RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SLC16A10Q8TF71 515 aa10.76□□□□□ -0.69
CCDC60-203ENST00000536742 SIRT1Q96EB6 747 aa10.76□□□□□ -0.69
CCDC60-203ENST00000536742 TIAM1Q13009 1591 aa10.76□□□□□ -0.69
CCDC60-203ENST00000536742 SAMD9LQ8IVG5 1584 aa10.76□□□□□ -0.69
CCDC60-203ENST00000536742 CDC42BPBQ9Y5S2 1711 aa10.75□□□□□ -0.69
CCDC60-203ENST00000536742 PPP1R15AO75807 674 aaPredicted RBP10.75□□□□□ -0.69
CCDC60-203ENST00000536742 SKIP12755 728 aa10.75□□□□□ -0.69
CCDC60-203ENST00000536742 NFX1Q12986 1120 aaKnown RBP10.75□□□□□ -0.69
CCDC60-203ENST00000536742 INTS6LQ5JSJ4 861 aaKnown RBP10.75□□□□□ -0.69
CCDC60-203ENST00000536742 PLPP7Q8NBV4 271 aa10.75□□□□□ -0.69
CCDC60-203ENST00000536742 TFIP11Q9UBB9 837 aaKnown RBP10.75□□□□□ -0.69
CCDC60-203ENST00000536742 C6orf118Q5T5N4 469 aa10.74□□□□□ -0.69
CCDC60-203ENST00000536742 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
CCDC60-203ENST00000536742 TXNDC2Q86VQ3 553 aa10.74□□□□□ -0.69
CCDC60-203ENST00000536742 PGPEP1Q9NXJ5 209 aa10.74□□□□□ -0.69
CCDC60-203ENST00000536742 NXF1Q9UBU9 619 aaKnown RBP10.74□□□□□ -0.69
CCDC60-203ENST00000536742 DOLKQ9UPQ8 538 aa10.74□□□□□ -0.69
CCDC60-203ENST00000536742 MAFBQ9Y5Q3 323 aaPredicted RBP10.74□□□□□ -0.69
CCDC60-203ENST00000536742 USP17L5A8MUK1 530 aa10.73□□□□□ -0.69
CCDC60-203ENST00000536742 BMP2P12643 396 aa10.73□□□□□ -0.69
CCDC60-203ENST00000536742 CFAP70Q5T0N1 1121 aa10.73□□□□□ -0.69
CCDC60-203ENST00000536742 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
CCDC60-203ENST00000536742 USP21Q9UK80 565 aa10.73□□□□□ -0.69
CCDC60-203ENST00000536742 EID1Q9Y6B2 187 aa10.73□□□□□ -0.69
CCDC60-203ENST00000536742 CEP350Q5VT06 3117 aa10.73□□□□□ -0.69
CCDC60-203ENST00000536742 DIP2AQ14689 1571 aa10.73□□□□□ -0.69
CCDC60-203ENST00000536742 PIK3CDO00329 1044 aa10.72□□□□□ -0.69
CCDC60-203ENST00000536742 NKTRP30414 1462 aaKnown RBP10.72□□□□□ -0.69
CCDC60-203ENST00000536742 USP17L3A6NCW0 530 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 USP17L4A6NCW7 530 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 LTKP29376 864 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 CLIP1P30622 1438 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 USP4Q13107 963 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 EML3Q32P44 896 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 USP17L2Q6R6M4 530 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 USP17L1Q7RTZ2 530 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 PRXQ9BXM0 1461 aa10.71□□□□□ -0.69
CCDC60-203ENST00000536742 WASHC2CQ9Y4E1 1318 aa10.7□□□□□ -0.7
CCDC60-203ENST00000536742 MAN1A2O60476 641 aa10.7□□□□□ -0.7
CCDC60-203ENST00000536742 LMOD1P29536 600 aaPredicted RBP10.7□□□□□ -0.7
CCDC60-203ENST00000536742 PPP1R26Q5T8A7 1209 aaPredicted RBP10.7□□□□□ -0.7
CCDC60-203ENST00000536742 LINC00528Q8N1L1 170 aa10.7□□□□□ -0.7
CCDC60-203ENST00000536742 MEIOBQ8N635 442 aa10.7□□□□□ -0.7
CCDC60-203ENST00000536742 LRRC59Q96AG4 307 aaKnown RBP10.7□□□□□ -0.7
CCDC60-203ENST00000536742 PBXIP1Q96AQ6 731 aa10.7□□□□□ -0.7
CCDC60-203ENST00000536742 CCDC85AQ96PX6 553 aaPredicted RBP10.7□□□□□ -0.7
CCDC60-203ENST00000536742 TSEN34Q9BSV6 310 aaKnown RBP10.7□□□□□ -0.7
CCDC60-203ENST00000536742 PCDHB11Q9Y5F2 797 aa10.7□□□□□ -0.7
CCDC60-203ENST00000536742 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
CCDC60-203ENST00000536742 ATP5J2-PTCD1G3V325 749 aa10.69□□□□□ -0.7
CCDC60-203ENST00000536742 ERVH48-1M5A8F1 160 aa10.69□□□□□ -0.7
CCDC60-203ENST00000536742 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
CCDC60-203ENST00000536742 ARID3AQ99856 593 aa10.69□□□□□ -0.7
CCDC60-203ENST00000536742 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
CCDC60-203ENST00000536742 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
CCDC60-203ENST00000536742 SLIT1O75093 1534 aa10.68□□□□□ -0.7
CCDC60-203ENST00000536742 TROQ12816 1431 aaPredicted RBP10.68□□□□□ -0.7
CCDC60-203ENST00000536742 MYCP01106 439 aaPredicted RBP10.68□□□□□ -0.7
CCDC60-203ENST00000536742 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
CCDC60-203ENST00000536742 NOD1Q9Y239 953 aa10.68□□□□□ -0.7
CCDC60-203ENST00000536742 ADGBQ8N7X0 1667 aa10.68□□□□□ -0.7
CCDC60-203ENST00000536742 ARHGAP23Q9P227 1491 aa10.68□□□□□ -0.7
CCDC60-203ENST00000536742 BAG6P46379 1132 aa10.67□□□□□ -0.7
CCDC60-203ENST00000536742 ERVK-9P63128 1117 aa10.67□□□□□ -0.7
CCDC60-203ENST00000536742 NCOA4Q13772 614 aa10.67□□□□□ -0.7
CCDC60-203ENST00000536742 UNC13BO14795 1591 aa10.67□□□□□ -0.7
CCDC60-203ENST00000536742 ATRNO75882 1429 aa10.67□□□□□ -0.7
CCDC60-203ENST00000536742 INO80Q9ULG1 1556 aaPredicted RBP10.66□□□□□ -0.7
CCDC60-203ENST00000536742 ATP1A2P50993 1020 aa10.66□□□□□ -0.7
CCDC60-203ENST00000536742 R3HDM1Q15032 1099 aaKnown RBP10.66□□□□□ -0.7
CCDC60-203ENST00000536742 CC2D2BQ6DHV5 1058 aa10.66□□□□□ -0.7
CCDC60-203ENST00000536742 IRF7Q92985 503 aa10.66□□□□□ -0.7
CCDC60-203ENST00000536742 VRTNQ9H8Y1 702 aa10.66□□□□□ -0.7
CCDC60-203ENST00000536742 UBR1Q8IWV7 1749 aa10.66□□□□□ -0.7
CCDC60-203ENST00000536742 NCOA2Q15596 1464 aa10.66□□□□□ -0.7
CCDC60-203ENST00000536742 NCOA3Q9Y6Q9 1424 aa10.66□□□□□ -0.7
CCDC60-203ENST00000536742 SOBPA7XYQ1 873 aa10.65□□□□□ -0.7
CCDC60-203ENST00000536742 ADAMTS2O95450 1211 aa10.65□□□□□ -0.7
CCDC60-203ENST00000536742 RAB15P59190 212 aa10.65□□□□□ -0.7
CCDC60-203ENST00000536742 RTEL1-TNFRSF6BF6WH68 1400 aa10.65□□□□□ -0.7
CCDC60-203ENST00000536742 NINLQ9Y2I6 1382 aa10.65□□□□□ -0.71
CCDC60-203ENST00000536742 ACIN1Q9UKV3 1341 aaKnown RBP10.64□□□□□ -0.71
CCDC60-203ENST00000536742 VEGFBP49765 207 aa10.64□□□□□ -0.71
CCDC60-203ENST00000536742 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
CCDC60-203ENST00000536742 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
CCDC60-203ENST00000536742 WIPF1O43516 503 aa10.63□□□□□ -0.71
CCDC60-203ENST00000536742 ATF3P18847 181 aa10.63□□□□□ -0.71
CCDC60-203ENST00000536742 INSM1Q01101 510 aaPredicted RBP10.63□□□□□ -0.71
CCDC60-203ENST00000536742 CBLBQ13191 982 aa10.63□□□□□ -0.71
CCDC60-203ENST00000536742 KANK4Q5T7N3 995 aaPredicted RBP10.63□□□□□ -0.71
CCDC60-203ENST00000536742 PPP1R1BQ9UD71 204 aaPredicted RBP10.63□□□□□ -0.71
CCDC60-203ENST00000536742 MKRN1Q9UHC7 482 aaKnown RBP10.63□□□□□ -0.71
CCDC60-203ENST00000536742 FAM196BA6NMK8 535 aa10.62□□□□□ -0.71
CCDC60-203ENST00000536742 H3BM21 787 aa10.62□□□□□ -0.71
CCDC60-203ENST00000536742 RFX1P22670 979 aa10.62□□□□□ -0.71
CCDC60-203ENST00000536742 HNRNPMP52272 730 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCDC60-203ENST00000536742 TSGA10IPQ3SY00 556 aa10.62□□□□□ -0.71
CCDC60-203ENST00000536742 Q6ZVU0 165 aa10.62□□□□□ -0.71
CCDC60-203ENST00000536742 BRINP3Q76B58 766 aa10.62□□□□□ -0.71
CCDC60-203ENST00000536742 MROH1Q8NDA8 1641 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms