RNA–Protein interactions for RNA: ENST00000536313.2

MDM1-206, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 883 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-206ENST00000536313 TRIM52Q96A61 297 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 TUT1Q9H6E5 874 aaKnown RBP6.54□□□□□ -1.36
MDM1-206ENST00000536313 DMGDHQ9UI17 866 aaKnown RBP6.54□□□□□ -1.36
MDM1-206ENST00000536313 PCDHB15Q9Y5E8 787 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 KDM5DQ9BY66 1539 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 TMEM94Q12767 1356 aa6.54□□□□□ -1.36
MDM1-206ENST00000536313 CCDC18Q5T9S5 1454 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 PLEKHH2Q8IVE3 1493 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 LRRIQ1Q96JM4 1722 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 IQGAP1P46940 1657 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 TRIM6-TRIM34B2RNG4 842 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 SWI5Q1ZZU3 235 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 FILIP1Q7Z7B0 1213 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 GLYCTKQ8IVS8 523 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
MDM1-206ENST00000536313 RGL4Q8IZJ4 473 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 IFT57Q9NWB7 429 aa6.53□□□□□ -1.36
MDM1-206ENST00000536313 RTEL1-TNFRSF6BF6WH68 1400 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 LRP6O75581 1613 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 HOXA2O43364 376 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 S100BP04271 92 aaPredicted RBP6.52□□□□□ -1.37
MDM1-206ENST00000536313 CD46P15529 392 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 DNAJA1P31689 397 aaKnown RBP6.52□□□□□ -1.37
MDM1-206ENST00000536313 ZEB1P37275 1124 aaPredicted RBP6.52□□□□□ -1.37
MDM1-206ENST00000536313 TBX4P57082 545 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 FANCCQ00597 558 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 PTK7Q13308 1070 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 BMS1Q14692 1282 aaKnown RBP6.52□□□□□ -1.37
MDM1-206ENST00000536313 CRTC2Q53ET0 693 aaPredicted RBP6.52□□□□□ -1.37
MDM1-206ENST00000536313 PPP1R18Q6NYC8 613 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 CLEC4GQ6UXB4 293 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 RNF135Q8IUD6 432 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 CABLES1Q8TDN4 633 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 ACBD3Q9H3P7 528 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 KIAA1468Q9P260 1216 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 ADGRG1Q9Y653 693 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 CCNB3Q8WWL7 1395 aa6.52□□□□□ -1.37
MDM1-206ENST00000536313 SCAF11Q99590 1463 aaKnown RBP6.52□□□□□ -1.37
MDM1-206ENST00000536313 CDC42BPAQ5VT25 1732 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 ENPP3O14638 875 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 ABL1P00519 1130 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 NDUFV2P19404 249 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 PAX3P23760 479 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 SCNN1AP37088 669 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 CTDSPL2Q05D32 466 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 LARP1Q6PKG0 1096 aaKnown RBP6.51□□□□□ -1.37
MDM1-206ENST00000536313 LAPTM4BQ86VI4 370 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 PPARGC1BQ86YN6 1023 aaKnown RBP6.51□□□□□ -1.37
MDM1-206ENST00000536313 PNMA1Q8ND90 353 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 PNISRQ8TF01 805 aaKnown RBP6.51□□□□□ -1.37
MDM1-206ENST00000536313 WNT2BQ93097 391 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 ZBTB3Q9H5J0 574 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 GEMIN8Q9NWZ8 242 aaKnown RBP6.51□□□□□ -1.37
MDM1-206ENST00000536313 DDX56Q9NY93 547 aaKnown RBP6.51□□□□□ -1.37
MDM1-206ENST00000536313 MRPL42Q9Y6G3 142 aaKnown RBP6.51□□□□□ -1.37
MDM1-206ENST00000536313 JCADQ9P266 1359 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 NCOA2Q15596 1464 aa6.51□□□□□ -1.37
MDM1-206ENST00000536313 MAP3K1Q13233 1512 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 ZC3H13Q5T200 1668 aaKnown RBP6.5□□□□□ -1.37
MDM1-206ENST00000536313 C21orf2O43822 256 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 DNAJC6O75061 913 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 MCCP23508 829 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 RHBDL3P58872 404 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 ARID5AQ03989 594 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 ZNF211Q13398 564 aaPredicted RBP6.5□□□□□ -1.37
MDM1-206ENST00000536313 BIRC2Q13490 618 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 NFE2L2Q16236 605 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 ECM1Q16610 540 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 THSD4Q6ZMP0 1018 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 PCGF6Q9BYE7 350 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 TSKSQ9UJT2 592 aa6.5□□□□□ -1.37
MDM1-206ENST00000536313 ERVK-7P63135 1459 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 ARHGAP23Q9P227 1491 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 USP17L5A8MUK1 530 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 P4HBP07237 508 aaKnown RBP6.49□□□□□ -1.37
MDM1-206ENST00000536313 XRCC5P13010 732 aaKnown RBP6.49□□□□□ -1.37
MDM1-206ENST00000536313 PTPN5P54829 565 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 PRSS12P56730 875 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 ZNF772Q68DY9 489 aaPredicted RBP6.49□□□□□ -1.37
MDM1-206ENST00000536313 TAS1R3Q7RTX0 852 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 ANKMY2Q8IV38 441 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 STAG1Q8WVM7 1258 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 CDCA7LQ96GN5 454 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 TMX1Q9H3N1 280 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 SPC25Q9HBM1 224 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 PNMA2Q9UL42 364 aa6.49□□□□□ -1.37
MDM1-206ENST00000536313 G3BP2Q9UN86 482 aaKnown RBP6.49□□□□□ -1.37
MDM1-206ENST00000536313 PIK3CDO00329 1044 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 PRC1O43663 620 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 KCNA6P17658 529 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 RXRBP28702 533 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 TNNI2P48788 182 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 FOXD4Q12950 439 aaPredicted RBP6.48□□□□□ -1.37
MDM1-206ENST00000536313 GRIPAP1Q4V328 841 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 KRBA2Q6ZNG9 492 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 PACS2Q86VP3 889 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 FMNL3Q8IVF7 1028 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 ANKK1Q8NFD2 765 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 MRFAP1L1Q96HT8 127 aa6.48□□□□□ -1.37
MDM1-206ENST00000536313 SLC26A8Q96RN1 970 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms