RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 SBF1O95248 1867 aa17.36■□□□□ 0.37
MRPS35-202ENST00000536569 STYK1Q6J9G0 422 aa17.36■□□□□ 0.37
MRPS35-202ENST00000536569 TPTE2Q6XPS3 522 aa17.36■□□□□ 0.37
MRPS35-202ENST00000536569 NBPF5PQ86XG9 351 aaPredicted RBP17.36■□□□□ 0.37
MRPS35-202ENST00000536569 ZNF622Q969S3 477 aaKnown RBP eCLIP17.36■□□□□ 0.37
MRPS35-202ENST00000536569 ERVV-1B6SEH8 477 aa17.35■□□□□ 0.37
MRPS35-202ENST00000536569 SRGNP10124 158 aa17.35■□□□□ 0.37
MRPS35-202ENST00000536569 RIPK4P57078 832 aa17.35■□□□□ 0.37
MRPS35-202ENST00000536569 MASTLQ96GX5 879 aa17.35■□□□□ 0.37
MRPS35-202ENST00000536569 ERBB4Q15303 1308 aa17.35■□□□□ 0.37
MRPS35-202ENST00000536569 KLRG2A4D1S0 409 aaPredicted RBP17.34■□□□□ 0.37
MRPS35-202ENST00000536569 SOGA3Q5TF21 947 aa17.34■□□□□ 0.37
MRPS35-202ENST00000536569 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
MRPS35-202ENST00000536569 TMPOP42166 694 aaKnown RBP17.33■□□□□ 0.36
MRPS35-202ENST00000536569 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
MRPS35-202ENST00000536569 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
MRPS35-202ENST00000536569 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
MRPS35-202ENST00000536569 LTBP3Q9NS15 1303 aa17.32■□□□□ 0.36
MRPS35-202ENST00000536569 RASSF7Q02833 373 aa17.32■□□□□ 0.36
MRPS35-202ENST00000536569 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
MRPS35-202ENST00000536569 MAP3K15Q6ZN16 1313 aa17.31■□□□□ 0.36
MRPS35-202ENST00000536569 COL11A2P13942 1736 aaPredicted RBP17.31■□□□□ 0.36
MRPS35-202ENST00000536569 NFKBIEO00221 500 aa17.31■□□□□ 0.36
MRPS35-202ENST00000536569 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
MRPS35-202ENST00000536569 C16orf71Q8IYS4 520 aaPredicted RBP17.31■□□□□ 0.36
MRPS35-202ENST00000536569 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
MRPS35-202ENST00000536569 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
MRPS35-202ENST00000536569 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
MRPS35-202ENST00000536569 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
MRPS35-202ENST00000536569 C21orf2O43822 256 aa17.3■□□□□ 0.36
MRPS35-202ENST00000536569 NPR1P16066 1061 aa17.3■□□□□ 0.36
MRPS35-202ENST00000536569 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
MRPS35-202ENST00000536569 HLFQ16534 295 aa17.3■□□□□ 0.36
MRPS35-202ENST00000536569 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
MRPS35-202ENST00000536569 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
MRPS35-202ENST00000536569 APLP1P51693 650 aa17.29■□□□□ 0.36
MRPS35-202ENST00000536569 PRELPP51888 382 aa17.29■□□□□ 0.36
MRPS35-202ENST00000536569 FSTL1Q12841 308 aa17.29■□□□□ 0.36
MRPS35-202ENST00000536569 RRP7AQ9Y3A4 280 aaKnown RBP17.29■□□□□ 0.36
MRPS35-202ENST00000536569 ARFGEF2Q9Y6D5 1785 aa17.29■□□□□ 0.36
MRPS35-202ENST00000536569 IBTKQ9P2D0 1353 aaPredicted RBP17.28■□□□□ 0.36
MRPS35-202ENST00000536569 TAOK3Q9H2K8 898 aa17.28■□□□□ 0.36
MRPS35-202ENST00000536569 FER1L6Q2WGJ9 1857 aa17.28■□□□□ 0.36
MRPS35-202ENST00000536569 GTF2E1P29083 439 aaPredicted RBP17.27■□□□□ 0.36
MRPS35-202ENST00000536569 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
MRPS35-202ENST00000536569 DPY19L2Q6NUT2 758 aa17.27■□□□□ 0.36
MRPS35-202ENST00000536569 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
MRPS35-202ENST00000536569 RRAGCQ9HB90 399 aa17.27■□□□□ 0.36
MRPS35-202ENST00000536569 CEP350Q5VT06 3117 aa17.27■□□□□ 0.35
MRPS35-202ENST00000536569 MYL6BP14649 208 aa17.26■□□□□ 0.35
MRPS35-202ENST00000536569 VEGFAP15692 232 aaPredicted RBP17.26■□□□□ 0.35
MRPS35-202ENST00000536569 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
MRPS35-202ENST00000536569 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
MRPS35-202ENST00000536569 C7orf43Q8WVR3 580 aa17.26■□□□□ 0.35
MRPS35-202ENST00000536569 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
MRPS35-202ENST00000536569 SLX4Q8IY92 1834 aa17.26■□□□□ 0.35
MRPS35-202ENST00000536569 CHL1O00533 1208 aa17.25■□□□□ 0.35
MRPS35-202ENST00000536569 CRY2Q49AN0 593 aa17.25■□□□□ 0.35
MRPS35-202ENST00000536569 ERFEQ4G0M1 354 aa17.25■□□□□ 0.35
MRPS35-202ENST00000536569 CCDC93Q567U6 631 aa17.25■□□□□ 0.35
MRPS35-202ENST00000536569 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
MRPS35-202ENST00000536569 ZNF34Q8IZ26 560 aa17.25■□□□□ 0.35
MRPS35-202ENST00000536569 ADAMTS8Q9UP79 889 aa17.25■□□□□ 0.35
MRPS35-202ENST00000536569 NUP98P52948 1817 aa17.25■□□□□ 0.35
MRPS35-202ENST00000536569 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
MRPS35-202ENST00000536569 DICER1Q9UPY3 1922 aaKnown RBP17.24■□□□□ 0.35
MRPS35-202ENST00000536569 PARP10Q53GL7 1025 aa17.24■□□□□ 0.35
MRPS35-202ENST00000536569 LRP10Q7Z4F1 713 aa17.24■□□□□ 0.35
MRPS35-202ENST00000536569 CCDC146Q8IYE0 955 aa17.24■□□□□ 0.35
MRPS35-202ENST00000536569 RTKN2Q8IZC4 609 aa17.24■□□□□ 0.35
MRPS35-202ENST00000536569 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
MRPS35-202ENST00000536569 CCDC88AQ3V6T2 1871 aa17.24■□□□□ 0.35
MRPS35-202ENST00000536569 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
MRPS35-202ENST00000536569 HOXB7P09629 217 aa17.23■□□□□ 0.35
MRPS35-202ENST00000536569 PDIA6Q15084 440 aa17.23■□□□□ 0.35
MRPS35-202ENST00000536569 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
MRPS35-202ENST00000536569 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
MRPS35-202ENST00000536569 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
MRPS35-202ENST00000536569 TRIM35Q9UPQ4 493 aa17.23■□□□□ 0.35
MRPS35-202ENST00000536569 EIF2S2P20042 333 aaKnown RBP17.22■□□□□ 0.35
MRPS35-202ENST00000536569 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
MRPS35-202ENST00000536569 GRIPAP1Q4V328 841 aa17.22■□□□□ 0.35
MRPS35-202ENST00000536569 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
MRPS35-202ENST00000536569 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.35
MRPS35-202ENST00000536569 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
MRPS35-202ENST00000536569 HOXA10P31260 410 aaPredicted RBP17.21■□□□□ 0.35
MRPS35-202ENST00000536569 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
MRPS35-202ENST00000536569 HSP90AB3PQ58FF7 597 aa17.21■□□□□ 0.35
MRPS35-202ENST00000536569 CC2D2BQ6DHV5 1058 aa17.21■□□□□ 0.35
MRPS35-202ENST00000536569 SUSD4Q5VX71 490 aa17.2■□□□□ 0.34
MRPS35-202ENST00000536569 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
MRPS35-202ENST00000536569 CFAP44Q96MT7 982 aa17.2■□□□□ 0.34
MRPS35-202ENST00000536569 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
MRPS35-202ENST00000536569 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
MRPS35-202ENST00000536569 ABCC12Q96J65 1359 aa17.19■□□□□ 0.34
MRPS35-202ENST00000536569 NTSR2O95665 410 aa17.19■□□□□ 0.34
MRPS35-202ENST00000536569 GPTP24298 496 aa17.19■□□□□ 0.34
MRPS35-202ENST00000536569 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
MRPS35-202ENST00000536569 CALD1Q05682 793 aaKnown RBP17.18■□□□□ 0.34
MRPS35-202ENST00000536569 PROSER3Q2NL68 480 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms