RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 LRP10Q7Z4F1 713 aa22.53■■□□□ 1.2
GPN3-202ENST00000537466 SALL2Q9Y467 1007 aaPredicted RBP22.53■■□□□ 1.2
GPN3-202ENST00000537466 CARMIL3Q8ND23 1372 aa22.52■■□□□ 1.2
GPN3-202ENST00000537466 DPEP1P16444 411 aa22.52■■□□□ 1.2
GPN3-202ENST00000537466 HLFQ16534 295 aa22.52■■□□□ 1.2
GPN3-202ENST00000537466 CLEC4GQ6UXB4 293 aa22.52■■□□□ 1.2
GPN3-202ENST00000537466 NCBP3Q53F19 620 aaKnown RBP22.51■■□□□ 1.19
GPN3-202ENST00000537466 SETDB2Q96T68 719 aa22.51■■□□□ 1.19
GPN3-202ENST00000537466 ZNF652Q9Y2D9 606 aa22.51■■□□□ 1.19
GPN3-202ENST00000537466 ARFGEF1Q9Y6D6 1849 aa22.5■■□□□ 1.19
GPN3-202ENST00000537466 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
GPN3-202ENST00000537466 MAP3K15Q6ZN16 1313 aa22.5■■□□□ 1.19
GPN3-202ENST00000537466 HOXB7P09629 217 aa22.49■■□□□ 1.19
GPN3-202ENST00000537466 KCNA3P22001 575 aa22.49■■□□□ 1.19
GPN3-202ENST00000537466 COL11A2P13942 1736 aaPredicted RBP22.49■■□□□ 1.19
GPN3-202ENST00000537466 ANKRD36CQ5JPF3 1778 aa22.49■■□□□ 1.19
GPN3-202ENST00000537466 RGL2O15211 777 aa22.48■■□□□ 1.19
GPN3-202ENST00000537466 CHRNA5P30532 468 aa22.48■■□□□ 1.19
GPN3-202ENST00000537466 HDGFL1Q5TGJ6 251 aa22.48■■□□□ 1.19
GPN3-202ENST00000537466 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
GPN3-202ENST00000537466 CCDC24Q8N4L8 307 aa22.48■■□□□ 1.19
GPN3-202ENST00000537466 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
GPN3-202ENST00000537466 ZBTB3Q9H5J0 574 aa22.48■■□□□ 1.19
GPN3-202ENST00000537466 ERVV-1B6SEH8 477 aa22.47■■□□□ 1.19
GPN3-202ENST00000537466 PRR5LQ6MZQ0 368 aa22.47■■□□□ 1.19
GPN3-202ENST00000537466 CHPF2Q9P2E5 772 aa22.47■■□□□ 1.19
GPN3-202ENST00000537466 ELL2O00472 640 aaPredicted RBP22.47■■□□□ 1.19
GPN3-202ENST00000537466 C8orf58Q8NAV2 365 aa22.47■■□□□ 1.19
GPN3-202ENST00000537466 DDX21Q9NR30 783 aaKnown RBP eCLIP22.47■■□□□ 1.19
GPN3-202ENST00000537466 NIP7Q9Y221 180 aaKnown RBP eCLIP22.47■■□□□ 1.19
GPN3-202ENST00000537466 GRIN3BO60391 1043 aa22.46■■□□□ 1.19
GPN3-202ENST00000537466 CACNA1SQ13698 1873 aa22.45■■□□□ 1.19
GPN3-202ENST00000537466 IL16Q14005 1332 aa22.45■■□□□ 1.18
GPN3-202ENST00000537466 YY1P25490 414 aa22.45■■□□□ 1.18
GPN3-202ENST00000537466 ATP10DQ9P241 1426 aa22.44■■□□□ 1.18
GPN3-202ENST00000537466 CCER2I3L3R5 266 aa22.44■■□□□ 1.18
GPN3-202ENST00000537466 COPS6Q7L5N1 327 aa22.44■■□□□ 1.18
GPN3-202ENST00000537466 TSPYL6Q8N831 410 aa22.44■■□□□ 1.18
GPN3-202ENST00000537466 CNBD1Q8NA66 436 aa22.44■■□□□ 1.18
GPN3-202ENST00000537466 XAGE3Q8WTP9 111 aa22.44■■□□□ 1.18
GPN3-202ENST00000537466 BCS1LQ9Y276 419 aa22.44■■□□□ 1.18
GPN3-202ENST00000537466 AIMP1Q12904 312 aaKnown RBP22.43■■□□□ 1.18
GPN3-202ENST00000537466 NBPF5PQ86XG9 351 aaPredicted RBP22.43■■□□□ 1.18
GPN3-202ENST00000537466 FAM177BA6PVY3 158 aa22.42■■□□□ 1.18
GPN3-202ENST00000537466 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
GPN3-202ENST00000537466 GIGYF2Q6Y7W6 1299 aaKnown RBP22.42■■□□□ 1.18
GPN3-202ENST00000537466 WDR63Q8IWG1 891 aa22.42■■□□□ 1.18
GPN3-202ENST00000537466 PIM2Q9P1W9 311 aa22.42■■□□□ 1.18
GPN3-202ENST00000537466 DBF4Q9UBU7 674 aaPredicted RBP22.42■■□□□ 1.18
GPN3-202ENST00000537466 ARFGEF2Q9Y6D5 1785 aa22.42■■□□□ 1.18
GPN3-202ENST00000537466 NPHP1O15259 732 aa22.41■■□□□ 1.18
GPN3-202ENST00000537466 BRIP1Q9BX63 1249 aa22.41■■□□□ 1.18
GPN3-202ENST00000537466 UBN2Q6ZU65 1347 aa22.41■■□□□ 1.18
GPN3-202ENST00000537466 GPTP24298 496 aa22.41■■□□□ 1.18
GPN3-202ENST00000537466 C2CD5Q86YS7 1000 aa22.41■■□□□ 1.18
GPN3-202ENST00000537466 TNRC6CQ9HCJ0 1690 aaKnown RBP22.4■■□□□ 1.18
GPN3-202ENST00000537466 FANCIQ9NVI1 1328 aa22.4■■□□□ 1.18
GPN3-202ENST00000537466 ST5P78524 1137 aa22.4■■□□□ 1.18
GPN3-202ENST00000537466 ZNF34Q8IZ26 560 aa22.4■■□□□ 1.18
GPN3-202ENST00000537466 SPINK5Q9NQ38 1064 aaPredicted RBP22.4■■□□□ 1.18
GPN3-202ENST00000537466 H0YIN7 160 aa22.38■■□□□ 1.17
GPN3-202ENST00000537466 PDE6BP35913 854 aa22.38■■□□□ 1.17
GPN3-202ENST00000537466 DALRD3Q5D0E6 543 aaKnown RBP22.38■■□□□ 1.17
GPN3-202ENST00000537466 TPTE2Q6XPS3 522 aa22.38■■□□□ 1.17
GPN3-202ENST00000537466 HYPKQ9NX55 129 aa22.37■■□□□ 1.17
GPN3-202ENST00000537466 TWISTNBQ3B726 338 aaPredicted RBP22.36■■□□□ 1.17
GPN3-202ENST00000537466 SUSD4Q5VX71 490 aa22.36■■□□□ 1.17
GPN3-202ENST00000537466 MIER1Q8N108 512 aa22.36■■□□□ 1.17
GPN3-202ENST00000537466 PHAXQ9H814 394 aaKnown RBP22.36■■□□□ 1.17
GPN3-202ENST00000537466 ZNF521Q96K83 1311 aa22.36■■□□□ 1.17
GPN3-202ENST00000537466 SLX4Q8IY92 1834 aa22.36■■□□□ 1.17
GPN3-202ENST00000537466 ABCC12Q96J65 1359 aa22.36■■□□□ 1.17
GPN3-202ENST00000537466 CACNA1FO60840 1977 aa22.35■■□□□ 1.17
GPN3-202ENST00000537466 NUTM1Q86Y26 1132 aa22.35■■□□□ 1.17
GPN3-202ENST00000537466 SBF1O95248 1867 aa22.35■■□□□ 1.17
GPN3-202ENST00000537466 IBTKQ9P2D0 1353 aaPredicted RBP22.35■■□□□ 1.17
GPN3-202ENST00000537466 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
GPN3-202ENST00000537466 NYXQ9GZU5 481 aa22.34■■□□□ 1.17
GPN3-202ENST00000537466 GTF2E1P29083 439 aaPredicted RBP22.34■■□□□ 1.17
GPN3-202ENST00000537466 ERFEQ4G0M1 354 aa22.34■■□□□ 1.17
GPN3-202ENST00000537466 ANKRD13DQ6ZTN6 518 aa22.34■■□□□ 1.17
GPN3-202ENST00000537466 PLBD2Q8NHP8 589 aa22.34■■□□□ 1.17
GPN3-202ENST00000537466 ZNF622Q969S3 477 aaKnown RBP eCLIP22.34■■□□□ 1.17
GPN3-202ENST00000537466 PDZRN3Q9UPQ7 1066 aa22.34■■□□□ 1.17
GPN3-202ENST00000537466 LAMB2P55268 1798 aa22.33■■□□□ 1.17
GPN3-202ENST00000537466 TCERG1O14776 1098 aaKnown RBP22.33■■□□□ 1.16
GPN3-202ENST00000537466 NTSR2O95665 410 aa22.33■■□□□ 1.16
GPN3-202ENST00000537466 SRGNP10124 158 aa22.33■■□□□ 1.16
GPN3-202ENST00000537466 TCIRG1Q13488 830 aa22.33■■□□□ 1.16
GPN3-202ENST00000537466 TTLL6Q8N841 843 aa22.33■■□□□ 1.16
GPN3-202ENST00000537466 CCDC88AQ3V6T2 1871 aa22.32■■□□□ 1.16
GPN3-202ENST00000537466 EXOSC9Q06265 439 aaKnown RBP22.32■■□□□ 1.16
GPN3-202ENST00000537466 HSP90AB3PQ58FF7 597 aa22.32■■□□□ 1.16
GPN3-202ENST00000537466 ARHGAP27Q6ZUM4 889 aa22.32■■□□□ 1.16
GPN3-202ENST00000537466 KLRG2A4D1S0 409 aaPredicted RBP22.31■■□□□ 1.16
GPN3-202ENST00000537466 GOLGA2Q08379 1002 aa22.31■■□□□ 1.16
GPN3-202ENST00000537466 PARP10Q53GL7 1025 aa22.31■■□□□ 1.16
GPN3-202ENST00000537466 PPP1R42Q7Z4L9 355 aa22.3■■□□□ 1.16
GPN3-202ENST00000537466 NLRP10Q86W26 655 aa22.3■■□□□ 1.16
GPN3-202ENST00000537466 FER1L6Q2WGJ9 1857 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms