RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SWI5Q1ZZU3 235 aa10.4□□□□□ -0.74
CLIP1-207ENST00000536634 BICDL1Q6ZP65 573 aa10.4□□□□□ -0.74
CLIP1-207ENST00000536634 SLAIN2Q9P270 581 aa10.4□□□□□ -0.74
CLIP1-207ENST00000536634 PRMT3O60678 531 aa10.39□□□□□ -0.75
CLIP1-207ENST00000536634 PPP1R15AO75807 674 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-207ENST00000536634 SUZ12Q15022 739 aaKnown RBP10.39□□□□□ -0.75
CLIP1-207ENST00000536634 NLRP8Q86W28 1048 aa10.39□□□□□ -0.75
CLIP1-207ENST00000536634 NGLY1Q96IV0 654 aa10.39□□□□□ -0.75
CLIP1-207ENST00000536634 TRERF1Q96PN7 1200 aa10.39□□□□□ -0.75
CLIP1-207ENST00000536634 ZCCHC2Q9C0B9 1178 aaKnown RBP10.39□□□□□ -0.75
CLIP1-207ENST00000536634 NDFIP2Q9NV92 336 aa10.39□□□□□ -0.75
CLIP1-207ENST00000536634 OCLNQ16625 522 aa10.38□□□□□ -0.75
CLIP1-207ENST00000536634 C1orf53Q5VUE5 145 aa10.38□□□□□ -0.75
CLIP1-207ENST00000536634 ALDH16A1Q8IZ83 802 aa10.38□□□□□ -0.75
CLIP1-207ENST00000536634 RHPN1Q8TCX5 695 aa10.38□□□□□ -0.75
CLIP1-207ENST00000536634 ABHD17AQ96GS6 310 aa10.38□□□□□ -0.75
CLIP1-207ENST00000536634 HCN2Q9UL51 889 aa10.38□□□□□ -0.75
CLIP1-207ENST00000536634 BNIP3LO60238 219 aa10.37□□□□□ -0.75
CLIP1-207ENST00000536634 LRRC69Q6ZNQ3 347 aa10.37□□□□□ -0.75
CLIP1-207ENST00000536634 FKBP5Q13451 457 aaPredicted RBP10.36□□□□□ -0.75
CLIP1-207ENST00000536634 CFHR5Q9BXR6 569 aa10.36□□□□□ -0.75
CLIP1-207ENST00000536634 ATXN7O15265 892 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-207ENST00000536634 FOXO3O43524 673 aa10.35□□□□□ -0.75
CLIP1-207ENST00000536634 FIGNL1Q6PIW4 674 aa10.35□□□□□ -0.75
CLIP1-207ENST00000536634 HSH2DQ96JZ2 352 aa10.35□□□□□ -0.75
CLIP1-207ENST00000536634 MBIPQ9NS73 344 aa10.35□□□□□ -0.75
CLIP1-207ENST00000536634 PCDHGC4Q9Y5F7 938 aa10.35□□□□□ -0.75
CLIP1-207ENST00000536634 GJA3Q9Y6H8 435 aa10.35□□□□□ -0.75
CLIP1-207ENST00000536634 DCDC2BA2VCK2 349 aa10.34□□□□□ -0.75
CLIP1-207ENST00000536634 ZNF280CQ8ND82 737 aa10.34□□□□□ -0.75
CLIP1-207ENST00000536634 CLP1Q92989 425 aaKnown RBP10.34□□□□□ -0.75
CLIP1-207ENST00000536634 ATXN7L1Q9ULK2 861 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-207ENST00000536634 GPC6Q9Y625 555 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-207ENST00000536634 CARNS1A5YM72 827 aa10.33□□□□□ -0.76
CLIP1-207ENST00000536634 TMEM88BA6NKF7 163 aa10.33□□□□□ -0.76
CLIP1-207ENST00000536634 ADAMTS2O95450 1211 aa10.33□□□□□ -0.76
CLIP1-207ENST00000536634 QTRT2Q9H974 415 aaKnown RBP10.33□□□□□ -0.76
CLIP1-207ENST00000536634 CXXC1Q9P0U4 656 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-207ENST00000536634 PHF24Q9UPV7 400 aa10.33□□□□□ -0.76
CLIP1-207ENST00000536634 ERCC6Q03468 1493 aa10.33□□□□□ -0.76
CLIP1-207ENST00000536634 IGF1RP08069 1367 aa10.32□□□□□ -0.76
CLIP1-207ENST00000536634 SLURP2P0DP57 97 aa10.32□□□□□ -0.76
CLIP1-207ENST00000536634 MAPTP10636 758 aaKnown RBP10.32□□□□□ -0.76
CLIP1-207ENST00000536634 MX2P20592 715 aa10.32□□□□□ -0.76
CLIP1-207ENST00000536634 SRSF11Q05519 484 aaKnown RBP10.32□□□□□ -0.76
CLIP1-207ENST00000536634 TNP2Q05952 138 aa10.32□□□□□ -0.76
CLIP1-207ENST00000536634 SAMD5Q5TGI4 173 aa10.32□□□□□ -0.76
CLIP1-207ENST00000536634 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
CLIP1-207ENST00000536634 SUSD3Q96L08 255 aa10.32□□□□□ -0.76
CLIP1-207ENST00000536634 C2CD2LO14523 706 aa10.31□□□□□ -0.76
CLIP1-207ENST00000536634 KHNYNO15037 678 aaKnown RBP10.31□□□□□ -0.76
CLIP1-207ENST00000536634 FAM157BP0CG42 384 aa10.31□□□□□ -0.76
CLIP1-207ENST00000536634 FGFR3P22607 806 aa10.31□□□□□ -0.76
CLIP1-207ENST00000536634 CTBSQ01459 385 aa10.31□□□□□ -0.76
CLIP1-207ENST00000536634 RTN1Q16799 776 aa10.31□□□□□ -0.76
CLIP1-207ENST00000536634 CAPN12Q6ZSI9 719 aa10.31□□□□□ -0.76
CLIP1-207ENST00000536634 WHAMMQ8TF30 809 aa10.31□□□□□ -0.76
CLIP1-207ENST00000536634 VTI1AQ96AJ9 217 aa10.3□□□□□ -0.76
CLIP1-207ENST00000536634 MKNK1Q9BUB5 465 aa10.3□□□□□ -0.76
CLIP1-207ENST00000536634 NEUROD4Q9HD90 331 aa10.3□□□□□ -0.76
CLIP1-207ENST00000536634 STRN4Q9NRL3 753 aa10.3□□□□□ -0.76
CLIP1-207ENST00000536634 EFSO43281 561 aa10.29□□□□□ -0.76
CLIP1-207ENST00000536634 CD33P20138 364 aa10.29□□□□□ -0.76
CLIP1-207ENST00000536634 KLK14Q9P0G3 267 aa10.29□□□□□ -0.76
CLIP1-207ENST00000536634 BCS1LQ9Y276 419 aa10.29□□□□□ -0.76
CLIP1-207ENST00000536634 ATP2B4P23634 1241 aa10.28□□□□□ -0.76
CLIP1-207ENST00000536634 DGKZQ13574 1117 aa10.27□□□□□ -0.77
CLIP1-207ENST00000536634 GRIN2CQ14957 1233 aa10.27□□□□□ -0.77
CLIP1-207ENST00000536634 ZNF385CQ66K41 422 aaPredicted RBP10.27□□□□□ -0.77
CLIP1-207ENST00000536634 ANKIB1Q9P2G1 1089 aa10.27□□□□□ -0.77
CLIP1-207ENST00000536634 LRFN2Q9ULH4 789 aa10.27□□□□□ -0.77
CLIP1-207ENST00000536634 BMP4P12644 408 aa10.26□□□□□ -0.77
CLIP1-207ENST00000536634 SCNN1AP37088 669 aa10.26□□□□□ -0.77
CLIP1-207ENST00000536634 TYRO3Q06418 890 aa10.26□□□□□ -0.77
CLIP1-207ENST00000536634 LYPD4Q6UWN0 246 aa10.26□□□□□ -0.77
CLIP1-207ENST00000536634 ACDQ96AP0 544 aa10.26□□□□□ -0.77
CLIP1-207ENST00000536634 MYO19Q96H55 970 aa10.26□□□□□ -0.77
CLIP1-207ENST00000536634 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
CLIP1-207ENST00000536634 SAP130Q9H0E3 1048 aa10.26□□□□□ -0.77
CLIP1-207ENST00000536634 SFSWAPQ12872 951 aaKnown RBP10.25□□□□□ -0.77
CLIP1-207ENST00000536634 COX20Q5RI15 118 aa10.25□□□□□ -0.77
CLIP1-207ENST00000536634 BTLAQ7Z6A9 289 aa10.25□□□□□ -0.77
CLIP1-207ENST00000536634 MAP2K3P46734 347 aa10.24□□□□□ -0.77
CLIP1-207ENST00000536634 NAA30Q147X3 362 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-207ENST00000536634 DMGDHQ9UI17 866 aaKnown RBP10.24□□□□□ -0.77
CLIP1-207ENST00000536634 NSFL1CQ9UNZ2 370 aaKnown RBP10.24□□□□□ -0.77
CLIP1-207ENST00000536634 TGFBR3LH3BV60 316 aa10.23□□□□□ -0.77
CLIP1-207ENST00000536634 LAMC2Q13753 1193 aa10.23□□□□□ -0.77
CLIP1-207ENST00000536634 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
CLIP1-207ENST00000536634 COL26A1Q96A83 441 aa10.23□□□□□ -0.77
CLIP1-207ENST00000536634 BRD7Q9NPI1 651 aa10.23□□□□□ -0.77
CLIP1-207ENST00000536634 MARK1Q9P0L2 795 aa10.23□□□□□ -0.77
CLIP1-207ENST00000536634 NCAPD3P42695 1498 aa10.23□□□□□ -0.77
CLIP1-207ENST00000536634 NESP48681 1621 aa10.22□□□□□ -0.77
CLIP1-207ENST00000536634 CELA2BP08218 269 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-207ENST00000536634 HIF1AQ16665 826 aa10.22□□□□□ -0.77
CLIP1-207ENST00000536634 C11orf91Q3C1V1 193 aa10.22□□□□□ -0.77
CLIP1-207ENST00000536634 FAM182BQ5T319 152 aa10.22□□□□□ -0.77
CLIP1-207ENST00000536634 IER5Q5VY09 327 aa10.22□□□□□ -0.77
CLIP1-207ENST00000536634 RETREG2Q8NC44 543 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms