RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ZAP70P43403 619 aa8.96□□□□□ -0.98
PRKDC-208ENST00000536710 SCARF1Q14162 830 aa8.96□□□□□ -0.98
PRKDC-208ENST00000536710 BICDL1Q6ZP65 573 aa8.96□□□□□ -0.98
PRKDC-208ENST00000536710 LYSMD3Q7Z3D4 306 aa8.96□□□□□ -0.98
PRKDC-208ENST00000536710 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
PRKDC-208ENST00000536710 SPATA31C2B4DYI2 1134 aa8.95□□□□□ -0.98
PRKDC-208ENST00000536710 BMP1P13497 986 aa8.95□□□□□ -0.98
PRKDC-208ENST00000536710 EAPPQ56P03 285 aaPredicted RBP8.95□□□□□ -0.98
PRKDC-208ENST00000536710 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
PRKDC-208ENST00000536710 TREML1Q86YW5 311 aa8.95□□□□□ -0.98
PRKDC-208ENST00000536710 EDEM1Q92611 657 aa8.95□□□□□ -0.98
PRKDC-208ENST00000536710 CITED4Q96RK1 184 aa8.95□□□□□ -0.98
PRKDC-208ENST00000536710 NEUROD4Q9HD90 331 aa8.95□□□□□ -0.98
PRKDC-208ENST00000536710 POLIQ9UNA4 740 aa8.95□□□□□ -0.98
PRKDC-208ENST00000536710 FIGNL2A6NMB9 653 aa8.94□□□□□ -0.98
PRKDC-208ENST00000536710 TTLL8A6PVC2 850 aa8.94□□□□□ -0.98
PRKDC-208ENST00000536710 RHOQP17081 205 aa8.94□□□□□ -0.98
PRKDC-208ENST00000536710 PDE3BQ13370 1112 aa8.94□□□□□ -0.98
PRKDC-208ENST00000536710 HIF1AQ16665 826 aa8.94□□□□□ -0.98
PRKDC-208ENST00000536710 TTC16Q8NEE8 873 aa8.94□□□□□ -0.98
PRKDC-208ENST00000536710 MRRFQ96E11 262 aaKnown RBP8.94□□□□□ -0.98
PRKDC-208ENST00000536710 ZDHHC3Q9NYG2 299 aa8.94□□□□□ -0.98
PRKDC-208ENST00000536710 PCSK2P16519 638 aa8.93□□□□□ -0.98
PRKDC-208ENST00000536710 ARSJQ5FYB0 599 aaPredicted RBP8.93□□□□□ -0.98
PRKDC-208ENST00000536710 GPR152Q8TDT2 470 aa8.93□□□□□ -0.98
PRKDC-208ENST00000536710 TIMMDC1Q9NPL8 285 aa8.93□□□□□ -0.98
PRKDC-208ENST00000536710 RGS20O76081 388 aa8.92□□□□□ -0.98
PRKDC-208ENST00000536710 MZF1P28698 734 aaPredicted RBP8.92□□□□□ -0.98
PRKDC-208ENST00000536710 PLCB3Q01970 1234 aa8.92□□□□□ -0.98
PRKDC-208ENST00000536710 TAGLNQ01995 201 aaKnown RBP8.92□□□□□ -0.98
PRKDC-208ENST00000536710 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
PRKDC-208ENST00000536710 HSH2DQ96JZ2 352 aa8.92□□□□□ -0.98
PRKDC-208ENST00000536710 SUSD3Q96L08 255 aa8.92□□□□□ -0.98
PRKDC-208ENST00000536710 DMRTB1Q96MA1 342 aa8.92□□□□□ -0.98
PRKDC-208ENST00000536710 BCL11AQ9H165 835 aa8.92□□□□□ -0.98
PRKDC-208ENST00000536710 MICAL2O94851 1124 aa8.91□□□□□ -0.98
PRKDC-208ENST00000536710 P4HBP07237 508 aaKnown RBP8.91□□□□□ -0.98
PRKDC-208ENST00000536710 USP5P45974 858 aa8.91□□□□□ -0.98
PRKDC-208ENST00000536710 MAPK8P45983 427 aa8.91□□□□□ -0.98
PRKDC-208ENST00000536710 FBXO33Q7Z6M2 555 aa8.91□□□□□ -0.98
PRKDC-208ENST00000536710 FAM13BQ9NYF5 915 aa8.91□□□□□ -0.98
PRKDC-208ENST00000536710 BCS1LQ9Y276 419 aa8.91□□□□□ -0.98
PRKDC-208ENST00000536710 TGFBR3LH3BV60 316 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 TREHO43280 583 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 PDGFAP04085 211 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 COL19A1Q14993 1142 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 C8orf34Q49A92 452 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 WDR44Q5JSH3 913 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 ZNF280CQ8ND82 737 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 NUDT16Q96DE0 195 aaKnown RBP8.9□□□□□ -0.98
PRKDC-208ENST00000536710 ANKIB1Q9P2G1 1089 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 GJA3Q9Y6H8 435 aa8.9□□□□□ -0.98
PRKDC-208ENST00000536710 A0A1B0GTH6 734 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 GPR182O15218 404 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 AVPP01185 164 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 ATP4AP20648 1035 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 MSX1P28360 303 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 EHHADHQ08426 723 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 LRRC69Q6ZNQ3 347 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 FAM129BQ96TA1 746 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 NIF3L1Q9GZT8 377 aa8.89□□□□□ -0.99
PRKDC-208ENST00000536710 AXIN1O15169 862 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 GFRA3O60609 400 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 IDH3AP50213 366 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 CTC1Q2NKJ3 1217 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 TRIM46Q7Z4K8 759 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 GJD3Q8N144 294 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 PIK3R5Q8WYR1 880 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 KLRG1Q96E93 195 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 ZFP42Q96MM3 310 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 GPAMQ9HCL2 828 aa8.88□□□□□ -0.99
PRKDC-208ENST00000536710 KIAA1522Q9P206 1035 aaPredicted RBP8.88□□□□□ -0.99
PRKDC-208ENST00000536710 GPC6Q9Y625 555 aaPredicted RBP8.88□□□□□ -0.99
PRKDC-208ENST00000536710 SOS2Q07890 1332 aaPredicted RBP8.87□□□□□ -0.99
PRKDC-208ENST00000536710 DGAT1O75907 488 aa8.87□□□□□ -0.99
PRKDC-208ENST00000536710 FMR1Q06787 632 aaKnown RBP eCLIP8.87□□□□□ -0.996e-11■■■■■ 30.9
PRKDC-208ENST00000536710 C7orf43Q8WVR3 580 aa8.87□□□□□ -0.99
PRKDC-208ENST00000536710 ZIC5Q96T25 663 aa8.87□□□□□ -0.99
PRKDC-208ENST00000536710 LDHBP07195 334 aaKnown RBP8.86□□□□□ -0.99
PRKDC-208ENST00000536710 ATP2B2Q01814 1243 aa8.86□□□□□ -0.99
PRKDC-208ENST00000536710 DSC3Q14574 896 aa8.86□□□□□ -0.99
PRKDC-208ENST00000536710 IER5Q5VY09 327 aa8.86□□□□□ -0.99
PRKDC-208ENST00000536710 GAS2L1Q99501 681 aaPredicted RBP8.86□□□□□ -0.99
PRKDC-208ENST00000536710 USP20Q9Y2K6 914 aa8.86□□□□□ -0.99
PRKDC-208ENST00000536710 A0A1W2PNR3 127 aa8.85□□□□□ -0.99
PRKDC-208ENST00000536710 A6NHS1 94 aa8.85□□□□□ -0.99
PRKDC-208ENST00000536710 OPLAHO14841 1288 aa8.85□□□□□ -0.99
PRKDC-208ENST00000536710 RPLP1P05386 114 aaKnown RBP8.85□□□□□ -0.99
PRKDC-208ENST00000536710 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
PRKDC-208ENST00000536710 ARSDP51689 593 aa8.85□□□□□ -0.99
PRKDC-208ENST00000536710 BTLAQ7Z6A9 289 aa8.85□□□□□ -0.99
PRKDC-208ENST00000536710 PGBD3Q8N328 593 aa8.85□□□□□ -0.99
PRKDC-208ENST00000536710 RUBCNLQ9H714 662 aa8.85□□□□□ -0.99
PRKDC-208ENST00000536710 MAN1A2O60476 641 aa8.84□□□□□ -0.99
PRKDC-208ENST00000536710 IGHA2P01877 340 aa8.84□□□□□ -0.99
PRKDC-208ENST00000536710 FGD1P98174 961 aa8.84□□□□□ -0.99
PRKDC-208ENST00000536710 XPCQ01831 940 aaPredicted RBP8.84□□□□□ -0.99
PRKDC-208ENST00000536710 CMTR1Q8N1G2 835 aaKnown RBP8.84□□□□□ -0.99
PRKDC-208ENST00000536710 ALKBH8Q96BT7 664 aaKnown RBP8.84□□□□□ -0.99
PRKDC-208ENST00000536710 CEP63Q96MT8 703 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms