ENST00000537880 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
TCHP-205ENST00000537880 PDIA6Q15084 440 aa13.45□□□□□ -0.26
TCHP-205ENST00000537880 TAF3Q5VWG9 929 aa13.45□□□□□ -0.26
TCHP-205ENST00000537880 NUP98P52948 1817 aa13.44□□□□□ -0.26
TCHP-205ENST00000537880 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
TCHP-205ENST00000537880 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
TCHP-205ENST00000537880 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
TCHP-205ENST00000537880 SCN7AQ01118 1682 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 IPO8O15397 1037 aaKnown RBP13.43□□□□□ -0.26
TCHP-205ENST00000537880 RBM6P78332 1123 aaKnown RBP13.43□□□□□ -0.26
TCHP-205ENST00000537880 KLHL40Q2TBA0 621 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 SMC5Q8IY18 1101 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 TTC5Q8N0Z6 440 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 C4AP0C0L4 1744 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
TCHP-205ENST00000537880 ASAP1Q9ULH1 1129 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
TCHP-205ENST00000537880 ATP10DQ9P241 1426 aa13.42□□□□□ -0.26
TCHP-205ENST00000537880 PTMSP20962 102 aa13.42□□□□□ -0.26
TCHP-205ENST00000537880 SSFA2P28290 1259 aa13.42□□□□□ -0.26
TCHP-205ENST00000537880 MCM5P33992 734 aa13.42□□□□□ -0.26
TCHP-205ENST00000537880 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
TCHP-205ENST00000537880 CIZ1Q9ULV3 898 aaPredicted RBP13.42□□□□□ -0.26
TCHP-205ENST00000537880 CASZ1Q86V15 1759 aa13.42□□□□□ -0.26
TCHP-205ENST00000537880 G2E3Q7L622 706 aa13.42□□□□□ -0.26
TCHP-205ENST00000537880 DZIP1LQ8IYY4 767 aaKnown RBP13.42□□□□□ -0.26
TCHP-205ENST00000537880 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
TCHP-205ENST00000537880 ZNF445P59923 1031 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms