RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 ATP2B4P23634 1241 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 YY1P25490 414 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 NFX1Q12986 1120 aaKnown RBP6.46□□□□□ -1.38
SNHG1-203ENST00000537024 USP4Q13107 963 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 C4orf48Q5BLP8 95 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 PHLDB3Q6NSJ2 640 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 FGD6Q6ZV73 1430 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 TXNDC2Q86VQ3 553 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 ANKLE2Q86XL3 938 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 CCDC125Q86Z20 511 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 TOR4AQ9NXH8 423 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 GMPR2Q9P2T1 348 aaKnown RBP6.46□□□□□ -1.38
SNHG1-203ENST00000537024 STK17AQ9UEE5 414 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 PCDHB11Q9Y5F2 797 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 SPATA31A6Q5VVP1 1343 aa6.46□□□□□ -1.38
SNHG1-203ENST00000537024 ATP7AQ04656 1500 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 WIPF1O43516 503 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 SEC13P55735 322 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 SH3BP2P78314 561 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 MEX3CQ5U5Q3 659 aaKnown RBP6.45□□□□□ -1.38
SNHG1-203ENST00000537024 EFCAB2Q5VUJ9 269 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 CCDC102BQ68D86 513 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 SEPT12Q8IYM1 358 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 FAM9AQ8IZU1 332 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-203ENST00000537024 SIX5Q8N196 739 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 C1QTNF2Q9BXJ5 285 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 ARHGAP5Q13017 1502 aa6.45□□□□□ -1.38
SNHG1-203ENST00000537024 NWD1Q149M9 1564 aa6.44□□□□□ -1.38
SNHG1-203ENST00000537024 C11orf95C9JLR9 678 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-203ENST00000537024 ZBTB7BO15156 539 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-203ENST00000537024 RBM25P49756 843 aaKnown RBP6.44□□□□□ -1.38
SNHG1-203ENST00000537024 TRMT44Q8IYL2 757 aaKnown RBP6.44□□□□□ -1.38
SNHG1-203ENST00000537024 TPCN2Q8NHX9 752 aa6.44□□□□□ -1.38
SNHG1-203ENST00000537024 SLAIN2Q9P270 581 aa6.44□□□□□ -1.38
SNHG1-203ENST00000537024 KIAA1024Q9UPX6 916 aa6.44□□□□□ -1.38
SNHG1-203ENST00000537024 UGGT1Q9NYU2 1555 aa6.44□□□□□ -1.38
SNHG1-203ENST00000537024 TNRQ92752 1358 aa6.44□□□□□ -1.38
SNHG1-203ENST00000537024 SENP3-EIF4A1A0A087X0R7 540 aa6.43□□□□□ -1.38
SNHG1-203ENST00000537024 ESPNB1AK53 854 aa6.43□□□□□ -1.38
SNHG1-203ENST00000537024 RAB15P59190 212 aa6.43□□□□□ -1.38
SNHG1-203ENST00000537024 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
SNHG1-203ENST00000537024 FAM135AQ9P2D6 1515 aa6.43□□□□□ -1.38
SNHG1-203ENST00000537024 CDC42BPBQ9Y5S2 1711 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 NLRP1Q9C000 1473 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 SFI1A8K8P3 1242 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 AXIN1O15169 862 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 PRMT3O60678 531 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 DKK1O94907 266 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 MYCP01106 439 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-203ENST00000537024 RPIAP49247 311 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-203ENST00000537024 KCTD15Q96SI1 283 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-203ENST00000537024 HINFPQ9BQA5 517 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 PCDHGA11Q9Y5H2 935 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 TIAM1Q13009 1591 aa6.42□□□□□ -1.38
SNHG1-203ENST00000537024 BCL9LQ86UU0 1499 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 DIP2AQ14689 1571 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 SAMD9LQ8IVG5 1584 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 AHDC1Q5TGY3 1603 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-203ENST00000537024 VARSP26640 1264 aaKnown RBP6.41□□□□□ -1.38
SNHG1-203ENST00000537024 SERPINB4P48594 390 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 TRIM32Q13049 653 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 CTC1Q2NKJ3 1217 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 C1orf216Q8TAB5 229 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 AMOTL2Q9Y2J4 779 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 AFF2P51816 1311 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 PZPP20742 1482 aa6.41□□□□□ -1.38
SNHG1-203ENST00000537024 PREX2Q70Z35 1606 aa6.4□□□□□ -1.38
SNHG1-203ENST00000537024 WNT7BP56706 349 aa6.4□□□□□ -1.38
SNHG1-203ENST00000537024 RBM6P78332 1123 aaKnown RBP6.4□□□□□ -1.38
SNHG1-203ENST00000537024 VASH1Q7L8A9 365 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-203ENST00000537024 CYP4X1Q8N118 509 aa6.4□□□□□ -1.38
SNHG1-203ENST00000537024 PRIMPOLQ96LW4 560 aa6.4□□□□□ -1.38
SNHG1-203ENST00000537024 CXXC1Q9P0U4 656 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-203ENST00000537024 TMEM94Q12767 1356 aa6.4□□□□□ -1.39
SNHG1-203ENST00000537024 INO80Q9ULG1 1556 aaPredicted RBP6.4□□□□□ -1.39
SNHG1-203ENST00000537024 SOWAHDA6NJG2 315 aa6.39□□□□□ -1.39
SNHG1-203ENST00000537024 CD2BP2O95400 341 aaKnown RBP6.39□□□□□ -1.39
SNHG1-203ENST00000537024 INSM1Q01101 510 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-203ENST00000537024 INTS6LQ5JSJ4 861 aaKnown RBP6.39□□□□□ -1.39
SNHG1-203ENST00000537024 THEMISQ8N1K5 641 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-203ENST00000537024 ZNF428Q96B54 188 aa6.39□□□□□ -1.39
SNHG1-203ENST00000537024 BIN2Q9UBW5 565 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-203ENST00000537024 MAP4K5Q9Y4K4 846 aa6.39□□□□□ -1.39
SNHG1-203ENST00000537024 ERVH48-1M5A8F1 160 aa6.38□□□□□ -1.39
SNHG1-203ENST00000537024 SCNN1AP37088 669 aa6.38□□□□□ -1.39
SNHG1-203ENST00000537024 ARID5BQ14865 1188 aa6.38□□□□□ -1.39
SNHG1-203ENST00000537024 OCLNQ16625 522 aa6.38□□□□□ -1.39
SNHG1-203ENST00000537024 EHBP1Q8NDI1 1231 aa6.38□□□□□ -1.39
SNHG1-203ENST00000537024 A2MP01023 1474 aa6.38□□□□□ -1.39
SNHG1-203ENST00000537024 KDM5AP29375 1690 aaKnown RBP6.38□□□□□ -1.39
SNHG1-203ENST00000537024 ADGBQ8N7X0 1667 aa6.38□□□□□ -1.39
SNHG1-203ENST00000537024 ABCC3O15438 1527 aa6.37□□□□□ -1.39
SNHG1-203ENST00000537024 SCAF11Q99590 1463 aaKnown RBP6.37□□□□□ -1.39
SNHG1-203ENST00000537024 PRXQ9BXM0 1461 aa6.37□□□□□ -1.39
SNHG1-203ENST00000537024 E9PSI1 815 aa6.37□□□□□ -1.39
SNHG1-203ENST00000537024 M0R2N6 131 aa6.37□□□□□ -1.39
SNHG1-203ENST00000537024 LGR5O75473 907 aa6.37□□□□□ -1.39
SNHG1-203ENST00000537024 ABL1P00519 1130 aa6.37□□□□□ -1.39
SNHG1-203ENST00000537024 SKOR1P84550 965 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms